Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p39770 Brassica napus HOM05D000268 ORTHO05D027468 2.7e-73 278.5 135 100.0
BolC8t51549H Brassica oleracea HOM05D000268 ORTHO05D027468 2.7e-73 278.5 135 100.0
BcaC07g40978 Brassica carinata HOM05D000268 ORTHO05D027468 1.5e-39 166.4 140 67.9
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 1.3e-27 126.7 120 56.7
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 1.3e-27 126.7 120 56.7
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 3.0e-27 125.6 72 77.8
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 6.6e-27 124.4 72 81.9
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 8.7e-27 124.0 83 69.9
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 8.7e-27 124.0 83 69.9
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 8.7e-27 124.0 83 69.9
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 1.5e-26 123.2 72 80.6
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 2.5e-26 122.5 72 79.2
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 2.1e-25 119.4 72 75.0
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 3.6e-25 118.6 72 75.0
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 3.4e-23 112.1 72 70.8
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 1.9e-21 106.3 72 65.3
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 5.4e-21 104.8 72 61.1
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 7.1e-21 104.4 72 59.7
A09p56810 Brassica napus HOM05D000268 ORTHO05D004469 9.3e-21 104.0 66 80.3
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 9.3e-21 104.0 85 52.9
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.2e-20 103.6 72 61.1
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 1.2e-20 103.6 72 58.3
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 1.6e-20 103.2 72 61.1
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 1.6e-20 103.2 72 59.7
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.6e-20 103.2 72 59.7
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.6e-20 103.2 72 59.7
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.6e-20 103.2 72 59.7
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 1.6e-20 103.2 120 41.7
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.1e-20 102.8 72 59.7
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.7e-20 102.4 95 49.5
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 2.7e-20 102.4 72 62.5
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 2.7e-20 102.4 83 54.2
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 3.5e-20 102.1 72 58.3
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 4.6e-20 101.7 72 59.7
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 6.0e-20 101.3 72 61.1
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 1.0e-19 100.5 72 61.1
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.0e-19 100.5 72 59.7
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.3e-19 100.1 102 44.1
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.3e-19 100.1 72 59.7
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 1.3e-19 100.1 82 54.9
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 1.3e-19 100.1 72 59.7
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.3e-19 100.1 83 54.2
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 1.8e-19 99.8 72 59.7
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.8e-19 99.8 119 42.0
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 2.3e-19 99.4 72 58.3
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 2.3e-19 99.4 72 58.3
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 3.0e-19 99.0 72 59.7
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 3.0e-19 99.0 69 62.3
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 3.0e-19 99.0 124 38.7
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 3.9e-19 98.6 120 40.8
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 3.9e-19 98.6 124 38.7
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 3.9e-19 98.6 76 52.6
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 5.1e-19 98.2 72 58.3
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 6.7e-19 97.8 72 56.9
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 6.7e-19 97.8 72 56.9
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 6.7e-19 97.8 72 58.3
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 1.1e-18 97.1 76 52.6
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 1.1e-18 97.1 93 46.2
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 1.1e-18 97.1 72 56.9
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.1e-18 97.1 72 56.9
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 1.5e-18 96.7 83 53.0
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 1.5e-18 96.7 72 56.9
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 2.5e-18 95.9 85 50.6
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 3.3e-18 95.5 85 49.4
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 3.3e-18 95.5 72 54.2
Atru.chr3.488 Acer truncatum HOM05D000268 ORTHO05D004469 4.3e-18 95.1 72 58.3
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 4.3e-18 95.1 70 60.0
Eucgr.H01928 Eucalyptus grandis HOM05D000268 ORTHO05D004469 4.3e-18 95.1 72 58.3
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 4.3e-18 95.1 72 55.6
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 4.3e-18 95.1 88 48.9
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 56.9
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 55.6
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 55.6
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 55.6
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 55.6
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 5.6e-18 94.7 72 55.6
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 7.4e-18 94.4 72 55.6
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 7.4e-18 94.4 69 60.9
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 7.4e-18 94.4 58 79.3
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 7.4e-18 94.4 118 39.8
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 7.4e-18 94.4 72 54.2
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 9.6e-18 94.0 72 56.9
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 9.6e-18 94.0 72 54.2
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 1.3e-17 93.6 72 54.2
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 2.1e-17 92.8 72 54.2
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 2.1e-17 92.8 72 54.2
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.8e-17 92.4 72 54.2
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 2.8e-17 92.4 72 56.9
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.8e-17 92.4 72 54.2
Nitab4.5_0004932g0040 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.8e-17 92.4 72 54.2
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 3.6e-17 92.0 72 55.6
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 3.6e-17 92.0 72 55.6
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 4.8e-17 91.7 72 54.2
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 4.8e-17 91.7 87 47.1
HPP92_007809 Vanilla planifolia HOM05D000268 ORTHO05D004469 4.8e-17 91.7 69 58.0
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 6.2e-17 91.3 70 57.1
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 6.2e-17 91.3 70 57.1
Zm00001eb159370 Zea mays HOM05D000268 ORTHO05D027468 6.2e-17 91.3 72 51.4
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 8.1e-17 90.9 72 51.4
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 1.1e-16 90.5 72 54.2
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 1.1e-16 90.5 72 51.4
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 1.4e-16 90.1 104 42.3
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.4e-16 90.1 70 54.3
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 1.8e-16 89.7 70 55.7
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 3.1e-16 89.0 85 48.2
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 5.3e-16 88.2 104 42.3
SEGI_04650 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 5.3e-16 88.2 69 50.7
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 5.3e-16 88.2 85 42.4
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 6.9e-16 87.8 67 56.7
SHI08704 Sapria himalayana HOM05D000268 ORTHO05D004469 9.0e-16 87.4 96 43.8
Zm00001eb252300 Zea mays HOM05D000268 ORTHO05D004469 9.0e-16 87.4 72 50.0
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 1.2e-15 87.0 83 45.8
Os02g0708600 Oryza sativa ssp. japonica HOM05D000268 ORTHO05D004469 1.2e-15 87.0 72 50.0
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 1.5e-15 86.7 102 39.2
SEGI_11374 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 2.6e-15 85.9 72 48.6
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 3.4e-15 85.5 70 51.4
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 5.8e-15 84.7 85 48.2
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 1.7e-14 83.2 72 51.4
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 2.9e-14 82.4 83 49.4
CDE09G0277 Ceratophyllum demersum HOM05D000268 ORTHO05D004469 3.8e-14 82.0 74 45.9
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 8.4e-14 80.9 69 50.7
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 1.1e-13 80.5 83 48.2
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 1.1e-13 80.5 64 54.7
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 1.1e-13 80.5 64 54.7
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 6.2e-09 64.7 39 61.5
Nn5g29464 Nelumbo nucifera HOM05D000268 ORTHO05D004469 6.9e-08 61.2 58 56.9
Pp3c22_17280 Physcomitrium patens HOM05D000268 ORTHO05D004469 2.2e-06 56.2 84 28.6
SHI08703 Sapria himalayana HOM05D000268 ORTHO05D004469 6.5e-06 54.7 53 49.1


User provided reference genes

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