Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p42340 Brassica napus HOM05D005914 ORTHO05D007361 1.3e-229 799.3 388 100.0
A06p36180 Brassica napus HOM05D005914 ORTHO05D007361 1.8e-210 735.7 388 93.3
BraA06t26540Z Brassica rapa HOM05D005914 ORTHO05D007361 1.3e-208 729.6 388 92.5
Thhalv10004397m.g Eutrema salsugineum HOM05D005914 ORTHO05D007361 2.7e-206 721.8 382 91.1
Sp2g22050 Schrenkiella parvula HOM05D005914 ORTHO05D007361 1.5e-201 706.1 382 89.5
BolC7t44763H Brassica oleracea HOM05D005914 ORTHO05D007361 2.7e-198 695.3 342 98.0
Carub.0006s2334 Capsella rubella HOM05D005914 ORTHO05D007361 1.7e-192 676.0 376 87.0
AT5G25480 Arabidopsis thaliana HOM05D005914 ORTHO05D007361 2.2e-192 675.6 375 86.9
AL6G37280 Arabidopsis lyrata HOM05D005914 ORTHO05D007361 1.2e-190 669.8 375 86.9
Aa31LG11G4850 Aethionema arabicum HOM05D005914 ORTHO05D007361 1.3e-184 649.8 384 82.3
THA.LOC104799221 Tarenaya hassleriana HOM05D005914 ORTHO05D007361 1.1e-167 593.6 382 77.7
Haze_21570 Corylus avellana HOM05D005914 ORTHO05D007361 2.0e-161 572.8 395 72.7
Cfa013180 Carpinus fangiana HOM05D005914 ORTHO05D007361 1.0e-160 570.5 387 73.6
QL02p022744 Quercus lobata HOM05D005914 ORTHO05D007361 1.6e-158 563.1 388 72.9
TWI63G0300 Tripterygium wilfordii HOM05D005914 ORTHO05D007361 1.8e-157 559.7 391 71.4
Thecc.09G149100 Theobroma cacao HOM05D005914 ORTHO05D007361 4.8e-155 551.6 389 72.5
Atru.chr7.2376 Acer truncatum HOM05D005914 ORTHO05D007361 2.4e-154 549.3 380 72.1
CiPaw.07G220900 Carya illinoinensis HOM05D005914 ORTHO05D007361 5.3e-154 548.1 384 72.7
RcHm_v2.0_Chr6g0298621 Rosa chinensis HOM05D005914 ORTHO05D007361 1.2e-153 547.0 384 71.1
TAR625G1283 Trochodendron aralioides HOM05D005914 ORTHO05D007361 3.5e-153 545.4 383 70.8
MD15G1120500 Malus domestica HOM05D005914 ORTHO05D007361 5.0e-152 541.6 384 70.1
Gorai.004G274400 Gossypium raimondii HOM05D005914 ORTHO05D007361 1.2e-150 537.0 390 69.5
Potri.006G250800 Populus trichocarpa HOM05D005914 ORTHO05D007361 3.6e-150 535.4 377 70.6
CANSAT80G0109 Cannabis sativa HOM05D005914 ORTHO05D007361 4.7e-150 535.0 377 71.4
Sabra06G0196100 Salix brachista HOM05D005914 ORTHO05D007361 8.0e-150 534.3 379 70.2
Gohir.A08G236800 Gossypium hirsutum HOM05D005914 ORTHO05D007361 1.4e-149 533.5 380 70.5
CANSAT80G2406 Cannabis sativa HOM05D005914 ORTHO05D007361 6.8e-149 531.2 377 71.1
CSS0046358 Camellia sinensis var. sinensis HOM05D005914 ORTHO05D007361 1.2e-148 530.4 385 68.8
Ciclev10008576m.g Citrus clementina HOM05D005914 ORTHO05D007361 2.0e-148 529.6 375 71.5
FAN24G3193 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.4e-148 528.9 385 69.4
FvH4_2g29650 Fragaria vesca HOM05D005914 ORTHO05D007361 4.4e-148 528.5 385 69.4
Actinidia22373 Actinidia chinensis HOM05D005914 ORTHO05D007361 1.4e-146 523.5 379 68.9
