Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p49630 Brassica napus HOM05D003406 ORTHO05D004026 4.1e-63 244.6 126 100.0
C05p40950 Brassica napus HOM05D003406 ORTHO05D004026 3.2e-47 191.8 99 100.0
BcaC05g28071 Brassica carinata HOM05D003406 ORTHO05D004026 2.1e-38 162.5 121 74.4
C02p06160 Brassica napus HOM05D003406 ORTHO05D004026 6.6e-21 104.4 123 52.8
BcaNung01149 Brassica carinata HOM05D003406 ORTHO05D004026 1.5e-20 103.2 123 52.0
A02p01970 Brassica napus HOM05D003406 ORTHO05D004026 1.5e-20 103.2 123 52.8
BraA02t05170Z Brassica rapa HOM05D003406 ORTHO05D004026 1.5e-20 103.2 123 52.8
BolC2t06560H Brassica oleracea HOM05D003406 ORTHO05D004026 1.9e-20 102.8 123 52.0
BcaNung01887 Brassica carinata HOM05D003406 ORTHO05D004026 2.5e-20 102.4 123 51.2
A03p06010 Brassica napus HOM05D003406 ORTHO05D004026 7.3e-20 100.9 123 51.2
BcaB01g05356 Brassica carinata HOM05D003406 ORTHO05D004026 1.3e-19 100.1 125 52.0
C03p07050 Brassica napus HOM05D003406 ORTHO05D004026 2.1e-19 99.4 123 50.4
Thhalv10012890m.g Eutrema salsugineum HOM05D003406 ORTHO05D004026 3.6e-19 98.6 92 60.9
Sp6g30540 Schrenkiella parvula HOM05D003406 ORTHO05D004026 3.1e-18 95.5 123 49.6
THA.LOC104826724 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 5.3e-18 94.7 92 57.6
AT5G13480 Arabidopsis thaliana HOM05D003406 ORTHO05D004026 6.9e-18 94.4 92 58.7
Carub.0006s1164 Capsella rubella HOM05D003406 ORTHO05D004026 6.9e-18 94.4 92 58.7
Aa31LG11G7380 Aethionema arabicum HOM05D003406 ORTHO05D004026 1.2e-17 93.6 92 57.6
AL6G24100 Arabidopsis lyrata HOM05D003406 ORTHO05D004026 2.0e-17 92.8 92 57.6
BolC3t13203H Brassica oleracea HOM05D003406 ORTHO05D004026 5.8e-17 91.3 133 46.6
MD07G1038200 Malus domestica HOM05D003406 ORTHO05D004026 2.2e-16 89.4 92 54.3
Hund13347 Selenicereus undatus HOM05D003406 ORTHO05D004026 2.2e-16 89.4 92 53.3
Ah.10g030390 Amaranthus hybridus HOM05D003406 ORTHO05D004026 2.9e-16 89.0 92 53.3
Atru.chr12.1360 Acer truncatum HOM05D003406 ORTHO05D004026 3.8e-16 88.6 92 54.3
AUR62037187 Chenopodium quinoa HOM05D003406 ORTHO05D004026 3.8e-16 88.6 92 53.3
MELO3C005161.2 Cucumis melo HOM05D003406 ORTHO05D004026 3.8e-16 88.6 107 50.5
CsaV3_5G024420 Cucumis sativus L. HOM05D003406 ORTHO05D004026 3.8e-16 88.6 92 53.3
QL04p014603 Quercus lobata HOM05D003406 ORTHO05D004026 3.8e-16 88.6 107 51.4
QL04p014965 Quercus lobata HOM05D003406 ORTHO05D004026 3.8e-16 88.6 107 51.4
Sed0018149 Sechium edule HOM05D003406 ORTHO05D004026 3.8e-16 88.6 107 50.5
BraA03t09938Z Brassica rapa HOM05D003406 ORTHO05D004026 4.9e-16 88.2 145 43.4
Cfa010885 Carpinus fangiana HOM05D003406 ORTHO05D004026 4.9e-16 88.2 92 54.3
Ciclev10004445m.g Citrus clementina HOM05D003406 ORTHO05D004026 4.9e-16 88.2 107 51.4
ECA248G2072 Erigeron canadensis HOM05D003406 ORTHO05D004026 4.9e-16 88.2 92 54.3
Potri.001G026800 Populus trichocarpa HOM05D003406 ORTHO05D004026 4.9e-16 88.2 92 55.4
FvH4_7g02880 Fragaria vesca HOM05D003406 ORTHO05D004026 1.1e-15 87.0 92 53.3
FAN06G4607 Fragaria x ananassa HOM05D003406 ORTHO05D004026 1.1e-15 87.0 92 53.3
DCAR_031832 Daucus carota HOM05D003406 ORTHO05D004026 1.4e-15 86.7 92 53.3
Hma1.2p1_1396F.1_g280640 Hydrangea macrophylla HOM05D003406 ORTHO05D004026 1.4e-15 86.7 107 50.5
Lsat_1_v5_gn_1_115021 Lactuca sativa HOM05D003406 ORTHO05D004026 1.4e-15 86.7 92 53.3
PSO561G0002 Papaver somniferum HOM05D003406 ORTHO05D004026 1.4e-15 86.7 92 52.2
GSVIVG01013527001 Vitis vinifera HOM05D003406 ORTHO05D004026 1.4e-15 86.7 94 53.2
CiPaw.13G012800 Carya illinoinensis HOM05D003406 ORTHO05D004026 1.9e-15 86.3 107 49.5
HanXRQChr01g0004511 Helianthus annuus HOM05D003406 ORTHO05D004026 1.9e-15 86.3 92 53.3
MD02G1288700 Malus domestica HOM05D003406 ORTHO05D004026 1.9e-15 86.3 92 53.3
Prupe.2G034300 Prunus persica HOM05D003406 ORTHO05D004026 1.9e-15 86.3 92 53.3
PGR031G1802 Punica granatum HOM05D003406 ORTHO05D004026 1.9e-15 86.3 107 50.5
Sc14g0005750 Simmondsia chinensis HOM05D003406 ORTHO05D004026 1.9e-15 86.3 92 52.2
Actinidia06245 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.4e-15 85.9 107 50.5
Nn7g36639 Nelumbo nucifera HOM05D003406 ORTHO05D004026 2.4e-15 85.9 92 52.2
TAR369G0157 Trochodendron aralioides HOM05D003406 ORTHO05D004026 2.4e-15 85.9 92 52.2
Eucgr.G03238 Eucalyptus grandis HOM05D003406 ORTHO05D004026 3.2e-15 85.5 92 53.3
CiPaw.14G007200 Carya illinoinensis HOM05D003406 ORTHO05D004026 4.2e-15 85.1 92 51.1
FAN03G3378 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.2e-15 85.1 92 52.2
Manes.11G004700 Manihot esculenta HOM05D003406 ORTHO05D004026 4.2e-15 85.1 92 52.2
Aqoxy4G02704 Aquilegia oxysepala HOM05D003406 ORTHO05D004026 5.4e-15 84.7 92 51.1
Dinv32032 Davidia involucrata HOM05D003406 ORTHO05D004026 7.1e-15 84.3 107 49.5
HanXRQChr15g0463071 Helianthus annuus HOM05D003406 ORTHO05D004026 7.1e-15 84.3 92 52.2
PSO063G0746 Papaver somniferum HOM05D003406 ORTHO05D004026 7.1e-15 84.3 92 51.1
Potri.003G197900 Populus trichocarpa HOM05D003406 ORTHO05D004026 7.1e-15 84.3 92 53.3
Potri.T125206 Populus trichocarpa HOM05D003406 ORTHO05D004026 7.1e-15 84.3 92 53.3
THA.LOC104819128 Tarenaya hassleriana HOM05D003406 ORTHO05D004026 7.1e-15 84.3 92 52.2
CANSAT25G0328 Cannabis sativa HOM05D003406 ORTHO05D004026 1.2e-14 83.6 92 52.2
Nitab4.5_0000151g0240 Nicotiana tabacum HOM05D003406 ORTHO05D004026 1.2e-14 83.6 92 53.3
Rhsim07G0066700 Rhododendron simsii HOM05D003406 ORTHO05D004026 1.2e-14 83.6 92 53.3
Duzib114G0281 Durio zibethinus HOM05D003406 ORTHO05D004026 1.6e-14 83.2 107 49.5
Solyc08g067040.4 Solanum lycopersicum HOM05D003406 ORTHO05D004026 1.6e-14 83.2 92 52.2
Sopen08g020990 Solanum pennellii HOM05D003406 ORTHO05D004026 1.6e-14 83.2 92 52.2
SGA_v2.0_scaffold124G33625 Striga asiatica HOM05D003406 ORTHO05D004026 1.6e-14 83.2 92 52.2
Thecc.10G162300 Theobroma cacao HOM05D003406 ORTHO05D004026 1.6e-14 83.2 107 49.5
VMungo1127G0085 Vigna mungo HOM05D003406 ORTHO05D004026 1.6e-14 83.2 92 51.1
Phvul.011G207400 Phaseolus vulgaris HOM05D003406 ORTHO05D004026 2.1e-14 82.8 92 51.1
AUR62026878 Chenopodium quinoa HOM05D003406 ORTHO05D004026 2.7e-14 82.4 92 50.0
Nitab4.5_0001669g0120 Nicotiana tabacum HOM05D003406 ORTHO05D004026 2.7e-14 82.4 92 52.2
RcHm_v2.0_Chr1g0323831 Rosa chinensis HOM05D003406 ORTHO05D004026 2.7e-14 82.4 92 51.1
Os01g0951000 Oryza sativa ssp. japonica HOM05D003406 ORTHO05D004026 3.5e-14 82.0 92 50.0
arahy.Tifrunner.gnm1.ann1.07MYST Arachis hypogaea HOM05D003406 ORTHO05D004026 4.6e-14 81.6 92 50.0
arahy.Tifrunner.gnm1.ann1.P8HZNX Arachis hypogaea HOM05D003406 ORTHO05D004026 4.6e-14 81.6 92 50.0
TWI63G0701 Tripterygium wilfordii HOM05D003406 ORTHO05D004026 4.6e-14 81.6 107 47.7
vmacro13749 Vaccinium macrocarpon HOM05D003406 ORTHO05D004026 4.6e-14 81.6 92 51.1
HPP92_025009 Vanilla planifolia HOM05D003406 ORTHO05D004026 6.0e-14 81.3 115 47.8
Zm00001eb140970 Zea mays HOM05D003406 ORTHO05D004026 6.0e-14 81.3 92 50.0
EL10Ac2g02817 Beta vulgaris HOM05D003406 ORTHO05D004026 7.9e-14 80.9 107 47.7
Ca_23943_v3 Cicer arietinum L. HOM05D003406 ORTHO05D004026 1.0e-13 80.5 92 50.0
Haze_03074 Corylus avellana HOM05D003406 ORTHO05D004026 1.0e-13 80.5 89 51.7
CSS0014544 Camellia sinensis var. sinensis HOM05D003406 ORTHO05D004026 1.3e-13 80.1 92 50.0
Cc00_g06910 Coffea canephora HOM05D003406 ORTHO05D004026 1.3e-13 80.1 107 47.7
Dinv09276 Davidia involucrata HOM05D003406 ORTHO05D004026 1.3e-13 80.1 107 46.7
Duzib106G0689 Durio zibethinus HOM05D003406 ORTHO05D004026 1.3e-13 80.1 92 50.0
Lalb_Chr01g0007801 Lupinus albus HOM05D003406 ORTHO05D004026 1.3e-13 80.1 94 51.1
unitig_26.g9605 Utricularia gibba HOM05D003406 ORTHO05D004026 1.7e-13 79.7 107 46.7
Gohir.A10G183800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 2.3e-13 79.3 107 48.6
Gorai.011G213900 Gossypium raimondii HOM05D003406 ORTHO05D004026 2.3e-13 79.3 107 48.6
