Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 6.7e-173 610.5 295 100.0
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 6.7e-173 610.5 295 100.0
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 6.7e-173 610.5 295 100.0
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 1.6e-166 589.3 292 96.9
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.0e-165 586.6 292 96.2
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.5e-159 565.5 292 91.4
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 5.9e-153 544.3 298 87.9
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 6.5e-152 540.8 298 88.3
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 4.7e-150 534.6 300 86.3
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 3.9e-149 531.6 300 85.3
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.1e-148 530.0 300 84.7
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 1.5e-145 519.6 315 80.0
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-145 517.7 301 83.4
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 7.4e-140 500.7 325 77.2
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.3e-139 500.0 325 76.3
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 4.1e-138 495.0 325 76.0
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.4e-133 479.9 302 79.8
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 3.7e-131 471.9 293 76.1
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 7.0e-130 467.6 289 75.1
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 1.9e-127 459.5 298 73.8
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 4.7e-126 454.9 297 73.1
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 6.3e-123 444.5 299 73.6
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 1.1e-122 443.7 300 71.3
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 5.9e-121 438.0 290 71.7
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.7e-120 436.4 284 73.2
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 2.3e-120 436.0 285 74.0
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 8.6e-120 434.1 297 70.4
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.1e-119 433.7 281 72.6
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.9e-119 433.0 293 70.6
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 7.2e-119 431.0 290 70.3
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 1.4e-117 426.8 289 69.6
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 1.4e-117 426.8 274 74.1
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 2.3e-117 426.0 290 70.3
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 8.9e-117 424.1 301 68.8
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 9.8e-116 420.6 285 72.6
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 9.8e-116 420.6 285 72.6
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 9.8e-116 420.6 285 72.6
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 2.2e-115 419.5 301 67.1
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 2.8e-115 419.1 285 72.3
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 2.8e-115 419.1 285 71.9
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 1.4e-114 416.8 289 67.8
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 4.5e-113 411.8 285 71.2
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 1.7e-112 409.8 278 69.4
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 2.3e-112 409.5 309 64.1
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 3.8e-112 408.7 306 66.3
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 1.9e-111 406.4 309 63.4
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 1.9e-111 406.4 306 64.4
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 4.3e-111 405.2 310 64.2
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.3e-111 405.2 304 64.8
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 5.6e-111 404.8 309 63.4
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 7.3e-111 404.4 304 63.8
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 7.3e-111 404.4 304 64.1
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 1.2e-110 403.7 247 76.9
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 1.2e-110 403.7 274 69.0
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-110 403.7 304 63.8
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-110 403.7 304 63.8
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-110 403.7 308 64.0
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-110 403.7 308 64.0
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-110 403.7 308 64.0
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 3.6e-110 402.1 301 65.4
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 3.6e-110 402.1 310 63.9
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 2.3e-109 399.4 318 62.3
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 5.2e-109 398.3 291 67.0
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 8.9e-109 397.5 266 69.9
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 4.4e-108 395.2 277 67.1
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 5.8e-108 394.8 305 62.6
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 7.5e-108 394.4 277 67.1
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 9.8e-108 394.0 266 70.3
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 1.3e-107 393.7 306 62.1
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 1.3e-107 393.7 305 63.3
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 1.7e-107 393.3 280 66.4
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 2.9e-107 392.5 287 67.6
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 2.9e-107 392.5 294 63.9
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 3.7e-107 392.1 285 63.5
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 3.7e-107 392.1 290 64.8
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 3.7e-107 392.1 304 61.8
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 6.4e-107 391.3 277 66.8
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 6.4e-107 391.3 302 62.3
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 6.4e-107 391.3 312 62.2
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 1.1e-106 390.6 296 62.8
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 1.4e-106 390.2 301 63.1
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.9e-106 389.8 297 62.6
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 3.2e-106 389.0 272 66.5
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 3.2e-106 389.0 284 63.7
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.6e-105 386.7 236 74.2
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 2.7e-105 386.0 277 65.3
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 4.6e-105 385.2 299 60.9
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 7.8e-105 384.4 239 73.2
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 1.0e-104 384.0 299 64.2
