Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p41800 Brassica napus HOM05D000003 ORTHO05D009772 5.0e-93 344.4 164 100.0
BolC9t57066H Brassica oleracea HOM05D000003 ORTHO05D009772 1.6e-83 312.8 149 100.0
BolC9t54890H Brassica oleracea HOM05D000003 ORTHO05D009772 2.3e-74 282.3 157 87.9
C02p54310 Brassica napus HOM05D000003 ORTHO05D009772 3.6e-67 258.5 142 88.7
C09p19850 Brassica napus HOM05D000003 ORTHO05D009772 3.0e-66 255.4 142 88.0
C02p14790 Brassica napus HOM05D000003 ORTHO05D009772 6.8e-34 147.9 139 51.1
BolC2t07608H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-34 147.9 139 51.1
C07p06100 Brassica napus HOM05D000003 ORTHO05D000004 1.1e-31 140.6 139 48.9
A01p14050 Brassica napus HOM05D000485 ORTHO05D000341 1.4e-31 140.2 140 50.7
BolC7t41023H Brassica oleracea HOM05D000003 ORTHO05D000004 4.1e-31 138.7 139 48.2
BraA09t37274Z Brassica rapa HOM05D000003 ORTHO05D009772 1.0e-29 134.0 85 76.5
C05p29390 Brassica napus HOM05D000003 ORTHO05D009772 6.8e-26 121.3 128 45.3
BolC5t31671H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-26 121.3 128 45.3
AL2G19440 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 9.9e-25 117.5 140 42.9
AL6G40320 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 9.2e-23 110.9 140 40.7
AL3G45380 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 7.8e-22 107.8 139 41.0
AT5G33330 Arabidopsis thaliana HOM05D000003 ORTHO05D009772 1.0e-21 107.5 144 41.0
AL3G45450 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.3e-20 102.4 139 36.0
AT3G60040 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 9.5e-20 100.9 130 40.0
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-19 99.4 140 36.4
AL8G21850 Arabidopsis lyrata HOM05D000328 ORTHO05D000191 1.1e-18 97.4 142 38.0
AL2G12670 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.4e-18 97.1 141 39.7
AL2G10570 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.1e-18 95.9 144 38.2
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 6.8e-18 94.7 87 54.0
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-17 94.0 140 40.0
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-17 93.6 140 35.7
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-17 93.2 144 34.0
BcaB06g27632 Brassica carinata HOM05D000003 ORTHO05D009772 4.4e-17 92.0 77 55.8
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.8e-17 91.7 140 33.6
Aa31LG2G17780 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.7e-16 90.1 143 35.0
BolC7t43567H Brassica oleracea HOM05D000003 ORTHO05D009772 1.7e-16 90.1 140 34.3
Aa31LG7G9420 Aethionema arabicum HOM05D000003 ORTHO05D009772 4.9e-16 88.6 143 32.2
C08p15950 Brassica napus HOM05D000003 ORTHO05D009772 6.4e-16 88.2 143 35.7
BolC6t38377H Brassica oleracea HOM05D000003 ORTHO05D009772 6.4e-16 88.2 154 34.4
Aa31sc77G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 8.4e-16 87.8 146 33.6
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-15 87.0 141 34.8
AL8G19200 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.4e-15 87.0 142 36.6
Aa31LG4G11770 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-15 86.7 140 32.9
Aa31LG5G23610 Aethionema arabicum HOM05D000003 ORTHO05D000411 1.9e-15 86.7 145 35.2
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-15 86.7 140 33.6
BcaB02g10745 Brassica carinata HOM05D000003 ORTHO05D009772 1.9e-15 86.7 141 34.0
Aa31LG2G15460 Aethionema arabicum HOM05D000003 ORTHO05D000411 2.4e-15 86.3 140 30.0
Aa31sc730G50 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.4e-15 86.3 140 32.1
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-15 85.9 156 34.0
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-15 85.9 140 30.7
BraA01t02856Z Brassica rapa HOM05D000003 ORTHO05D009772 3.2e-15 85.9 140 38.6
Aa31LG11G7720 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-15 85.5 141 31.2
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-15 85.5 144 34.7
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-15 85.1 142 30.3
Aa31sc200G60 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.4e-15 85.1 140 37.1
Aa31sc118G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.1e-15 84.7 143 34.3
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.1e-15 84.7 141 33.3
Aa31LG4G19050 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.2e-14 84.0 143 32.9
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.1e-14 83.2 141 33.3
Aa31LG1G13000 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.1e-14 83.2 140 31.4
BcaC01g02466 Brassica carinata HOM05D000003 ORTHO05D009772 2.1e-14 83.2 140 33.6
Aa31sc369G20 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.7e-14 82.8 138 34.1
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-14 82.4 146 32.9
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-14 82.0 142 36.6
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-14 82.0 142 30.3
Aa31LG11G4790 Aethionema arabicum HOM05D000003 ORTHO05D009772 6.0e-14 81.6 140 35.7
Aa31LG3G5620 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.8e-14 81.3 142 32.4
