Gene: Carub.0003s3051

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3051
  • Transcript Identifier Carub.0003s3051.1
  • Gene Type Coding gene
  • Location scaffold_3 : 12917620-12921704 : negative

Gene Family Information

  • ID HOM05D000140
  • #Genes/#Species 2610/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3051.v1.1
  • pacid 39239952
  • synonym Carubv10016129m.g

Descriptions

  • Description PF02140//PF02449//PF13364 - Galactose binding lectin domain (Gal_Lectin) // Beta-galactosidase (Glyco_hydro_42) // Beta-galactosidase jelly roll domain (BetaGal_dom4_5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565
ISO
PLAZA Integrative Orthologybeta-galactosidase activity AT2G16730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041392 Beta-galactosidase, beta-sandwich domain
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
IPR008979 Galactose-binding-like domain superfamily
IPR043159 D-galactoside/L-rhamnose binding SUEL lectin domain superfamily
IPR001944 Glycoside hydrolase, family 35
IPR025300 Beta-galactosidase jelly roll domain
IPR017853 Glycoside hydrolase superfamily
IPR031330 Glycoside hydrolase 35, catalytic domain
Mapman id Description
21.3.2.2.3 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL)