Gene: AT2G16730

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G16730
  • Transcript Identifier AT2G16730.1
  • Gene Type Coding gene
  • Location Chr2 : 7261986-7266105 : negative

Gene Family Information

  • ID HOM05D000140
  • #Genes/#Species 2610/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G16730.1
  • Alias BGAL13,beta-galactosidase 13
  • uniprot Q9SCU9

Descriptions

  • Description glycosyl hydrolase family 35 protein
  • Computational description glycosyl hydrolase family 35 protein; FUNCTIONS IN: beta-galactosidase activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase family 2, carbohydrate-binding (InterPro:IPR006104), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta-galactosidase 11 (TAIR:AT4G35010.1); Has 2592 Blast hits to 2188 proteins in 502 species: Archae - 15; Bacteria - 1202; Metazoa - 413; Fungi - 220; Plants - 636; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
Gene Ontologycarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004565
IEA
GOA Databasebeta-galactosidase activity
GO:0004565
IBA
TAS
Gene Ontologybeta-galactosidase activity1 2
GO:0030246
IEA
Gene Ontologycarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0048046
IEA
GOA Databaseapoplast
GO:0005618
IBA
Gene Ontologycell wall2
GO:0005773
IBA
Gene Ontologyvacuole2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041392 Beta-galactosidase, beta-sandwich domain
IPR031330 Glycoside hydrolase 35, catalytic domain
IPR043159 D-galactoside/L-rhamnose binding SUEL lectin domain superfamily
IPR001944 Glycoside hydrolase, family 35
IPR008979 Galactose-binding-like domain superfamily
IPR017853 Glycoside hydrolase superfamily
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
Mapman id Description
21.3.2.2.3 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL)