Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p44870 Brassica napus HOM05D003132 ORTHO05D003736 1.3e-44 182.6 84 100.0
BcaC05g28420 Brassica carinata HOM05D003132 ORTHO05D003736 1.3e-17 92.8 70 68.6
A05p29830 Brassica napus HOM05D003132 ORTHO05D003736 1.3e-17 92.8 70 68.6
C05p45020 Brassica napus HOM05D003132 ORTHO05D003736 1.3e-17 92.8 70 68.6
BolC5t33226H Brassica oleracea HOM05D003132 ORTHO05D003736 1.3e-17 92.8 70 68.6
BraA05t21832Z Brassica rapa HOM05D003132 ORTHO05D003736 1.3e-17 92.8 70 68.6
BcaB06g26045 Brassica carinata HOM05D003132 ORTHO05D003736 5.1e-17 90.9 70 67.1
Thhalv10012815m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 1.6e-15 85.9 70 65.7
Carub.0003s1964 Capsella rubella HOM05D003132 ORTHO05D003736 2.8e-15 85.1 70 62.9
Thhalv10020497m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 2.8e-15 85.1 70 64.3
AT5G09320 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 4.7e-15 84.3 70 61.4
AL3G33220 Arabidopsis lyrata HOM05D003132 ORTHO05D003736 2.4e-14 82.0 70 61.4
AT3G19770 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 2.4e-14 82.0 70 61.4
Sp6g33990 Schrenkiella parvula HOM05D003132 ORTHO05D003736 8.9e-14 80.1 70 64.3
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 1.5e-13 79.3 70 60.0
A10p27920 Brassica napus HOM05D003132 ORTHO05D003736 2.6e-13 78.6 70 61.4
BraA10t44841Z Brassica rapa HOM05D003132 ORTHO05D003736 2.6e-13 78.6 70 61.4
CARHR095280 Cardamine hirsuta HOM05D003132 ORTHO05D003736 2.6e-13 78.6 70 60.0
BcaB08g37215 Brassica carinata HOM05D003132 ORTHO05D003736 5.8e-13 77.4 70 60.0
C09p68030 Brassica napus HOM05D003132 ORTHO05D003736 5.8e-13 77.4 70 60.0
CARHR204070 Cardamine hirsuta HOM05D003132 ORTHO05D003736 3.8e-12 74.7 70 55.7
THA.LOC104806806 Tarenaya hassleriana HOM05D003132 ORTHO05D003736 2.4e-11 72.0 70 54.3
Carub.0006s0787 Capsella rubella HOM05D003132 ORTHO05D003736 3.2e-11 71.6 70 54.3
CiPaw.06G024400 Carya illinoinensis HOM05D003132 ORTHO05D003736 3.2e-11 71.6 70 50.0
Lsat_1_v5_gn_2_115101 Lactuca sativa HOM05D003132 ORTHO05D003736 2.1e-10 68.9 70 48.6
AUR62004688 Chenopodium quinoa HOM05D003132 ORTHO05D003736 2.7e-10 68.6 70 51.4
Medtr3g073360 Medicago truncatula HOM05D003132 ORTHO05D003736 3.5e-10 68.2 70 50.0
AUR62023605 Chenopodium quinoa HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 51.4
Ca_25763_v3 Cicer arietinum L. HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 51.4
Gorai.010G046700 Gossypium raimondii HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 51.4
MD00G1104300 Malus domestica HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 50.0
MD15G1358700 Malus domestica HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 50.0
TPR.G32950 Trifolium pratense HOM05D003132 ORTHO05D003736 6.0e-10 67.4 70 51.4
Cfa015956 Carpinus fangiana HOM05D003132 ORTHO05D003736 7.8e-10 67.0 70 47.1
Lalb_Chr11g0065661 Lupinus albus HOM05D003132 ORTHO05D003736 7.8e-10 67.0 70 52.9
Hund20801 Selenicereus undatus HOM05D003132 ORTHO05D003736 1.0e-09 66.6 70 51.4
TAR628G0266 Trochodendron aralioides HOM05D003132 ORTHO05D003736 1.0e-09 66.6 70 50.0
