Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 1.0e-100 370.2 200 100.0
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 1.0e-100 370.2 200 100.0
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 9.3e-94 347.1 202 94.6
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 9.3e-94 347.1 202 94.6
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 7.9e-93 344.0 195 96.4
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 1.3e-87 326.6 204 92.2
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.1e-86 323.6 201 89.6
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 1.2e-85 320.1 201 89.1
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 2.1e-85 319.3 201 89.1
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 2.1e-85 319.3 201 89.1
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 7.9e-85 317.4 201 88.1
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 5.1e-84 314.7 203 88.7
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 5.7e-83 311.2 204 86.8
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 1.1e-81 307.0 204 86.8
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 1.0e-76 290.4 203 82.3
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 5.1e-76 288.1 204 82.4
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.5e-75 286.6 204 82.4
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 4.8e-74 281.6 204 80.9
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.8e-73 279.6 204 80.4
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 5.0e-71 271.6 196 77.6
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 1.6e-69 266.5 204 78.9
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 1.6e-69 266.5 200 78.0
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 1.3e-58 230.3 201 69.7
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 2.2e-58 229.6 199 69.3
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 3.5e-56 222.2 199 66.8
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 5.5e-54 214.9 199 65.3
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 3.4e-51 205.7 210 61.4
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 4.8e-50 201.8 206 63.1
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.8e-50 201.8 206 63.1
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 1.4e-49 200.3 214 61.2
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 1.8e-49 199.9 214 60.7
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 1.8e-49 199.9 206 61.7
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 4.1e-49 198.7 215 60.0
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 9.1e-49 197.6 209 58.9
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 3.5e-48 195.7 208 58.2
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 3.5e-48 195.7 209 62.7
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 3.5e-48 195.7 214 59.8
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 4.5e-48 195.3 206 61.2
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 4.5e-48 195.3 201 58.7
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.5e-48 195.3 206 62.6
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.9e-48 194.9 206 62.1
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.9e-48 194.9 206 62.1
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 5.9e-48 194.9 208 60.6
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.0e-47 194.1 214 58.9
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 1.0e-47 194.1 200 59.0
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 1.3e-47 193.7 216 59.3
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 1.7e-47 193.4 210 57.1
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 2.3e-47 193.0 214 58.9
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.9e-47 192.6 204 62.7
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 2.9e-47 192.6 193 59.1
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 3.8e-47 192.2 206 61.7
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 5.0e-47 191.8 212 59.4
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 8.6e-47 191.0 206 58.3
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 8.6e-47 191.0 198 59.6
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 8.6e-47 191.0 207 57.0
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.9e-46 189.9 207 58.9
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 2.5e-46 189.5 205 59.0
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 2.5e-46 189.5 205 54.1
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 3.3e-46 189.1 209 56.5
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 4.2e-46 188.7 206 59.2
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 4.2e-46 188.7 213 57.7
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 5.5e-46 188.3 207 60.4
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 9.5e-46 187.6 212 57.5
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.2e-45 187.2 216 57.9
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 1.2e-45 187.2 216 57.9
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 2.1e-45 186.4 202 57.9
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 2.8e-45 186.0 207 57.0
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 2.8e-45 186.0 216 57.4
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 4.7e-45 185.3 205 55.6
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 4.7e-45 185.3 212 57.1
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 6.1e-45 184.9 208 55.8
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 6.1e-45 184.9 207 59.9
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 8.0e-45 184.5 218 56.4
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 8.0e-45 184.5 214 57.0
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 8.0e-45 184.5 211 58.8
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 8.0e-45 184.5 208 57.2
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.4e-44 183.7 205 57.6
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 1.8e-44 183.3 208 55.3
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 2.3e-44 183.0 213 55.9
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 3.0e-44 182.6 206 59.2
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 4.0e-44 182.2 217 56.7
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 5.2e-44 181.8 209 58.4
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 5.2e-44 181.8 208 58.7
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 5.2e-44 181.8 205 58.0
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 5.2e-44 181.8 203 60.1
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 5.2e-44 181.8 207 58.5
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 6.8e-44 181.4 207 58.9
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 6.8e-44 181.4 180 62.8
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 6.8e-44 181.4 208 56.7
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 8.9e-44 181.0 205 55.1
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.5e-43 180.3 205 57.1
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 1.5e-43 180.3 214 57.5
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.0e-43 179.9 204 56.4
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 2.0e-43 179.9 212 56.6
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 2.6e-43 179.5 205 55.6
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 2.6e-43 179.5 213 55.9
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 3.4e-43 179.1 219 54.8
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 3.4e-43 179.1 205 58.0
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 3.4e-43 179.1 212 55.7
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 4.4e-43 178.7 214 54.2
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 5.7e-43 178.3 206 56.8
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 7.5e-43 177.9 206 56.3
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 7.5e-43 177.9 214 55.6
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 7.5e-43 177.9 212 53.8
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 9.8e-43 177.6 209 55.0
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 9.8e-43 177.6 215 56.7
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 1.3e-42 177.2 206 54.4
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 1.3e-42 177.2 204 55.9
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 1.7e-42 176.8 212 56.6
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 2.8e-42 176.0 207 57.5
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 3.7e-42 175.6 198 60.1
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 3.7e-42 175.6 216 54.2
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 6.3e-42 174.9 206 54.4
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 1.1e-41 174.1 196 55.6
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.1e-41 174.1 203 55.2
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 1.1e-41 174.1 206 54.4
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 1.1e-41 174.1 211 56.4
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 1.8e-41 173.3 206 54.4
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 4.1e-41 172.2 208 54.8
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 7.0e-41 171.4 167 64.7
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 9.2e-41 171.0 210 54.8
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.2e-40 170.6 205 53.7
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 1.6e-40 170.2 209 56.0
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 5.9e-40 168.3 216 54.2
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 1.0e-39 167.5 216 53.7
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 2.9e-39 166.0 214 53.3
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 9.5e-38 161.0 206 52.9
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.2e-37 160.6 210 51.4
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 6.1e-37 158.3 209 54.1
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 6.1e-37 158.3 214 53.3
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.0e-36 157.5 214 54.2
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 6.8e-36 154.8 120 68.3
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 6.4e-34 148.3 155 56.8
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 2.7e-32 142.9 172 54.1
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 6.0e-32 141.7 209 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 6.6e-31 138.3 162 52.5
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 2.1e-29 133.3 150 52.7
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 3.6e-29 132.5 180 52.8
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 6.8e-28 128.3 180 49.4
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.0e-27 126.7 153 47.7
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 9.8e-27 124.4 168 45.8
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.7e-26 123.6 153 45.8
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 2.4e-25 119.8 186 46.2
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 2.7e-24 116.3 158 45.6
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.8e-21 106.3 212 41.0
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 3.6e-21 105.9 148 48.6
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 1.2e-19 100.9 200 40.0
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 5.8e-19 98.6 141 45.4
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.7e-18 97.1 182 42.9
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 6.6e-15 85.1 85 56.5
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 1.1e-14 84.3 150 44.7
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 5.6e-14 82.0 130 40.8
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 9.5e-14 81.3 110 51.8
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.2e-13 80.9 121 47.9
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 1.1e-12 77.8 102 45.1
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.1e-12 76.3 63 63.5
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 6.8e-12 75.1 133 45.1
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.2e-11 74.3 61 63.9
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 1.9e-09 67.0 146 33.6
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 1.0e-07 61.2 155 34.8


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