SalBow5G0382 Salvia bowleyana HOM05D003406 ORTHO05D004026 2.3e-13 79.3 107 46.7
SalBow5G3900 Salvia bowleyana HOM05D003406 ORTHO05D004026 2.3e-13 79.3 107 46.7
Psat4g192120 Pisum sativum HOM05D003406 ORTHO05D004026 3.9e-13 78.6 92 50.0
Gohir.D10G190800 Gossypium hirsutum HOM05D003406 ORTHO05D004026 6.6e-13 77.8 107 47.7
Medtr8g038550 Medicago truncatula HOM05D003406 ORTHO05D004026 6.6e-13 77.8 92 50.0
ATR0745G072 Amborella trichopoda HOM05D003406 ORTHO05D004026 8.7e-13 77.4 107 43.9
Glyma.15G236500 Glycine max HOM05D003406 ORTHO05D004026 8.7e-13 77.4 92 50.0
Mapoly0029s0111 Marchantia polymorpha HOM05D003406 ORTHO05D004026 1.1e-12 77.0 92 48.9
Migut.B01223 Erythranthe guttata HOM05D003406 ORTHO05D004026 1.9e-12 76.3 92 48.9
MSTRG.16987 Avicennia marina HOM05D003406 ORTHO05D004026 2.5e-12 75.9 92 47.8
Lalb_Chr19g0132381 Lupinus albus HOM05D003406 ORTHO05D004026 3.3e-12 75.5 94 50.0
Peaxi162Scf00341g00714 Petunia axillaris HOM05D003406 ORTHO05D004026 3.3e-12 75.5 92 48.9
Pp3c16_16500 Physcomitrium patens HOM05D003406 ORTHO05D004026 4.3e-12 75.1 92 47.8
Glyma.13G198200 Glycine max HOM05D003406 ORTHO05D004026 7.4e-12 74.3 92 48.9
ClCG01G007460 Citrullus lanatus HOM05D003406 ORTHO05D004026 2.8e-11 72.4 139 38.8
SHI03989 Sapria himalayana HOM05D003406 ORTHO05D004026 6.2e-11 71.2 89 43.8
Sabra01G0019600 Salix brachista HOM05D003406 ORTHO05D004026 9.0e-10 67.4 126 39.7
RcHm_v2.0_Chr5g0010661 Rosa chinensis HOM05D003406 ORTHO05D004026 1.2e-09 67.0 90 43.3
SEGI_13935 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 1.2e-09 67.0 92 44.6
Actinidia10165 Actinidia chinensis HOM05D003406 ORTHO05D004026 2.6e-09 65.9 96 44.8
Manes.04G160100 Manihot esculenta HOM05D003406 ORTHO05D004026 1.1e-07 60.5 74 47.3
Sabra03G0147300 Salix brachista HOM05D003406 ORTHO05D004026 3.2e-07 58.9 127 37.0
AagrBONN_evm.TU.Sc2ySwM_369.461 Anthoceros agrestis HOM05D003406 ORTHO05D004026 4.2e-07 58.5 93 37.6
FAN19G0629 Fragaria x ananassa HOM05D003406 ORTHO05D004026 7.1e-07 57.8 91 40.7
SMO353G0072 Selaginella moellendorffii HOM05D003406 ORTHO05D004026 1.2e-06 57.0 92 37.0
TPR.G20465 Trifolium pratense HOM05D003406 ORTHO05D004026 2.1e-06 56.2 38 71.1
C03p43350 Brassica napus HOM05D003406 ORTHO05D004026 3.5e-06 55.5 67 52.2
BolC3t16605H Brassica oleracea HOM05D003406 ORTHO05D004026 3.5e-06 55.5 67 52.2
FAN26G1924 Fragaria x ananassa HOM05D003406 ORTHO05D004026 4.6e-06 55.1 87 41.4
SEGI_28398 Sequoiadendron giganteum HOM05D003406 ORTHO05D004026 6.0e-06 54.7 79 41.8


User provided reference genes

Program Settings