COL.COLO4_21818 Corchorus olitorius HOM05D003132 ORTHO05D003736 1.3e-09 66.2 70 48.6
Gohir.A06G040500 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.3e-09 66.2 70 50.0
Gohir.D06G041500 Gossypium hirsutum HOM05D003132 ORTHO05D003736 1.3e-09 66.2 70 50.0
Psat5g133920 Pisum sativum HOM05D003132 ORTHO05D003736 1.3e-09 66.2 70 50.0
Atru.chr13.1311 Acer truncatum HOM05D003132 ORTHO05D003736 1.7e-09 65.9 70 48.6
Atru.chr13.1355 Acer truncatum HOM05D003132 ORTHO05D003736 1.7e-09 65.9 70 48.6
HanXRQChr14g0440811 Helianthus annuus HOM05D003132 ORTHO05D003736 2.3e-09 65.5 70 45.7
Sc01g0001580 Simmondsia chinensis HOM05D003132 ORTHO05D003736 3.0e-09 65.1 70 50.0
ClCG06G009880 Citrullus lanatus HOM05D003132 ORTHO05D003736 3.9e-09 64.7 70 51.4
MELO3C008519.2 Cucumis melo HOM05D003132 ORTHO05D003736 3.9e-09 64.7 70 51.4
PSO017G5000 Papaver somniferum HOM05D003132 ORTHO05D003736 3.9e-09 64.7 70 47.1
PSO170G1030 Papaver somniferum HOM05D003132 ORTHO05D003736 3.9e-09 64.7 70 47.1
TWI56G0630 Tripterygium wilfordii HOM05D003132 ORTHO05D003736 3.9e-09 64.7 70 48.6
Actinidia29433 Actinidia chinensis HOM05D003132 ORTHO05D003736 5.1e-09 64.3 70 45.7
Cpa.g.sc828.2 Carica papaya HOM05D003132 ORTHO05D003736 5.1e-09 64.3 70 47.1
ECA238G0880 Erigeron canadensis HOM05D003132 ORTHO05D003736 5.1e-09 64.3 70 45.7
PGR044G0368 Punica granatum HOM05D003132 ORTHO05D003736 5.1e-09 64.3 75 45.3
Ah.05g172730 Amaranthus hybridus HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 47.1
CsaV3_2G011340 Cucumis sativus L. HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 50.0
Duzib041G0476 Durio zibethinus HOM05D003132 ORTHO05D003736 6.6e-09 63.9 69 47.8
Eucgr.F03739 Eucalyptus grandis HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 50.0
Rhsim11G0064900 Rhododendron simsii HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 47.1
Sed0019762 Sechium edule HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 50.0
Thecc.08G116200 Theobroma cacao HOM05D003132 ORTHO05D003736 6.6e-09 63.9 70 47.1
EL10Ac1g00043 Beta vulgaris HOM05D003132 ORTHO05D003736 8.7e-09 63.5 70 47.1
Potri.005G171500 Populus trichocarpa HOM05D003132 ORTHO05D003736 8.7e-09 63.5 70 47.1
arahy.Tifrunner.gnm1.ann1.KS02B5 Arachis hypogaea HOM05D003132 ORTHO05D003736 1.1e-08 63.2 70 47.1
arahy.Tifrunner.gnm1.ann1.M9VU1N Arachis hypogaea HOM05D003132 ORTHO05D003736 1.1e-08 63.2 70 47.1
Lj1g0008302 Lotus japonicus HOM05D003132 ORTHO05D003736 1.1e-08 63.2 70 48.6
Sabra05G0129000 Salix brachista HOM05D003132 ORTHO05D003736 1.1e-08 63.2 70 47.1
GSVIVG01008947001 Vitis vinifera HOM05D003132 ORTHO05D003736 1.9e-08 62.4 70 47.1
Ciclev10001011m.g Citrus clementina HOM05D003132 ORTHO05D003736 2.5e-08 62.0 70 47.1
Oeu039582.2 Olea europaea HOM05D003132 ORTHO05D003736 3.3e-08 61.6 75 45.3
vmacro00793 Vaccinium macrocarpon HOM05D003132 ORTHO05D003736 3.3e-08 61.6 70 47.1
Glyma.06G108200 Glycine max HOM05D003132 ORTHO05D003736 4.3e-08 61.2 70 45.7
MBI03_g11133_MAGBIO Magnolia biondii HOM05D003132 ORTHO05D003736 4.3e-08 61.2 70 48.6
Nitab4.5_0002247g0160 Nicotiana tabacum HOM05D003132 ORTHO05D003736 4.3e-08 61.2 70 44.3
