Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p49930 Brassica napus HOM05D000956 ORTHO05D003111 6.3e-44 180.3 83 100.0
BcaB01g04343 Brassica carinata HOM05D000956 ORTHO05D003111 1.2e-31 139.4 83 75.9
BcaC09g48605 Brassica carinata HOM05D000956 ORTHO05D003111 1.6e-31 139.0 83 77.1
A01p37830 Brassica napus HOM05D000956 ORTHO05D003111 1.6e-31 139.0 83 77.1
BolC1t04757H Brassica oleracea HOM05D000956 ORTHO05D003111 1.6e-31 139.0 83 77.1
BraA01t03844Z Brassica rapa HOM05D000956 ORTHO05D003111 1.6e-31 139.0 83 77.1
C01p47910 Brassica napus HOM05D000956 ORTHO05D003111 2.1e-31 138.7 83 77.1
BcaC05g28878 Brassica carinata HOM05D000956 ORTHO05D003111 4.7e-31 137.5 126 57.9
C05p50010 Brassica napus HOM05D000956 ORTHO05D003111 4.7e-31 137.5 126 57.9
Sp3g19080 Schrenkiella parvula HOM05D000956 ORTHO05D003111 6.1e-31 137.1 83 79.5
AT3G16400 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 7.9e-31 136.7 83 75.9
BraA05t22131Z Brassica rapa HOM05D000956 ORTHO05D003111 7.9e-31 136.7 89 73.0
AT3G16410 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 1.0e-30 136.3 83 75.9
A05p33070 Brassica napus HOM05D000956 ORTHO05D003111 3.0e-30 134.8 89 71.9
BraA05t22133Z Brassica rapa HOM05D000956 ORTHO05D003111 3.0e-30 134.8 127 56.7
A05p33080 Brassica napus HOM05D000956 ORTHO05D003111 3.9e-30 134.4 127 56.7
BolC5t33742H Brassica oleracea HOM05D000956 ORTHO05D003111 3.9e-30 134.4 112 60.7
BolC5t33748H Brassica oleracea HOM05D000956 ORTHO05D003111 3.9e-30 134.4 127 56.7
Thhalv10020667m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 3.9e-30 134.4 83 77.1
AL3G29175 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 5.1e-30 134.0 83 73.5
Sp3g14770 Schrenkiella parvula HOM05D000956 ORTHO05D003111 8.8e-30 133.3 83 73.5
BcaB06g25742 Brassica carinata HOM05D000956 ORTHO05D003111 1.1e-29 132.9 122 56.6
C05p50060 Brassica napus HOM05D000956 ORTHO05D003111 1.1e-29 132.9 83 73.5
Aa31LG8G9090 Aethionema arabicum HOM05D000956 ORTHO05D003111 2.6e-29 131.7 83 74.7
BcaB06g25744 Brassica carinata HOM05D000956 ORTHO05D003111 2.6e-29 131.7 112 58.9
Carub.0003s1614 Capsella rubella HOM05D000956 ORTHO05D003111 2.6e-29 131.7 83 71.1
AL3G29210 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 4.4e-29 131.0 83 73.5
AL348U10010 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 5.7e-29 130.6 83 72.3
AL4G28620 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 5.7e-29 130.6 83 72.3
AT2G33070 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 5.7e-29 130.6 83 72.3
AT3G16390 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 7.4e-29 130.2 83 73.5
BcaC05g28881 Brassica carinata HOM05D000956 ORTHO05D003111 7.4e-29 130.2 122 55.7
C05p50030 Brassica napus HOM05D000956 ORTHO05D003111 7.4e-29 130.2 122 55.7
