Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 5.0e-92 342.0 336 100.0
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 5.0e-92 342.0 336 100.0
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.8e-89 333.6 336 98.5
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 6.8e-89 331.6 336 98.2
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 7.6e-56 221.9 332 80.7
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 2.2e-55 220.3 326 74.2
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 3.8e-55 219.5 332 75.0
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 5.4e-54 215.7 328 74.1
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.8e-52 210.7 328 75.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 1.1e-46 191.4 332 72.3
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 4.2e-46 189.5 327 70.6
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 8.7e-44 181.8 322 48.1
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 8.5e-31 138.7 329 67.5
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.5e-30 137.1 325 64.9
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.2e-29 134.8 317 69.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 6.1e-29 132.5 328 67.1
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 7.9e-29 132.1 329 66.9
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.0e-28 131.7 334 68.3
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.4e-28 131.3 325 68.0
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 2.3e-28 130.6 329 68.4
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 3.0e-28 130.2 321 65.1
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 3.9e-28 129.8 329 68.4
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 3.9e-28 129.8 328 66.2
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 5.1e-28 129.4 327 67.3
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 5.1e-28 129.4 332 57.8
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 8.8e-28 128.6 325 58.5
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.1e-27 128.3 329 67.2
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 1.1e-27 128.3 332 68.1
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 3.3e-27 126.7 324 67.0
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.3e-27 126.7 334 66.5
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 3.3e-27 126.7 326 70.6
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 4.3e-27 126.3 326 66.9
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 4.3e-27 126.3 329 63.2
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 5.7e-27 125.9 326 58.6
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 7.4e-27 125.6 327 67.3
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.3e-26 124.8 319 66.8
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 1.3e-26 124.8 329 66.3
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 1.3e-26 124.8 334 67.4
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 1.7e-26 124.4 334 64.4
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.7e-26 124.4 329 69.0
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.2e-26 124.0 329 62.6
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 2.8e-26 123.6 329 67.8
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 3.7e-26 123.2 333 68.8
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 3.7e-26 123.2 329 68.7
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 4.8e-26 122.9 317 68.1
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 4.8e-26 122.9 329 68.7
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 4.8e-26 122.9 341 66.9
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 6.3e-26 122.5 328 66.2
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 6.3e-26 122.5 329 67.2
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 6.3e-26 122.5 329 66.9
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 8.2e-26 122.1 333 67.9
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 8.2e-26 122.1 333 67.9
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 8.2e-26 122.1 318 68.2
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.4e-25 121.3 329 66.6
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 1.8e-25 120.9 325 67.7
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 1.8e-25 120.9 324 68.8
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.8e-25 120.9 329 64.7
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 2.4e-25 120.6 325 66.2
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 3.1e-25 120.2 329 67.8
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 4.1e-25 119.8 331 66.5
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 4.1e-25 119.8 331 66.5
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 5.3e-25 119.4 327 68.8
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 5.3e-25 119.4 325 68.3
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 6.9e-25 119.0 330 67.0
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.5e-24 117.9 327 69.4
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.0e-24 117.5 326 66.3
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.6e-24 117.1 326 68.1
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 3.4e-24 116.7 335 67.8
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 3.4e-24 116.7 327 67.6
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 7.7e-24 115.5 335 67.8
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 7.7e-24 115.5 314 67.8
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.0e-23 115.2 328 64.9
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.3e-23 114.8 322 60.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 2.2e-23 114.0 326 68.1
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.2e-23 114.0 326 64.1
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 2.9e-23 113.6 340 63.5
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.1e-22 111.7 314 69.7
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.1e-22 111.7 333 61.9
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 1.9e-22 110.9 328 61.0
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 2.5e-22 110.5 330 68.5
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 4.2e-22 109.8 330 68.5
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 3.6e-21 106.7 304 67.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 3.6e-21 106.7 374 54.8
