Gene: AT5G48180
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G48180
- Transcript Identifier AT5G48180.1
- Gene Type Coding gene
- Location Chr5 : 19541283-19542358 : negative
Gene Family Information
- ID HOM05D000956
- #Genes/#Species 627/88
- Phylogenetic origin
- ID ORTHO05D003111
- #Genes/#Species 244/91
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G48180.1
- symbol NSP5
- Alias AtNSP5
- uniprot Q93XW5
Descriptions
- Description nitrile specifier protein 5
- Computational description nitrile specifier protein 5 (NSP5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glucosinolate catabolic process, nitrile biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT3G07720.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019762 | IDA | Gene Ontology | glucosinolate catabolic process | 1 |
| GO:0080028 | IDA IBA | Gene Ontology | nitrile biosynthetic process | 1 2 |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030234 | IBA | Gene Ontology | enzyme regulator activity | 2 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0030246 | ISO | PLAZA Homology (enrichment) | carbohydrate binding | HOM05D000956 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA IBA | Gene Ontology | cytosol | 2 3 |
| GO:0009536 | HDA | Gene Ontology | plastid | 4 |
| GO:0005634 | IBA | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |