Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p46980 Brassica napus HOM05D006443 ORTHO05D007797 3.9e-48 194.5 100 100.0
BolC8t52235H Brassica oleracea HOM05D006443 ORTHO05D007797 3.9e-48 194.5 100 100.0
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 8.4e-19 97.1 148 41.9
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 2.4e-18 95.5 56 80.4
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 1.6e-17 92.8 163 38.7
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 1.6e-17 92.8 163 38.7
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 3.5e-17 91.7 142 40.8
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 1.0e-16 90.1 146 41.1
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 2.3e-16 89.0 91 53.8
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 3.0e-16 88.6 144 38.9
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 3.0e-16 88.6 144 38.9
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 6.7e-16 87.4 154 37.0
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 1.1e-15 86.7 155 36.1
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 4.3e-15 84.7 141 39.0
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 3.7e-14 81.6 71 60.6
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 6.2e-14 80.9 50 74.0
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 6.2e-14 80.9 50 74.0
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 2.4e-13 79.0 61 62.3
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 2.4e-13 79.0 56 62.5
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 4.0e-13 78.2 50 70.0
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 4.0e-13 78.2 50 70.0
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 5.3e-13 77.8 50 72.0
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 6.9e-13 77.4 56 64.3
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 6.9e-13 77.4 55 63.6
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 6.9e-13 77.4 69 55.1
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 6.9e-13 77.4 51 66.7
Dinv17565 Davidia involucrata HOM05D006443 ORTHO05D007797 1.2e-12 76.6 48 70.8
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 1.2e-12 76.6 58 60.3
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 1.5e-12 76.3 76 51.3
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 1.5e-12 76.3 50 68.0
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 2.0e-12 75.9 50 70.0
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 2.6e-12 75.5 55 63.6
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 2.6e-12 75.5 77 51.9
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 2.6e-12 75.5 47 72.3
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 2.6e-12 75.5 50 68.0
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 3.4e-12 75.1 64 54.7
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 3.4e-12 75.1 73 50.7
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 3.4e-12 75.1 55 61.8
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 3.4e-12 75.1 77 49.4
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 4.5e-12 74.7 54 61.1
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 5.8e-12 74.3 47 74.5
DCAR_031205 Daucus carota HOM05D006443 ORTHO05D007797 5.8e-12 74.3 67 55.2
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 5.8e-12 74.3 50 62.0
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 5.8e-12 74.3 54 61.1
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 5.8e-12 74.3 68 54.4
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 7.6e-12 73.9 50 68.0
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 7.6e-12 73.9 48 68.8
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 7.6e-12 73.9 50 64.0
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 1.0e-11 73.6 71 53.5
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.0e-11 73.6 50 66.0
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 1.0e-11 73.6 53 60.4
SalBow1G6802 Salvia bowleyana HOM05D006443 ORTHO05D007797 1.0e-11 73.6 71 52.1
SalBow2G0214 Salvia bowleyana HOM05D006443 ORTHO05D007797 1.0e-11 73.6 71 52.1
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.3e-11 73.2 71 50.7
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.3e-11 73.2 71 50.7
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.3e-11 73.2 50 66.0
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 1.3e-11 73.2 55 63.6
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 1.3e-11 73.2 55 61.8
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 1.3e-11 73.2 71 53.5
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 1.7e-11 72.8 47 72.3
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 2.2e-11 72.4 50 66.0
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 2.2e-11 72.4 48 64.6
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 2.9e-11 72.0 50 66.0
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 2.9e-11 72.0 50 64.0
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 2.9e-11 72.0 50 66.0
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 2.9e-11 72.0 75 48.0
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 2.9e-11 72.0 48 66.7
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 3.8e-11 71.6 50 66.0
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 3.8e-11 71.6 46 67.4
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 3.8e-11 71.6 46 67.4
vmacro19384 Vaccinium macrocarpon HOM05D006443 ORTHO05D007797 3.8e-11 71.6 71 52.1
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 4.9e-11 71.2 69 52.2
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 4.9e-11 71.2 48 64.6
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 4.9e-11 71.2 46 65.2
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 4.9e-11 71.2 51 60.8
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 6.5e-11 70.9 50 62.0
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 6.5e-11 70.9 50 68.0
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 6.5e-11 70.9 55 60.0
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 8.4e-11 70.5 76 48.7
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 8.4e-11 70.5 48 66.7
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.1e-10 70.1 56 57.1
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 1.1e-10 70.1 49 65.3
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 1.1e-10 70.1 49 65.3
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 1.4e-10 69.7 69 49.3
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 1.4e-10 69.7 50 64.0
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 1.9e-10 69.3 55 60.0
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 1.9e-10 69.3 55 58.2
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 2.5e-10 68.9 60 53.3
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 3.2e-10 68.6 55 58.2
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 3.2e-10 68.6 55 58.2
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 3.2e-10 68.6 50 62.0
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 4.2e-10 68.2 48 64.6
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 5.5e-10 67.8 48 64.6
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 5.5e-10 67.8 55 56.4
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 7.1e-10 67.4 46 67.4
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 9.3e-10 67.0 55 58.2
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 2.1e-09 65.9 69 46.4
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 6.0e-09 64.3 41 70.7
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 6.0e-09 64.3 48 58.3
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 7.9e-09 63.9 48 56.2
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 3.0e-08 62.0 40 72.5
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 5.1e-08 61.2 71 42.3
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 1.1e-07 60.1 50 56.0
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 4.3e-07 58.2 49 49.0
C08p48190 Brassica napus HOM05D006443 ORTHO05D007797 4.3e-07 58.2 31 80.6
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 1.3e-06 56.6 38 60.5
BolC8t52352H Brassica oleracea HOM05D006443 ORTHO05D007797 1.6e-06 56.2 31 77.4
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 2.1e-06 55.8 42 54.8


User provided reference genes

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