Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.9e-87 325.9 169 100.0
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.9e-87 325.9 169 100.0
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 6.5e-64 247.7 129 100.0
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 1.6e-62 243.0 132 96.2
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 3.0e-61 238.8 132 94.7
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 1.4e-58 229.9 129 93.8
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 1.3e-56 223.4 116 98.3
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.8e-56 221.9 129 90.7
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 5.0e-56 221.5 115 98.3
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 6.5e-56 221.1 129 90.7
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 6.5e-56 221.1 129 90.7
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 4.2e-55 218.4 123 93.5
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 3.0e-53 212.2 124 89.5
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 6.7e-53 211.1 122 91.0
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 2.8e-51 205.7 124 86.3
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 2.9e-48 195.7 128 81.2
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 5.7e-44 181.4 124 75.0
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 3.7e-43 178.7 134 71.6
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 3.7e-43 178.7 133 73.7
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 6.3e-43 177.9 123 74.8
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 1.1e-42 177.2 123 75.6
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.1e-42 177.2 133 72.9
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 1.1e-42 177.2 123 74.8
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 1.8e-42 176.4 129 69.0
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 1.8e-42 176.4 131 70.2
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 3.1e-42 175.6 125 72.0
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 5.4e-42 174.9 123 75.6
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 5.4e-42 174.9 129 68.2
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 7.0e-42 174.5 126 71.4
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 9.1e-42 174.1 134 70.9
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 9.1e-42 174.1 128 69.5
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 1.2e-41 173.7 133 68.4
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 1.2e-41 173.7 128 69.5
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 2.0e-41 172.9 128 68.8
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 2.0e-41 172.9 123 71.5
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 2.7e-41 172.6 128 69.5
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 3.5e-41 172.2 115 81.7
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 3.5e-41 172.2 128 68.0
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 4.5e-41 171.8 129 71.3
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 7.7e-41 171.0 128 68.0
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 7.7e-41 171.0 128 68.0
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.0e-40 170.6 123 69.1
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 1.3e-40 170.2 125 68.0
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.3e-40 170.2 125 68.8
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.3e-40 170.2 125 68.8
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.3e-40 170.2 125 68.8
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.7e-40 169.9 128 66.4
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 2.3e-40 169.5 123 73.2
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 2.9e-40 169.1 128 71.1
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 3.8e-40 168.7 126 69.8
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 5.0e-40 168.3 182 58.8
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 6.6e-40 167.9 126 65.9
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.1e-39 167.2 125 65.6
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.1e-39 167.2 132 65.9
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.1e-39 167.2 105 78.1
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.1e-39 167.2 130 68.5
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 1.1e-39 167.2 128 64.8
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.9e-39 166.4 127 65.4
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 2.5e-39 166.0 125 65.6
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.3e-39 165.6 128 64.8
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 4.2e-39 165.2 125 69.6
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 4.2e-39 165.2 125 68.0
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 5.5e-39 164.9 129 65.9
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 5.5e-39 164.9 138 61.6
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 7.2e-39 164.5 124 67.7
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 7.2e-39 164.5 121 68.6
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 7.2e-39 164.5 126 65.1
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 7.2e-39 164.5 128 64.8
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 7.2e-39 164.5 132 65.2
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 9.5e-39 164.1 133 64.7
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 9.5e-39 164.1 128 64.8
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 9.5e-39 164.1 128 64.8
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 1.2e-38 163.7 133 65.4
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 1.6e-38 163.3 117 72.6
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.6e-38 163.3 123 68.3
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.6e-38 163.3 129 66.7
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 1.6e-38 163.3 140 60.7
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 2.1e-38 162.9 125 64.8
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 4.7e-38 161.8 123 69.1
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 4.7e-38 161.8 123 69.1
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 4.7e-38 161.8 125 65.6
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 4.7e-38 161.8 127 68.5
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 4.7e-38 161.8 132 62.9
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.7e-38 161.8 125 65.6
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 6.1e-38 161.4 117 71.8
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 6.1e-38 161.4 127 69.3
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 6.1e-38 161.4 132 64.4
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 8.0e-38 161.0 127 68.5
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 8.0e-38 161.0 122 67.2
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 8.0e-38 161.0 122 69.7
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 8.0e-38 161.0 122 67.2
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 1.0e-37 160.6 122 67.2
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 1.4e-37 160.2 131 63.4
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 1.4e-37 160.2 105 71.4
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 1.4e-37 160.2 123 68.3
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 1.4e-37 160.2 128 62.5
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 1.8e-37 159.8 124 63.7
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 1.8e-37 159.8 95 78.9
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 4.0e-37 158.7 105 70.5
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 5.2e-37 158.3 117 70.1
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 6.8e-37 157.9 146 58.9
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 8.9e-37 157.5 132 59.8
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 1.2e-36 157.1 127 68.5
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 1.5e-36 156.8 129 63.6
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 1.5e-36 156.8 107 71.0
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 5.7e-36 154.8 132 56.8
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 9.8e-36 154.1 99 70.7
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.3e-35 153.7 92 79.3
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 1.3e-35 153.7 107 69.2
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 1.3e-35 153.7 124 59.7
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.7e-35 153.3 119 61.3
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 1.7e-35 153.3 123 63.4
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 1.7e-35 153.3 95 73.7
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 4.9e-35 151.8 118 66.9
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 4.9e-35 151.8 128 62.5
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 6.3e-35 151.4 100 72.0
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 8.3e-35 151.0 124 59.7
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 3.1e-34 149.1 121 63.6
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 9.2e-34 147.5 134 61.2
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 2.0e-33 146.4 130 60.0
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 3.5e-33 145.6 162 51.2
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 7.8e-33 144.4 87 77.0
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 1.0e-32 144.1 129 58.1
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 1.0e-32 144.1 122 59.8
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 1.1e-31 140.6 76 93.4
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 8.0e-30 134.4 154 51.9
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 8.0e-30 134.4 88 73.9
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.3e-29 132.9 100 59.0
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 3.1e-29 132.5 112 57.1
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 2.0e-28 129.8 104 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.6e-28 129.4 129 49.6
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 9.8e-28 127.5 82 75.6
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.7e-27 126.7 102 53.9
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.7e-27 126.7 81 75.3
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.2e-27 126.3 102 52.9
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 6.4e-27 124.8 99 56.6
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.1e-26 124.0 124 50.8
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.1e-26 124.0 83 74.7
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.9e-26 123.2 125 48.0
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 9.2e-26 120.9 113 53.1
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 1.2e-25 120.6 69 84.1
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 4.6e-25 118.6 99 63.6
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 4.6e-25 118.6 80 68.8
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 4.3e-23 112.1 86 62.8
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.8e-22 109.4 63 77.8
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 8.0e-22 107.8 117 53.0
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 8.0e-22 107.8 104 51.9
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 8.0e-22 107.8 87 62.1
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 3.1e-21 105.9 120 51.7
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 4.0e-21 105.5 97 53.6
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 2.4e-18 96.3 61 72.1
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 3.2e-18 95.9 89 51.7
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 3.0e-16 89.4 70 61.4
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 5.6e-15 85.1 116 37.9
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 3.6e-14 82.4 102 44.1
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 1.6e-09 67.0 117 38.5
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 1.6e-09 67.0 105 31.4
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.3e-07 58.2 38 73.7


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