Aa31LG7G3480 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.8e-14 81.3 141 34.0
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.0e-13 80.9 143 31.5
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-13 80.5 143 28.7
Aa31LG1G5430 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.3e-13 79.7 141 31.2
Aa31LG2G16890 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.0e-13 79.3 170 32.4
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.1e-13 78.6 140 34.3
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 6.6e-13 78.2 141 29.8
Aa31sc314G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-12 77.4 144 31.2
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.5e-12 77.0 149 32.2
Aa31LG7G1610 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-12 76.6 138 34.1
Aa31sc62G10 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.9e-12 76.6 142 31.7
BcaB08g35992 Brassica carinata HOM05D000003 ORTHO05D009772 1.9e-12 76.6 140 30.0
BcaNung00257 Brassica carinata HOM05D000003 ORTHO05D021580 1.9e-12 76.6 140 31.4
Sp6g13220 Schrenkiella parvula HOM05D000003 ORTHO05D000006 2.5e-12 76.3 141 33.3
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 3.3e-12 75.9 141 31.2
AL3G29100 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 4.3e-12 75.5 117 35.0
Aa31sc17G250 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.6e-12 75.1 124 35.5
Sp2g02790 Schrenkiella parvula HOM05D000003 ORTHO05D009772 5.6e-12 75.1 148 29.7
Aa31LG9G4050 Aethionema arabicum HOM05D000003 ORTHO05D009772 9.6e-12 74.3 140 29.3
C02p17900 Brassica napus HOM05D000003 ORTHO05D009772 9.6e-12 74.3 139 29.5
BolC2t07921H Brassica oleracea HOM05D000003 ORTHO05D009772 9.6e-12 74.3 139 29.5
Aa31LG1G3820 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.8e-11 72.8 141 29.1
Sp2g15540 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.8e-11 72.8 114 36.0
Aa31LG1G2610 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.6e-11 72.4 78 43.6
BcaC03g15462 Brassica carinata HOM05D000003 ORTHO05D009772 3.6e-11 72.4 138 29.7
BolC4t28430H Brassica oleracea HOM05D000003 ORTHO05D009772 3.6e-11 72.4 141 29.8
BraA01t01353Z Brassica rapa HOM05D000485 ORTHO05D000341 4.7e-11 72.0 51 64.7
Aa31LG1G1440 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.1e-10 70.9 81 39.5
Aa31LG1G2520 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.4e-10 69.7 131 30.5
Thhalv10001198m.g Eutrema salsugineum HOM05D000003 ORTHO05D009772 3.1e-10 69.3 139 31.7
Thhalv10012119m.g Eutrema salsugineum HOM05D000003 ORTHO05D009772 3.1e-10 69.3 92 38.0
BcaB02g06876 Brassica carinata HOM05D000003 ORTHO05D009772 1.2e-09 67.4 73 42.5
Sp7g09380 Schrenkiella parvula HOM05D000003 ORTHO05D009772 2.0e-09 66.6 73 41.1
BolC7t44732H Brassica oleracea HOM05D000003 ORTHO05D009772 9.9e-09 64.3 98 33.7
Aa31LG2G6440 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.3e-08 63.9 73 37.0
BcaC03g15572 Brassica carinata HOM05D000003 ORTHO05D009772 2.9e-08 62.8 71 39.4
BcaC04g20002 Brassica carinata HOM05D000003 ORTHO05D009772 2.9e-08 62.8 127 29.1
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 3.8e-08 62.4 148 29.7
BcaB01g02217 Brassica carinata HOM05D000003 ORTHO05D009772 4.9e-08 62.0 57 47.4
BolC1t03684H Brassica oleracea HOM05D001350 ORTHO05D001091 6.4e-08 61.6 132 30.3
BraA05t19427Z Brassica rapa HOM05D001350 ORTHO05D001091 6.4e-08 61.6 144 30.6
BcaC07g42246 Brassica carinata HOM05D014135 ORTHO05D016458 8.4e-08 61.2 75 37.3
BcaC06g34333 Brassica carinata HOM05D000003 ORTHO05D009772 1.1e-07 60.8 64 42.2
Thhalv10009928m.g Eutrema salsugineum HOM05D000003 ORTHO05D009772 1.1e-07 60.8 140 27.1
Sp6g38460 Schrenkiella parvula HOM05D000003 ORTHO05D009772 1.1e-07 60.8 73 41.1
Aa31LG8G11280 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.4e-07 60.5 75 36.0
Aa31sc25G150 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-07 60.5 70 38.6
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-07 59.7 127 30.7
BolC6t35388H Brassica oleracea HOM05D001239 ORTHO05D000925 3.2e-07 59.3 140 29.3
BcaB07g33905 Brassica carinata HOM05D014135 ORTHO05D016458 4.2e-07 58.9 62 41.9
BraA03t13711Z Brassica rapa HOM05D001350 ORTHO05D001091 4.2e-07 58.9 140 27.1
BcaB07g32374 Brassica carinata HOM05D000003 ORTHO05D009772 5.4e-07 58.5 78 37.2
BolC5t33811H Brassica oleracea HOM05D001350 ORTHO05D001091 5.4e-07 58.5 140 27.1
Sp6g06150 Schrenkiella parvula HOM05D000003 ORTHO05D009772 7.1e-07 58.2 75 40.0
C02p58460 Brassica napus HOM05D000003 ORTHO05D009772 9.3e-07 57.8 48 60.4
CARHR102280 Cardamine hirsuta HOM05D001350 ORTHO05D001091 1.2e-06 57.4 135 31.9
BcaC05g28305 Brassica carinata HOM05D000003 ORTHO05D001091 2.1e-06 56.6 133 28.6
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 3.5e-06 55.8 130 33.1
Sp1g33730 Schrenkiella parvula HOM05D000003 ORTHO05D009772 3.5e-06 55.8 75 30.7
BcaB04g20717 Brassica carinata HOM05D000003 ORTHO05D009772 4.6e-06 55.5 136 28.7
BolC4t22723H Brassica oleracea HOM05D000003 ORTHO05D014433 4.6e-06 55.5 130 31.5


User provided reference genes

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