CARHR091610 Cardamine hirsuta HOM05D000956 ORTHO05D003111 1.3e-28 129.4 77 75.3
A05p33120 Brassica napus HOM05D000956 ORTHO05D003111 1.7e-28 129.0 83 71.1
BraA05t22134Z Brassica rapa HOM05D000956 ORTHO05D003111 1.7e-28 129.0 83 71.1
Carub.0003s1615 Capsella rubella HOM05D000956 ORTHO05D003111 1.7e-28 129.0 81 70.4
Carub.0003s1616 Capsella rubella HOM05D000956 ORTHO05D003111 2.2e-28 128.6 83 68.7
A05p33110 Brassica napus HOM05D000956 ORTHO05D003111 3.7e-28 127.9 123 54.5
BolC5t33753H Brassica oleracea HOM05D000956 ORTHO05D003111 4.8e-28 127.5 123 54.5
BolC5t33756H Brassica oleracea HOM05D000956 ORTHO05D003111 4.8e-28 127.5 123 54.5
BcaB02g10856 Brassica carinata HOM05D000956 ORTHO05D003111 1.1e-27 126.3 125 52.8
Aa31LG8G3550 Aethionema arabicum HOM05D000956 ORTHO05D003111 4.5e-26 120.9 80 71.2
BcaB06g25743 Brassica carinata HOM05D000956 ORTHO05D003111 7.7e-26 120.2 121 51.2
Thhalv10016872m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 6.7e-22 107.1 81 61.7
BcaB06g28597 Brassica carinata HOM05D000956 ORTHO05D003111 1.7e-20 102.4 78 62.8
BcaC02g07917 Brassica carinata HOM05D000956 ORTHO05D003111 2.2e-20 102.1 78 62.8
A04p24960 Brassica napus HOM05D000956 ORTHO05D003111 2.2e-20 102.1 78 62.8
BolC4t27675H Brassica oleracea HOM05D000956 ORTHO05D003111 2.2e-20 102.1 78 62.8
BraA04t18008Z Brassica rapa HOM05D000956 ORTHO05D003111 2.2e-20 102.1 78 62.8
CARHR126320 Cardamine hirsuta HOM05D000956 ORTHO05D003111 3.7e-20 101.3 81 56.8
C04p61990 Brassica napus HOM05D000956 ORTHO05D003111 6.3e-20 100.5 78 61.5
BcaC01g01301 Brassica carinata HOM05D000956 ORTHO05D003111 1.4e-19 99.4 83 56.6
C03p90390 Brassica napus HOM05D000956 ORTHO05D003111 1.4e-19 99.4 83 56.6
BolC3t21362H Brassica oleracea HOM05D000956 ORTHO05D003111 1.4e-19 99.4 83 56.6
BraA06t23421Z Brassica rapa HOM05D000956 ORTHO05D003111 3.1e-19 98.2 83 55.4
A06p02060 Brassica napus HOM05D000956 ORTHO05D003111 4.1e-19 97.8 83 55.4
A05p17750 Brassica napus HOM05D000956 ORTHO05D003111 5.3e-19 97.4 82 57.3
C06p15530 Brassica napus HOM05D000956 ORTHO05D003111 5.3e-19 97.4 82 57.3
BolC6t36745H Brassica oleracea HOM05D000956 ORTHO05D003111 5.3e-19 97.4 82 57.3
BraA05t20667Z Brassica rapa HOM05D000956 ORTHO05D003111 5.3e-19 97.4 82 57.3
AL1G60110 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 7.0e-19 97.1 83 55.4
BcaC08g44157 Brassica carinata HOM05D000956 ORTHO05D003111 9.1e-19 96.7 82 56.1
BcaB02g10871 Brassica carinata HOM05D000956 ORTHO05D003111 2.0e-18 95.5 82 56.1
C06p07330 Brassica napus HOM05D000956 ORTHO05D003111 3.5e-18 94.7 83 53.0
BolC6t35825H Brassica oleracea HOM05D000956 ORTHO05D003111 3.5e-18 94.7 83 53.0
A08p02420 Brassica napus HOM05D000956 ORTHO05D003111 4.5e-18 94.4 83 54.2
BraA08t32281Z Brassica rapa HOM05D000956 ORTHO05D003111 4.5e-18 94.4 83 54.2
