Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p07780 Brassica napus HOM05D003620 ORTHO05D004261 2.9e-41 171.4 83 100.0
BolC7t41196H Brassica oleracea HOM05D003620 ORTHO05D004261 2.9e-41 171.4 83 100.0
C09p20220 Brassica napus HOM05D003620 ORTHO05D004261 2.0e-34 148.7 72 100.0
BolC9t54929H Brassica oleracea HOM05D003620 ORTHO05D004261 2.0e-34 148.7 72 100.0
BcaC04g22352 Brassica carinata HOM05D003620 ORTHO05D004261 7.7e-34 146.7 72 98.6
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 7.5e-21 103.6 57 87.7
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 7.5e-21 103.6 57 87.7
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 7.5e-21 103.6 57 87.7
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 7.5e-21 103.6 57 87.7
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 7.5e-21 103.6 57 87.7
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 1.7e-20 102.4 57 86.0
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 2.8e-20 101.7 57 84.2
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.7e-20 101.3 57 84.2
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.7e-20 101.3 57 84.2
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 4.8e-20 100.9 57 84.2
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 6.3e-20 100.5 57 84.2
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 8.2e-20 100.1 57 84.2
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.4e-19 99.4 57 82.5
Aa31LG3G13090 Aethionema arabicum HOM05D003620 ORTHO05D004261 1.8e-19 99.0 57 82.5
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 1.8e-19 99.0 57 82.5
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 2.4e-19 98.6 57 82.5
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 3.1e-19 98.2 57 80.7
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 7.0e-19 97.1 57 80.7
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 9.1e-19 96.7 57 80.7
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 9.1e-19 96.7 57 80.7
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 9.1e-19 96.7 57 80.7
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 1.2e-18 96.3 57 78.9
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 1.6e-18 95.9 57 77.2
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 2.0e-18 95.5 57 78.9
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 2.0e-18 95.5 57 78.9
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 2.0e-18 95.5 57 78.9
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 2.0e-18 95.5 57 78.9
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.0e-18 95.5 57 78.9
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 4.5e-18 94.4 57 77.2
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 5.9e-18 94.0 57 75.4
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 1.0e-17 93.2 57 75.4
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 1.0e-17 93.2 69 62.3
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 1.3e-17 92.8 57 75.4
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.3e-17 92.8 57 71.9
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 1.7e-17 92.4 57 73.7
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 2.2e-17 92.0 57 71.9
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 2.9e-17 91.7 57 73.7
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 2.9e-17 91.7 57 73.7
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 5.0e-17 90.9 57 71.9
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 5.0e-17 90.9 55 70.9
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 5.0e-17 90.9 57 71.9
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 5.0e-17 90.9 57 70.2
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 6.5e-17 90.5 57 71.9
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 8.5e-17 90.1 57 70.2
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 8.5e-17 90.1 57 70.2
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 71.9
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 70.2
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 68.4
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 70.2
Oeu047368.1 Olea europaea HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 70.2
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 1.1e-16 89.7 57 70.2
Cpa.g.sc845.5 Carica papaya HOM05D003620 ORTHO05D004261 1.5e-16 89.4 57 71.9
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.9e-16 89.0 57 71.9
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.9e-16 89.0 57 71.9
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 1.9e-16 89.0 57 70.2
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 2.5e-16 88.6 55 70.9
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 2.5e-16 88.6 57 70.2
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 2.5e-16 88.6 55 72.7
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 2.5e-16 88.6 57 68.4
C07p07760 Brassica napus HOM05D003620 ORTHO05D004261 3.2e-16 88.2 47 89.4
Haze_10770 Corylus avellana HOM05D003620 ORTHO05D004261 3.2e-16 88.2 54 72.2
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 3.2e-16 88.2 57 68.4
GSVIVG01029732001 Vitis vinifera HOM05D003620 ORTHO05D004261 3.2e-16 88.2 57 70.2
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 4.2e-16 87.8 55 72.7
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 70.2
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 70.2
Lj5C243T9 Lonicera japonica HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 66.7
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 68.4
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 71.9
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 4.2e-16 87.8 69 62.3
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 70.2
SalBow5G2754 Salvia bowleyana HOM05D003620 ORTHO05D004261 4.2e-16 87.8 57 70.2
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 68.4
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 68.4
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 70.2
SEGI_27738 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 5.5e-16 87.4 55 69.1
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 5.5e-16 87.4 57 68.4
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 7.2e-16 87.0 57 70.2
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 7.2e-16 87.0 57 70.2
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 7.2e-16 87.0 57 70.2
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 7.2e-16 87.0 57 68.4
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 9.4e-16 86.7 57 66.7
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 9.4e-16 86.7 57 68.4
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 9.4e-16 86.7 57 70.2
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 9.4e-16 86.7 57 70.2
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 9.4e-16 86.7 57 70.2
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 1.2e-15 86.3 57 64.9
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 1.2e-15 86.3 57 68.4
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 1.2e-15 86.3 57 68.4
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.6e-15 85.9 57 68.4
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 1.6e-15 85.9 57 68.4
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 2.1e-15 85.5 57 64.9
Cc02_g21940 Coffea canephora HOM05D003620 ORTHO05D004261 2.1e-15 85.5 57 68.4
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 2.1e-15 85.5 57 68.4
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 2.1e-15 85.5 57 66.7
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 2.1e-15 85.5 57 66.7
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 2.7e-15 85.1 57 66.7
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 2.7e-15 85.1 57 68.4
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 3.6e-15 84.7 57 68.4
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 3.6e-15 84.7 57 64.9
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 6.1e-15 84.0 54 70.4
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 6.1e-15 84.0 69 56.5
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 6.1e-15 84.0 57 66.7
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 1.0e-14 83.2 57 63.2
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 1.0e-14 83.2 57 63.2
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 1.0e-14 83.2 57 68.4
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 5.2e-14 80.9 57 64.9
arahy.Tifrunner.gnm1.ann1.F2S38R Arachis hypogaea HOM05D003620 ORTHO05D004261 1.2e-13 79.7 54 66.7
CsaV3_6G003040 Cucumis sativus L. HOM05D003620 ORTHO05D004261 1.2e-13 79.7 57 68.4
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 2.0e-13 79.0 57 59.6
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 2.0e-13 79.0 57 63.2
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 2.6e-13 78.6 61 60.7
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 3.4e-13 78.2 57 63.2
Hund22190 Selenicereus undatus HOM05D003620 ORTHO05D004261 3.4e-13 78.2 52 67.3
Lj6g0009012 Lotus japonicus HOM05D003620 ORTHO05D004261 4.4e-13 77.8 58 63.8
CBR_g4358 Chara braunii HOM05D003620 ORTHO05D004261 5.7e-13 77.4 54 61.1
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 9.8e-13 76.6 57 56.1
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 1.3e-12 76.3 57 63.2
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 3.7e-12 74.7 57 64.9
CsaV3_3G020620 Cucumis sativus L. HOM05D003620 ORTHO05D004261 3.7e-12 74.7 57 63.2
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 3.7e-12 74.7 57 57.9
MELO3C003259.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.6e-10 69.3 55 60.0
MELO3C026793.2 Cucumis melo HOM05D003620 ORTHO05D004261 3.8e-09 64.7 46 60.9
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 1.8e-06 55.8 34 73.5


User provided reference genes

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