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 1.7e-104 383.3 270 67.0
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 3.0e-104 382.5 305 62.6
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.1e-103 380.6 286 62.6
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 1.1e-103 380.6 234 73.9
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 1.1e-103 380.6 297 61.6
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.5e-103 379.4 304 59.9
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 3.3e-103 379.0 303 60.4
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 7.3e-103 377.9 286 63.3
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.2e-102 377.1 292 61.0
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 1.6e-102 376.7 271 66.8
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 4.7e-102 375.2 278 65.5
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 1.8e-101 373.2 288 61.5
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 3.1e-101 372.5 278 64.4
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 3.1e-101 372.5 303 61.1
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 6.8e-101 371.3 290 59.7
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 6.8e-101 371.3 255 66.3
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 2.0e-100 369.8 237 67.5
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 3.4e-100 369.0 304 60.9
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 9.8e-100 367.5 228 72.8
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 9.8e-100 367.5 263 63.9
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.4e-98 363.6 300 58.0
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 7.0e-98 361.3 287 61.3
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 1.2e-97 360.5 247 66.4
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.2e-97 360.5 272 62.5
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 2.1e-97 359.8 298 55.7
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 4.6e-97 358.6 295 56.9
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 2.3e-96 356.3 274 61.7
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 6.6e-96 354.8 230 69.6
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 2.8e-94 349.4 233 68.2
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 4.7e-94 348.6 228 69.3
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.1e-93 347.4 221 70.6
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 5.8e-92 341.7 234 66.7
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 1.3e-91 340.5 193 80.8
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 2.2e-91 339.7 304 54.6
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.1e-89 333.2 241 63.9
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.1e-87 327.4 225 66.7
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 1.1e-87 327.4 237 63.7
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 1.5e-87 327.0 228 62.3
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.9e-87 326.6 265 57.0
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 4.3e-87 325.5 224 66.1
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.6e-86 323.6 201 70.6
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 2.1e-86 323.2 211 70.6
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 5.2e-85 318.5 199 76.4
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 8.9e-85 317.8 228 62.3
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 2.2e-83 313.2 297 52.9
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 3.8e-83 312.4 228 57.9
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 1.1e-82 310.8 233 59.2
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 2.3e-80 303.1 196 70.4
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.4e-77 293.9 233 57.1
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.0e-77 292.4 294 53.4
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 8.4e-75 284.6 238 59.7
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 1.4e-74 283.9 226 58.8
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 1.7e-72 276.9 276 52.2
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 5.6e-71 271.9 277 50.2
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 2.0e-68 263.5 217 55.8
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 7.6e-68 261.5 274 47.8
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 6.4e-67 258.5 219 53.0
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 8.4e-67 258.1 230 53.0
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 9.3e-66 254.6 228 49.6
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 1.2e-65 254.2 162 72.2
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 3.5e-65 252.7 232 50.9
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.7e-62 242.7 280 48.6
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.1e-61 241.1 271 46.1
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 1.4e-61 240.7 238 48.3
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 9.0e-61 238.0 231 50.2
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.6e-60 236.5 215 53.5
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.9e-59 233.0 230 49.1
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 4.2e-58 229.2 245 46.1
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.6e-57 227.3 174 62.6
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 5.1e-56 222.2 246 46.3
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 2.5e-55 219.9 240 45.8
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 2.8e-54 216.5 232 44.4
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 6.9e-53 211.8 220 47.3
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 9.0e-53 211.5 150 60.7
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 4.9e-51 205.7 197 50.3
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 6.5e-51 205.3 225 47.1
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 5.5e-50 202.2 224 45.1
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 9.3e-50 201.4 130 70.0
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 4.6e-49 199.1 319 39.8
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 1.3e-48 197.6 171 56.1
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 9.7e-47 191.4 152 59.2
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 8.5e-43 178.3 100 78.0
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 8.2e-38 161.8 109 67.0
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 1.8e-37 160.6 87 82.8
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 3.3e-31 139.8 95 67.4
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 5.5e-18 95.9 49 83.7
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 4.4e-15 86.3 102 48.0
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 3.5e-12 76.6 74 47.3
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 4.0e-08 63.2 43 62.8


User provided reference genes

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