Eucgr.C01789 Eucalyptus grandis HOM05D005914 ORTHO05D007361 1.8e-146 523.1 379 68.6
GSVIVG01035808001 Vitis vinifera HOM05D005914 ORTHO05D007361 9.1e-146 520.8 376 70.7
Rhsim02G0194500 Rhododendron simsii HOM05D005914 ORTHO05D007361 4.5e-145 518.5 379 69.9
MELO3C011235.2 Cucumis melo HOM05D005914 ORTHO05D007361 5.9e-145 518.1 382 66.8
PSO170G3156 Papaver somniferum HOM05D005914 ORTHO05D007361 2.9e-144 515.8 384 66.9
SGA_v2.0_scaffold4G02186 Striga asiatica HOM05D005914 ORTHO05D007361 2.5e-143 512.7 379 67.0
Migut.E01476 Erythranthe guttata HOM05D005914 ORTHO05D007361 7.2e-143 511.1 379 66.5
arahy.Tifrunner.gnm1.ann1.J9LH1L Arachis hypogaea HOM05D005914 ORTHO05D007361 2.1e-142 509.6 383 67.1
Cc11_g01820 Coffea canephora HOM05D005914 ORTHO05D007361 2.1e-142 509.6 382 66.0
PGR142G2371 Punica granatum HOM05D005914 ORTHO05D007361 1.0e-141 507.3 385 67.8
Aqoxy7G02060 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 2.3e-141 506.1 384 65.1
Glyma.15G054900 Glycine max HOM05D005914 ORTHO05D007361 2.3e-141 506.1 376 67.8
Lj6g0019162 Lotus japonicus HOM05D005914 ORTHO05D007361 3.0e-141 505.8 376 67.6
Lalb_Chr20g0122961 Lupinus albus HOM05D005914 ORTHO05D007361 3.0e-141 505.8 371 68.5
arahy.Tifrunner.gnm1.ann1.T9E77A Arachis hypogaea HOM05D005914 ORTHO05D007361 1.2e-140 503.8 383 67.1
ClCG08G013130 Citrullus lanatus HOM05D005914 ORTHO05D007361 7.5e-140 501.1 386 65.8
HanXRQChr13g0402741 Helianthus annuus HOM05D005914 ORTHO05D007361 9.8e-140 500.7 377 66.6
Psat1g215880 Pisum sativum HOM05D005914 ORTHO05D007361 2.2e-139 499.6 371 67.7
Solyc08g067070.3 Solanum lycopersicum HOM05D005914 ORTHO05D007361 2.2e-139 499.6 383 66.1
EL10Ac2g02591 Beta vulgaris HOM05D005914 ORTHO05D007361 3.7e-139 498.8 381 65.9
CAN.G98.27 Capsicum annuum HOM05D005914 ORTHO05D007361 6.3e-139 498.0 374 66.3
Nn2g11936 Nelumbo nucifera HOM05D005914 ORTHO05D007361 1.8e-138 496.5 357 68.6
Sopen08g021020 Solanum pennellii HOM05D005914 ORTHO05D007361 2.4e-138 496.1 383 65.8
Medtr2g009140 Medicago truncatula HOM05D005914 ORTHO05D007361 5.4e-138 495.0 375 66.7
Ca_00145_v3 Cicer arietinum L. HOM05D005914 ORTHO05D007361 9.2e-138 494.2 375 66.4
Duzib150G0329 Durio zibethinus HOM05D005914 ORTHO05D007361 2.7e-137 492.7 385 65.7
VMungo0540G0716 Vigna mungo HOM05D005914 ORTHO05D007361 5.9e-137 491.5 381 66.1
DCAR_006234 Daucus carota HOM05D005914 ORTHO05D007361 1.9e-135 486.5 410 61.0
Nitab4.5_0001669g0040 Nicotiana tabacum HOM05D005914 ORTHO05D007361 2.5e-135 486.1 375 66.1
HPP92_012620 Vanilla planifolia HOM05D005914 ORTHO05D007361 3.3e-135 485.7 380 62.9
COL.COLO4_23983 Corchorus olitorius HOM05D005914 ORTHO05D007361 1.6e-134 483.4 382 66.2
Nitab4.5_0000151g0200 Nicotiana tabacum HOM05D005914 ORTHO05D007361 3.6e-134 482.3 379 65.2
Lsat_1_v5_gn_6_22181 Lactuca sativa HOM05D005914 ORTHO05D007361 1.4e-133 480.3 365 64.7