CARHR042180 Cardamine hirsuta HOM05D000956 ORTHO05D003111 5.9e-18 94.0 83 54.2
BcaC08g43583 Brassica carinata HOM05D000956 ORTHO05D003111 1.0e-17 93.2 82 57.3
A06p00600 Brassica napus HOM05D000956 ORTHO05D003111 1.0e-17 93.2 82 57.3
C06p09820 Brassica napus HOM05D000956 ORTHO05D003111 1.0e-17 93.2 82 57.3
BraA06t23274Z Brassica rapa HOM05D000956 ORTHO05D003111 1.0e-17 93.2 82 57.3
A08p02400 Brassica napus HOM05D000956 ORTHO05D003111 1.7e-17 92.4 83 53.0
Sp1g40470 Schrenkiella parvula HOM05D000956 ORTHO05D003111 1.7e-17 92.4 82 54.9
BcaB02g09167 Brassica carinata HOM05D000956 ORTHO05D003111 2.9e-17 91.7 82 56.1
BcaB07g33298 Brassica carinata HOM05D000956 ORTHO05D003111 2.9e-17 91.7 82 56.1
BcaB07g33430 Brassica carinata HOM05D000956 ORTHO05D003111 3.8e-17 91.3 82 57.3
C03p90400 Brassica napus HOM05D000956 ORTHO05D003111 3.8e-17 91.3 83 51.8
BcaC01g01302 Brassica carinata HOM05D000956 ORTHO05D003111 5.0e-17 90.9 83 51.8
BolC3t21363H Brassica oleracea HOM05D000956 ORTHO05D003111 5.0e-17 90.9 83 51.8
Carub.0001s4095 Capsella rubella HOM05D000956 ORTHO05D003111 1.9e-16 89.0 77 54.5
AT1G54040 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 2.5e-16 88.6 83 54.2
AL1G62740 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 3.2e-16 88.2 82 54.9
Sp1g40480 Schrenkiella parvula HOM05D000956 ORTHO05D003111 4.2e-16 87.8 82 52.4
THA.LOC104817954 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 5.5e-16 87.4 82 46.3
Aa31LG8G3530 Aethionema arabicum HOM05D000956 ORTHO05D003111 9.4e-16 86.7 73 58.9
CARHR289380 Cardamine hirsuta HOM05D000956 ORTHO05D003111 2.1e-15 85.5 82 52.4
BcaB07g30521 Brassica carinata HOM05D000956 ORTHO05D003111 3.6e-15 84.7 82 53.7
C02p45050 Brassica napus HOM05D000956 ORTHO05D003111 1.4e-14 82.8 82 53.7
BcaC08g43585 Brassica carinata HOM05D000956 ORTHO05D003111 4.0e-14 81.3 82 52.4
C06p09830 Brassica napus HOM05D000956 ORTHO05D003111 4.0e-14 81.3 82 52.4
BolC6t36054H Brassica oleracea HOM05D000956 ORTHO05D003111 4.0e-14 81.3 82 52.4
Aa31LG8G3560 Aethionema arabicum HOM05D000956 ORTHO05D003111 6.8e-14 80.5 53 73.6
BcaC06g31613 Brassica carinata HOM05D000956 ORTHO05D003111 2.6e-13 78.6 82 48.8
BcaC06g34550 Brassica carinata HOM05D000956 ORTHO05D003111 3.4e-13 78.2 82 48.8
C07p27260 Brassica napus HOM05D000956 ORTHO05D003111 3.4e-13 78.2 82 48.8
BraA06t23299Z Brassica rapa HOM05D000956 ORTHO05D003111 4.4e-13 77.8 86 48.8
MBI15_g31898_MAGBIO Magnolia biondii HOM05D000956 ORTHO05D003111 4.4e-13 77.8 79 46.8
Sp2g18580 Schrenkiella parvula HOM05D000956 ORTHO05D003111 5.7e-13 77.4 76 44.7
BolC7t43256H Brassica oleracea HOM05D000956 ORTHO05D003111 7.5e-13 77.0 82 47.6
A06p47170 Brassica napus HOM05D000956 ORTHO05D003111 9.8e-13 76.6 82 48.8
BraA06t27588Z Brassica rapa HOM05D000956 ORTHO05D003111 9.8e-13 76.6 82 48.8