Nitab4.5_0004014g0020 Nicotiana tabacum HOM05D003132 ORTHO05D003736 4.3e-08 61.2 70 44.3
Phvul.009G026000 Phaseolus vulgaris HOM05D003132 ORTHO05D003736 4.3e-08 61.2 70 45.7
Aqoxy5G02472 Aquilegia oxysepala HOM05D003132 ORTHO05D003736 5.6e-08 60.8 70 47.1
Dinv26724 Davidia involucrata HOM05D003132 ORTHO05D003736 5.6e-08 60.8 70 45.7
VMungo1309G0264 Vigna mungo HOM05D003132 ORTHO05D003736 5.6e-08 60.8 70 44.3
Peaxi162Scf00647g00129 Petunia axillaris HOM05D003132 ORTHO05D003736 7.3e-08 60.5 70 42.9
Cc00_g24650 Coffea canephora HOM05D003132 ORTHO05D003736 9.6e-08 60.1 70 44.3
Nn1g08540 Nelumbo nucifera HOM05D003132 ORTHO05D003736 9.6e-08 60.1 70 45.7
DCAR_020428 Daucus carota HOM05D003132 ORTHO05D003736 1.2e-07 59.7 70 45.7
Glyma.04G254000 Glycine max HOM05D003132 ORTHO05D003736 1.2e-07 59.7 70 45.7
SalBow7G2329 Salvia bowleyana HOM05D003132 ORTHO05D003736 1.2e-07 59.7 70 45.7
SalBow7G4391 Salvia bowleyana HOM05D003132 ORTHO05D003736 1.2e-07 59.7 70 45.7
Dinv27388 Davidia involucrata HOM05D003132 ORTHO05D003736 1.6e-07 59.3 70 45.7
CAN.G134.60 Capsicum annuum HOM05D003132 ORTHO05D003736 2.1e-07 58.9 70 42.9
Migut.C01198 Erythranthe guttata HOM05D003132 ORTHO05D003736 2.1e-07 58.9 70 45.7
Lj7C306G6 Lonicera japonica HOM05D000316 ORTHO05D000374 2.1e-07 58.9 70 45.7
Solyc01g096990.4 Solanum lycopersicum HOM05D003132 ORTHO05D003736 2.1e-07 58.9 70 42.9
PGSC0003DMG400027521 Solanum tuberosum HOM05D003132 ORTHO05D003736 2.1e-07 58.9 70 42.9
CSS0019182 Camellia sinensis var. sinensis HOM05D003132 ORTHO05D003736 2.8e-07 58.5 70 42.9
FvH4_5g38820 Fragaria vesca HOM05D003132 ORTHO05D003736 2.8e-07 58.5 70 45.7
FAN08G0026 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.8e-07 58.5 70 45.7
FAN13G2880 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.8e-07 58.5 70 45.7
FAN18G1429 Fragaria x ananassa HOM05D003132 ORTHO05D003736 2.8e-07 58.5 70 45.7
FAN04G1930 Fragaria x ananassa HOM05D003132 ORTHO05D003736 3.6e-07 58.2 70 45.7
RcHm_v2.0_Chr7g0240821 Rosa chinensis HOM05D003132 ORTHO05D003736 3.6e-07 58.2 70 45.7
ECA246G0273 Erigeron canadensis HOM05D003132 ORTHO05D003736 8.1e-07 57.0 70 40.0
Lsat_1_v5_gn_9_67980 Lactuca sativa HOM05D003132 ORTHO05D003736 8.1e-07 57.0 70 38.6
TAR624G0618 Trochodendron aralioides HOM05D003132 ORTHO05D003736 8.1e-07 57.0 70 44.3
unitig_21.g20190 Utricularia gibba HOM05D003132 ORTHO05D003736 8.1e-07 57.0 70 45.7
HPP92_002181 Vanilla planifolia HOM05D003132 ORTHO05D003736 8.1e-07 57.0 70 47.1
HanXRQChr15g0496671 Helianthus annuus HOM05D003132 ORTHO05D003736 1.8e-06 55.8 70 37.1
ATR0171G023 Amborella trichopoda HOM05D003132 ORTHO05D003736 2.4e-06 55.5 70 42.9
SGA_v2.0_scaffold118G32441 Striga asiatica HOM05D003132 ORTHO05D003736 2.4e-06 55.5 75 44.0
SGA_v2.0_scaffold28G12034 Striga asiatica HOM05D003132 ORTHO05D003736 2.4e-06 55.5 70 42.9
CDE06G0428 Ceratophyllum demersum HOM05D003132 ORTHO05D003736 3.1e-06 55.1 70 44.3
SMO356G0397 Selaginella moellendorffii HOM05D003132 ORTHO05D003736 6.9e-06 53.9 72 38.9


User provided reference genes

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