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 4.7e-21 106.3 326 66.3
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 4.7e-21 106.3 327 67.6
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 7.9e-21 105.5 331 66.2
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 7.9e-21 105.5 328 65.9
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.4e-20 104.8 332 58.4
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.3e-20 104.0 321 65.1
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 5.1e-20 102.8 328 65.2
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 5.1e-20 102.8 91 52.7
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 6.7e-20 102.4 331 65.6
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 8.8e-20 102.1 328 63.4
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 7.4e-19 99.0 331 65.3
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.2e-18 97.4 92 51.1
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 2.2e-18 97.4 332 60.8
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 2.4e-17 94.0 330 61.2
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 1.2e-16 91.7 322 45.3
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.5e-16 91.3 89 51.7
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.7e-16 89.0 78 53.8
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.1e-14 85.1 90 47.8
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 1.1e-14 85.1 60 60.0
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.5e-14 84.7 63 57.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.5e-14 84.7 63 57.1
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 3.2e-14 83.6 73 47.9
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.2e-14 83.2 57 63.2
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 9.4e-14 82.0 57 63.2
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.4e-12 78.2 90 46.7
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.0e-12 77.0 64 50.0
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 2.0e-11 74.3 57 52.6
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 9.7e-11 72.0 91 41.8
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 1.6e-08 64.7 57 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 3.5e-08 63.5 75 44.0
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 5.9e-08 62.8 57 45.6
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 5.9e-08 62.8 59 45.8
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 5.9e-08 62.8 59 45.8
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 7.7e-08 62.4 59 44.1
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 7.7e-08 62.4 65 46.2
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 1.3e-07 61.6 59 45.8
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.3e-07 61.6 58 44.8
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 2.2e-07 60.8 59 44.1
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 2.2e-07 60.8 57 42.1
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 2.9e-07 60.5 59 42.4
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 3.8e-07 60.1 58 43.1
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 3.8e-07 60.1 58 43.1
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 3.8e-07 60.1 58 43.1
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 3.8e-07 60.1 59 42.4
DCAR_030820 Daucus carota HOM05D005956 ORTHO05D007197 5.0e-07 59.7 59 40.7
Glyma.15G000800 Glycine max HOM05D005956 ORTHO05D007197 5.0e-07 59.7 59 44.1
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 6.5e-07 59.3 59 42.4
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 8.5e-07 58.9 59 44.1
Ca_00996_v3 Cicer arietinum L. HOM05D005956 ORTHO05D007197 8.5e-07 58.9 59 42.4
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 8.5e-07 58.9 59 42.4
Psat5g306040 Pisum sativum HOM05D005956 ORTHO05D007197 8.5e-07 58.9 58 43.1
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 1.1e-06 58.5 59 44.1
Hma1.2p1_0244F.1_g101100 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 1.5e-06 58.2 53 45.3
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 1.5e-06 58.2 59 40.7
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 1.5e-06 58.2 57 42.1
Hma1.2p1_2405F.1_g321440 Hydrangea macrophylla HOM05D002901 ORTHO05D003183 1.9e-06 57.8 53 43.4
DCAR_018383 Daucus carota HOM05D002901 ORTHO05D003183 2.5e-06 57.4 53 45.3
Sed0023146 Sechium edule HOM05D005956 ORTHO05D007197 2.5e-06 57.4 59 40.7
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 2.5e-06 57.4 58 41.4
vmacro19244 Vaccinium macrocarpon HOM05D002901 ORTHO05D003183 2.5e-06 57.4 53 43.4
HPP92_000192 Vanilla planifolia HOM05D005956 ORTHO05D007197 2.5e-06 57.4 59 40.7
HPP92_000245 Vanilla planifolia HOM05D005956 ORTHO05D007197 2.5e-06 57.4 59 40.7
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 3.2e-06 57.0 53 43.4
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 4.2e-06 56.6 58 37.9
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 4.2e-06 56.6 59 40.7
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 4.2e-06 56.6 57 42.1
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 4.2e-06 56.6 55 41.8
Lj1C43T9 Lonicera japonica HOM05D002901 ORTHO05D003183 4.2e-06 56.6 53 41.5
LjContig00155g0015255 Lotus japonicus HOM05D002901 ORTHO05D003183 4.2e-06 56.6 53 41.5
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 4.2e-06 56.6 59 40.7
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 4.2e-06 56.6 56 42.9
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 5.5e-06 56.2 56 41.1
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 5.5e-06 56.2 57 42.1
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 5.5e-06 56.2 59 39.0
COL.COLO4_25126 Corchorus olitorius HOM05D005956 ORTHO05D007197 7.2e-06 55.8 57 38.6
Dinv41812 Davidia involucrata HOM05D002901 ORTHO05D003183 7.2e-06 55.8 53 41.5
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 7.2e-06 55.8 59 37.3
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 7.2e-06 55.8 53 39.6
SGA_v2.0_scaffold7G03687 Striga asiatica HOM05D002901 ORTHO05D003183 7.2e-06 55.8 58 37.9
CBR_g26328 Chara braunii HOM05D002901 ORTHO05D003183 9.4e-06 55.5 91 29.7
Nitab4.5_0005679g0020 Nicotiana tabacum HOM05D005956 ORTHO05D007197 9.4e-06 55.5 60 36.7


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