CDE04G0852 Ceratophyllum demersum HOM05D005914 ORTHO05D007361 1.7e-131 473.4 389 62.2
Gohir.D08G257400 Gossypium hirsutum HOM05D005914 ORTHO05D007361 2.9e-131 472.6 390 63.8
unitig_747.g21653 Utricularia gibba HOM05D005914 ORTHO05D007361 4.1e-130 468.8 371 62.5
Sed0010731 Sechium edule HOM05D005914 ORTHO05D007361 2.7e-129 466.1 359 64.9
Zm00001eb358040 Zea mays HOM05D005914 ORTHO05D007361 1.3e-128 463.8 383 62.9
ECA233G4604 Erigeron canadensis HOM05D005914 ORTHO05D007361 2.3e-128 463.0 362 65.5
arahy.Tifrunner.gnm1.ann1.71PCZ9 Arachis hypogaea HOM05D005914 ORTHO05D007361 7.3e-127 458.0 354 66.4
SalBow2G3472 Salvia bowleyana HOM05D005914 ORTHO05D007361 1.1e-122 444.1 374 61.8
Peaxi162Scf00341g00624 Petunia axillaris HOM05D005914 ORTHO05D007361 1.9e-119 433.3 335 64.2
AUR62024878 Chenopodium quinoa HOM05D005914 ORTHO05D007361 5.6e-119 431.8 358 63.7
Prupe.1G473200 Prunus persica HOM05D005914 ORTHO05D007361 6.2e-118 428.3 313 70.0
Manes.16G119400 Manihot esculenta HOM05D005914 ORTHO05D007361 1.1e-114 417.5 314 68.2
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 1.5e-108 397.1 307 64.8
Mapoly0011s0185 Marchantia polymorpha HOM05D005914 ORTHO05D007361 5.8e-108 395.2 457 48.8
Dinv11618 Davidia involucrata HOM05D005914 ORTHO05D007361 1.2e-105 387.5 299 65.2
CsaV3_2G031850 Cucumis sativus L. HOM05D005914 ORTHO05D007361 2.8e-102 376.3 393 52.7
Pp3c12_2410 Physcomitrium patens HOM05D005914 ORTHO05D007361 8.1e-102 374.8 470 47.0
SMO146G0196 Selaginella moellendorffii HOM05D005914 ORTHO05D007361 4.0e-101 372.5 378 52.9
ATR0815G040 Amborella trichopoda HOM05D005914 ORTHO05D007361 8.4e-99 364.8 348 55.7
AUR62030669 Chenopodium quinoa HOM05D005914 ORTHO05D007361 3.9e-96 355.9 328 57.0
Phvul.006G205000 Phaseolus vulgaris HOM05D005914 ORTHO05D007361 5.1e-96 355.5 296 62.2
PSO455G0041 Papaver somniferum HOM05D005914 ORTHO05D007361 4.8e-94 349.0 284 62.7
FAN27G2538 Fragaria x ananassa HOM05D005914 ORTHO05D007361 3.3e-87 326.2 373 52.5
CBR_g3173 Chara braunii HOM05D005914 ORTHO05D007361 7.6e-84 315.1 540 38.9
CARHR187910 Cardamine hirsuta HOM05D005914 ORTHO05D007361 2.2e-83 313.5 168 88.1
Os01g0612000 Oryza sativa ssp. japonica HOM05D005914 ORTHO05D007361 7.1e-82 308.5 277 57.8
FAN20G2480 Fragaria x ananassa HOM05D005914 ORTHO05D007361 4.9e-75 285.8 404 44.8
Cpa.g.sc91.41 Carica papaya HOM05D005914 ORTHO05D007361 9.3e-74 281.6 190 73.7
MD08G1143700 Malus domestica HOM05D005914 ORTHO05D007361 5.1e-72 275.8 281 54.4
MSTRG.13986 Avicennia marina HOM05D005914 ORTHO05D007361 1.1e-71 274.6 252 57.1
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 3.7e-70 269.6 269 54.6
MCO14G456 Micromonas commoda HOM05D005914 ORTHO05D007361 2.6e-68 263.5 388 41.0
Lj7C718G14 Lonicera japonica HOM05D005914 ORTHO05D007361 5.9e-68 262.3 266 53.8
