Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p38940 Brassica napus HOM05D015506 ORTHO05D022024 5.7e-55 217.2 103 100.0
C02p04810 Brassica napus HOM05D015506 ORTHO05D022024 1.9e-29 132.5 77 84.4
C03p83860 Brassica napus HOM05D015506 ORTHO05D024586 2.4e-29 132.1 77 84.4
C09p41540 Brassica napus HOM05D001796 ORTHO05D001828 2.8e-25 118.6 67 86.6
BolC9t57033H Brassica oleracea HOM05D001796 ORTHO05D001828 2.8e-25 118.6 67 86.6
C05p40840 Brassica napus HOM05D001796 ORTHO05D001828 1.2e-23 113.2 77 76.6
BolC1t04198H Brassica oleracea HOM05D001796 ORTHO05D001828 5.8e-23 110.9 75 76.0
BolC3t20662H Brassica oleracea HOM05D001796 ORTHO05D001828 5.8e-23 110.9 75 76.0
BolC6t38075H Brassica oleracea HOM05D001796 ORTHO05D024586 1.0e-19 100.1 75 69.3
BolC3t15435H Brassica oleracea HOM05D015506 ORTHO05D024586 1.5e-18 96.3 75 66.7
BolC9t56768H Brassica oleracea HOM05D001796 ORTHO05D001828 2.4e-16 89.0 43 95.3
C03p30840 Brassica napus HOM05D015506 ORTHO05D024586 2.0e-15 85.9 55 78.2
BolC6t37170H Brassica oleracea HOM05D001796 ORTHO05D001828 2.0e-15 85.9 65 69.2
A03p46000 Brassica napus HOM05D000140 ORTHO05D000087 7.6e-15 84.0 89 52.8
BraA03t13729Z Brassica rapa HOM05D000140 ORTHO05D000087 7.6e-15 84.0 89 52.8
C07p38990 Brassica napus HOM05D015506 ORTHO05D022024 6.4e-14 80.9 54 74.1
BcaB08g34666 Brassica carinata HOM05D000140 ORTHO05D000087 1.1e-13 80.1 89 50.6
BolC5t33703H Brassica oleracea HOM05D001796 ORTHO05D001828 2.4e-13 79.0 59 71.2
BcaC01g02986 Brassica carinata HOM05D000140 ORTHO05D000087 3.2e-13 78.6 92 51.1
C03p57460 Brassica napus HOM05D000140 ORTHO05D000087 3.2e-13 78.6 92 51.1
BolC3t18021H Brassica oleracea HOM05D000140 ORTHO05D000087 3.2e-13 78.6 92 51.1
BolC8t48856H Brassica oleracea HOM05D015506 ORTHO05D022024 5.4e-13 77.8 75 58.7
Sp3g30000 Schrenkiella parvula HOM05D000140 ORTHO05D000087 7.1e-13 77.4 86 50.0
BolC5t32798H Brassica oleracea HOM05D001796 ORTHO05D001828 1.2e-12 76.6 65 63.1
BolC5t32861H Brassica oleracea HOM05D001796 ORTHO05D001828 2.1e-12 75.9 78 53.8
BolC2t06438H Brassica oleracea HOM05D015506 ORTHO05D022024 3.5e-12 75.1 75 57.3
BolC4t26001H Brassica oleracea HOM05D015506 ORTHO05D022024 4.6e-12 74.7 75 56.0
Thhalv10022550m.g Eutrema salsugineum HOM05D000140 ORTHO05D000087 2.3e-11 72.4 86 46.5
AL3G49450 Arabidopsis lyrata HOM05D000140 ORTHO05D000087 3.0e-11 72.0 90 45.6
BcaB03g16397 Brassica carinata HOM05D000140 ORTHO05D000087 3.9e-11 71.6 86 45.3
Carub.0003s3051 Capsella rubella HOM05D000140 ORTHO05D000087 5.1e-11 71.2 86 47.7
BcaC06g36169 Brassica carinata HOM05D000140 ORTHO05D000087 6.6e-11 70.9 86 44.2
A07p04380 Brassica napus HOM05D000140 ORTHO05D000087 6.6e-11 70.9 86 45.3
C07p07000 Brassica napus HOM05D000140 ORTHO05D000087 6.6e-11 70.9 86 44.2
BolC7t41118H Brassica oleracea HOM05D000140 ORTHO05D000087 6.6e-11 70.9 86 44.2
BraA07t28231Z Brassica rapa HOM05D000140 ORTHO05D000087 6.6e-11 70.9 86 45.3
AT2G16730 Arabidopsis thaliana HOM05D000140 ORTHO05D000087 1.9e-10 69.3 90 43.3
BcaNung00639 Brassica carinata HOM05D000140 ORTHO05D000087 3.6e-09 65.1 87 43.7
C01p03840 Brassica napus HOM05D000140 ORTHO05D000087 4.8e-09 64.7 87 42.5
A03p63230 Brassica napus HOM05D000140 ORTHO05D000087 6.2e-09 64.3 87 46.0
BraA03t15400Z Brassica rapa HOM05D000140 ORTHO05D000087 6.2e-09 64.3 87 46.0
CARHR106990 Cardamine hirsuta HOM05D000140 ORTHO05D000087 1.1e-08 63.5 91 40.7
BolC7t46515H Brassica oleracea HOM05D000140 ORTHO05D000087 1.4e-08 63.2 87 44.8
Aa31LG8G13970 Aethionema arabicum HOM05D000140 ORTHO05D000087 1.8e-08 62.8 88 43.2
BcaNung02369 Brassica carinata HOM05D000140 ORTHO05D000087 1.8e-08 62.8 87 44.8
C07p60870 Brassica napus HOM05D000140 ORTHO05D000087 1.8e-08 62.8 87 44.8
BolC1t00376H Brassica oleracea HOM05D000140 ORTHO05D000087 1.8e-08 62.8 87 41.4
Thhalv10024392m.g Eutrema salsugineum HOM05D000140 ORTHO05D000087 1.5e-07 59.7 86 41.9
Sp7g32770 Schrenkiella parvula HOM05D000140 ORTHO05D000087 2.0e-07 59.3 86 43.0
A01p03550 Brassica napus HOM05D000140 ORTHO05D000087 4.5e-07 58.2 88 40.9
AL7G16210 Arabidopsis lyrata HOM05D000140 ORTHO05D000087 7.6e-07 57.4 87 42.5
AT4G35010 Arabidopsis thaliana HOM05D000140 ORTHO05D000087 7.6e-07 57.4 87 42.5
BraA01t00340Z Brassica rapa HOM05D000140 ORTHO05D000087 1.3e-06 56.6 88 39.8
BolC1t02618H Brassica oleracea HOM05D001796 ORTHO05D027875 1.7e-06 56.2 29 93.1
Aa31LG2G15470 Aethionema arabicum HOM05D000140 ORTHO05D000087 3.8e-06 55.1 87 39.1
THA.LOC104819644 Tarenaya hassleriana HOM05D000140 ORTHO05D000087 6.4e-06 54.3 86 38.4


User provided reference genes

Program Settings