Psat1g012640 Pisum sativum HOM05D000956 ORTHO05D003111 1.3e-12 76.3 78 46.2
CANSAT64G0601 Cannabis sativa HOM05D000956 ORTHO05D003111 2.2e-12 75.5 79 40.5
C07p38940 Brassica napus HOM05D000956 ORTHO05D003111 2.8e-12 75.1 74 41.9
BolC7t44414H Brassica oleracea HOM05D000956 ORTHO05D003111 2.8e-12 75.1 74 41.9
A06p39330 Brassica napus HOM05D000956 ORTHO05D003111 3.7e-12 74.7 74 41.9
BraA06t26848Z Brassica rapa HOM05D000956 ORTHO05D003111 3.7e-12 74.7 74 41.9
Thhalv10004595m.g Eutrema salsugineum HOM05D000956 ORTHO05D003111 3.7e-12 74.7 76 40.8
AL3G52460 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 4.8e-12 74.3 82 48.8
BcaC06g30820 Brassica carinata HOM05D000956 ORTHO05D003111 4.8e-12 74.3 74 40.5
Ca_27548_v3 Cicer arietinum L. HOM05D000956 ORTHO05D003111 4.8e-12 74.3 78 44.9
TPR.G31389 Trifolium pratense HOM05D000956 ORTHO05D003111 4.8e-12 74.3 78 44.9
BcaB07g33432 Brassica carinata HOM05D000956 ORTHO05D003111 6.3e-12 73.9 82 47.6
Phvul.005G058900 Phaseolus vulgaris HOM05D000956 ORTHO05D003111 8.3e-12 73.6 78 43.6
THA.LOC104822434 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 8.3e-12 73.6 81 39.5
VMungo1080G1252 Vigna mungo HOM05D000956 ORTHO05D003111 1.8e-11 72.4 78 42.3
Medtr2g069030 Medicago truncatula HOM05D000956 ORTHO05D003111 2.4e-11 72.0 78 42.3
Ah.01g013910 Amaranthus hybridus HOM05D000956 ORTHO05D003111 3.1e-11 71.6 79 40.5
AL8G20880 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 3.1e-11 71.6 75 42.7
AT5G48180 Arabidopsis thaliana HOM05D000956 ORTHO05D003111 3.1e-11 71.6 75 44.0
BcaB07g30006 Brassica carinata HOM05D000956 ORTHO05D003111 4.1e-11 71.2 74 40.5
Carub.0008s0777 Capsella rubella HOM05D000956 ORTHO05D003111 4.1e-11 71.2 75 44.0
Sc21g0000550 Simmondsia chinensis HOM05D000956 ORTHO05D003111 4.1e-11 71.2 79 38.0
Eucgr.K03576 Eucalyptus grandis HOM05D000956 ORTHO05D003111 5.4e-11 70.9 79 36.7
PGR044G2578 Punica granatum HOM05D000956 ORTHO05D003111 7.0e-11 70.5 81 40.7
THA.LOC104802626 Tarenaya hassleriana HOM05D000956 ORTHO05D003111 7.0e-11 70.5 82 37.8
A02p37290 Brassica napus HOM05D000956 ORTHO05D003111 9.1e-11 70.1 74 40.5
C02p56320 Brassica napus HOM05D000956 ORTHO05D003111 9.1e-11 70.1 74 40.5
BolC2t11690H Brassica oleracea HOM05D000956 ORTHO05D003111 9.1e-11 70.1 74 40.5
BraA02t08715Z Brassica rapa HOM05D000956 ORTHO05D003111 9.1e-11 70.1 74 40.5
CARHR184150 Cardamine hirsuta HOM05D000956 ORTHO05D003111 9.1e-11 70.1 75 38.7
CiPaw.03G282100 Carya illinoinensis HOM05D000956 ORTHO05D003111 9.1e-11 70.1 79 40.5
Manes.13G061500 Manihot esculenta HOM05D000956 ORTHO05D003111 9.1e-11 70.1 78 39.7
Zm00001eb303740 Zea mays HOM05D000956 ORTHO05D003111 9.1e-11 70.1 79 40.5
Dinv21303 Davidia involucrata HOM05D000956 ORTHO05D003111 1.6e-10 69.3 79 38.0