AagrBONN_evm.TU.Sc2ySwM_228.810 Anthoceros agrestis HOM05D005914 ORTHO05D007361 7.7e-68 261.9 291 49.1
PRCOL_00003212 Prasinoderma coloniale HOM05D005914 ORTHO05D007361 7.7e-68 261.9 416 38.9
Ah.12g063960 Amaranthus hybridus HOM05D005914 ORTHO05D007361 1.0e-64 251.5 155 78.1
MBI04_g46184_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 7.4e-63 245.4 350 45.1
RcHm_v2.0_Chr1g0355831 Rosa chinensis HOM05D005914 ORTHO05D007361 2.4e-61 240.4 251 53.8
Hma1.2p1_0000F.1_g000780 Hydrangea macrophylla HOM05D005914 ORTHO05D007361 3.9e-56 223.0 220 57.3
MD15G1439700 Malus domestica HOM05D005914 ORTHO05D007361 1.4e-48 198.0 404 37.9
Glyma.08G177800 Glycine max HOM05D005914 ORTHO05D007361 2.2e-46 190.7 197 51.8
MCO11G560 Micromonas commoda HOM05D005914 ORTHO05D007361 1.5e-42 177.9 395 31.6
Nitab4.5_0003498g0080 Nicotiana tabacum HOM05D005914 ORTHO05D007361 1.8e-40 171.0 124 68.5
SEGI_35502 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 1.8e-40 171.0 111 73.9
CAN.G374.12 Capsicum annuum HOM05D005914 ORTHO05D007361 9.8e-31 138.7 305 33.8
Cre12.g484600 Chlamydomonas reinhardtii HOM05D005914 ORTHO05D007361 9.8e-31 138.7 175 42.9
PGR031G2948 Punica granatum HOM05D005914 ORTHO05D007361 3.7e-30 136.7 82 78.0
Sc09g0008460 Simmondsia chinensis HOM05D005914 ORTHO05D007361 4.1e-29 133.3 141 50.4
Sc09g0008440 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.1e-26 125.2 83 71.1
Sc09g0008450 Simmondsia chinensis HOM05D005914 ORTHO05D007361 1.5e-26 124.8 80 75.0
Oeu033137.1 Olea europaea HOM05D005914 ORTHO05D007361 2.5e-26 124.0 84 71.4
Sc09g0008580 Simmondsia chinensis HOM05D005914 ORTHO05D007361 9.5e-26 122.1 80 73.8
TPR.G22731 Trifolium pratense HOM05D005914 ORTHO05D007361 9.2e-21 105.5 68 77.9
SEGI_14251 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 4.7e-17 93.2 63 71.4
Aqoxy7G02061 Aquilegia oxysepala HOM05D005914 ORTHO05D007361 1.4e-16 91.7 57 68.4
MBI04_g10409_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 9.8e-15 85.5 56 66.1
MBI04_g46185_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 9.8e-15 85.5 56 66.1
Sc09g0008540 Simmondsia chinensis HOM05D002899 ORTHO05D003850 2.9e-14 84.0 49 79.6
SEGI_16557 Sequoiadendron giganteum HOM05D005914 ORTHO05D007361 5.4e-13 79.7 50 72.0
Ah.12g063950 Amaranthus hybridus HOM05D005914 ORTHO05D007361 3.9e-11 73.6 120 40.0
MD08G1144900 Malus domestica HOM05D005914 ORTHO05D007361 6.6e-11 72.8 85 44.7
Sc09g0008600 Simmondsia chinensis HOM05D005914 ORTHO05D007361 3.1e-08 63.9 46 63.0
Ah.12g063940 Amaranthus hybridus HOM05D005914 ORTHO05D007361 5.2e-08 63.2 40 70.0
Glyma.08G177700 Glycine max HOM05D005914 ORTHO05D007361 2.6e-07 60.8 28 92.9
Lj7A718T66 Lonicera japonica HOM05D005914 ORTHO05D007361 3.7e-06 57.0 73 43.8


User provided reference genes

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