ECA240G0148 Erigeron canadensis HOM05D000956 ORTHO05D003111 1.6e-10 69.3 82 36.6
Potri.014G168300 Populus trichocarpa HOM05D000956 ORTHO05D003111 1.6e-10 69.3 79 39.2
A06p02090 Brassica napus HOM05D000956 ORTHO05D003111 2.0e-10 68.9 86 45.3
Lj8P136T73 Lonicera japonica HOM05D000956 ORTHO05D003111 2.0e-10 68.9 79 38.0
Lalb_Chr10g0098111 Lupinus albus HOM05D000956 ORTHO05D003111 2.0e-10 68.9 80 41.2
BcaC03g17635 Brassica carinata HOM05D000956 ORTHO05D003111 2.7e-10 68.6 74 40.5
Aa31LG5G18300 Aethionema arabicum HOM05D000956 ORTHO05D003111 3.5e-10 68.2 79 35.4
Aqoxy4G02286 Aquilegia oxysepala HOM05D000956 ORTHO05D003111 3.5e-10 68.2 78 39.7
EL10Ac9g22673 Beta vulgaris HOM05D000956 ORTHO05D003111 3.5e-10 68.2 79 36.7
AUR62015000 Chenopodium quinoa HOM05D000956 ORTHO05D003111 4.5e-10 67.8 79 38.0
Os09g0249000 Oryza sativa ssp. japonica HOM05D000956 ORTHO05D003111 5.9e-10 67.4 79 38.0
Sabra14G0128300 Salix brachista HOM05D000956 ORTHO05D003111 5.9e-10 67.4 79 36.7
Sabra14G0128500 Salix brachista HOM05D000956 ORTHO05D003111 5.9e-10 67.4 79 36.7
CARHR053730 Cardamine hirsuta HOM05D000956 ORTHO05D003111 7.7e-10 67.0 75 36.0
Cc00_g06790 Coffea canephora HOM05D000956 ORTHO05D003111 7.7e-10 67.0 79 34.2
SGA_v2.0_scaffold181G39691 Striga asiatica HOM05D000956 ORTHO05D003111 7.7e-10 67.0 79 36.7
MSTRG.14914 Avicennia marina HOM05D000956 ORTHO05D003111 1.0e-09 66.6 79 34.2
AUR62029121 Chenopodium quinoa HOM05D000956 ORTHO05D003111 1.7e-09 65.9 79 38.0
DCAR_019226 Daucus carota HOM05D000956 ORTHO05D003111 1.7e-09 65.9 79 34.2
BcaC08g43365 Brassica carinata HOM05D000956 ORTHO05D003111 3.8e-09 64.7 67 49.3
Actinidia07864 Actinidia chinensis HOM05D000956 ORTHO05D003111 1.1e-08 63.2 80 36.2
BcaC03g16669 Brassica carinata HOM05D000956 ORTHO05D003111 1.1e-08 63.2 82 41.5
MD17G1117500 Malus domestica HOM05D000956 ORTHO05D003111 1.1e-08 63.2 79 38.0
Aa31LG2G20370 Aethionema arabicum HOM05D000956 ORTHO05D003111 1.5e-08 62.8 71 38.0
Prupe.3G197100 Prunus persica HOM05D000956 ORTHO05D003111 2.5e-08 62.0 79 36.7
HanXRQChr03g0075051 Helianthus annuus HOM05D000956 ORTHO05D003111 3.2e-08 61.6 79 34.2
CDE10G1226 Ceratophyllum demersum HOM05D000956 ORTHO05D003111 5.5e-08 60.8 78 37.2
Cpa.g.sc136.33 Carica papaya HOM05D000956 ORTHO05D003111 7.2e-08 60.5 83 33.7
BcaC09g48640 Brassica carinata HOM05D000956 ORTHO05D003111 9.4e-08 60.1 76 40.8
Migut.M00049 Erythranthe guttata HOM05D000956 ORTHO05D003111 1.2e-07 59.7 80 35.0
AL3G29450 Arabidopsis lyrata HOM05D000956 ORTHO05D003111 2.7e-07 58.5 66 42.4
FAN02G3046 Fragaria x ananassa HOM05D000956 ORTHO05D003111 3.6e-07 58.2 72 38.9
MD09G1127800 Malus domestica HOM05D000956 ORTHO05D003111 2.3e-06 55.5 79 34.2


User provided reference genes

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