Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25955 Brassica carinata HOM05D008570 ORTHO05D005639 9.1e-84 314.3 272 100.0
C05p19040 Brassica napus HOM05D008570 ORTHO05D005639 9.1e-84 314.3 272 100.0
BolC5t30605H Brassica oleracea HOM05D008570 ORTHO05D005639 3.8e-82 308.9 275 98.2
BraA06t24754Z Brassica rapa HOM05D008570 ORTHO05D005639 4.5e-75 285.4 274 94.5
BNapus_Darmor_BZH_scaffold_170p00020 Brassica napus HOM05D008570 ORTHO05D005639 6.3e-69 265.0 187 97.3
BcaB07g32047 Brassica carinata HOM05D008570 ORTHO05D005639 6.4e-61 238.4 275 84.7
Sp1g18160 Schrenkiella parvula HOM05D008570 ORTHO05D005639 3.2e-52 209.5 194 82.5
A07p15670 Brassica napus HOM05D008570 ORTHO05D005639 1.6e-40 170.6 192 75.5
A07p15780 Brassica napus HOM05D008570 ORTHO05D005639 1.6e-40 170.6 192 75.5
Thhalv10008313m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 2.8e-40 169.9 191 73.8
BcaNung03383 Brassica carinata HOM05D008570 ORTHO05D005639 1.1e-39 167.9 190 74.7
C07p23020 Brassica napus HOM05D008570 ORTHO05D005639 1.1e-39 167.9 190 74.7
BraA07t29305Z Brassica rapa HOM05D008570 ORTHO05D005639 1.1e-39 167.9 192 75.0
BolC7t42843H Brassica oleracea HOM05D008570 ORTHO05D005639 1.8e-39 167.2 192 75.0
Carub.0001s1992 Capsella rubella HOM05D008570 ORTHO05D005639 5.2e-39 165.6 186 73.1
BcaB03g14320 Brassica carinata HOM05D008570 ORTHO05D005639 2.2e-37 160.2 272 64.0
AL1G33380 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 5.8e-30 135.6 274 66.1
AT1G20450 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 4.2e-28 129.4 275 65.5
AL1G33370 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.9e-25 120.6 185 64.3
AT1G20440 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 5.6e-25 119.0 185 64.3
Carub.0001s1991 Capsella rubella HOM05D008570 ORTHO05D005639 5.6e-25 119.0 212 55.7
CARHR020900 Cardamine hirsuta HOM05D008570 ORTHO05D005639 6.9e-23 112.1 181 61.9
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 2.5e-17 93.6 179 55.3
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 2.5e-17 93.6 179 55.3
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 6.2e-16 89.0 186 52.2
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 8.1e-16 88.6 180 52.2
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 1.1e-15 88.2 177 56.5
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 1.1e-15 88.2 170 52.9
CARHR069730 Cardamine hirsuta HOM05D008570 ORTHO05D005639 5.8e-14 82.4 168 53.6
C02p33360 Brassica napus HOM05D008570 ORTHO05D005639 2.2e-13 80.5 180 50.6
Sp5g31320 Schrenkiella parvula HOM05D008570 ORTHO05D005639 6.4e-13 79.0 76 67.1
AL2G36240 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.2e-11 74.7 156 53.2
BraA07t31704Z Brassica rapa HOM05D008570 ORTHO05D005639 2.1e-11 73.9 179 56.4
A07p41750 Brassica napus HOM05D008570 ORTHO05D005639 2.7e-11 73.6 179 56.4
BraA02t07079Z Brassica rapa HOM05D008570 ORTHO05D005639 3.5e-11 73.2 180 56.1
Thhalv10008706m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 3.5e-11 73.2 186 44.1
BcaC08g47112 Brassica carinata HOM05D008570 ORTHO05D005639 7.9e-11 72.0 183 56.3
A02p20480 Brassica napus HOM05D008570 ORTHO05D005639 7.9e-11 72.0 180 55.6
C06p50130 Brassica napus HOM05D008570 ORTHO05D005639 2.3e-10 70.5 184 56.0
BcaB05g24972 Brassica carinata HOM05D008570 ORTHO05D005639 5.1e-10 69.3 172 56.4
Thhalv10019152m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 6.7e-10 68.9 176 56.8
THA.LOC104813763 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 6.7e-10 68.9 65 61.5
C06p32190 Brassica napus HOM05D008570 ORTHO05D005639 1.9e-09 67.4 173 56.6
AT1G76180 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 2.5e-09 67.0 89 52.8
Aa31LG4G6290 Aethionema arabicum HOM05D008570 ORTHO05D005639 8.1e-08 62.0 176 54.0
Aa31LG7G4750 Aethionema arabicum HOM05D008570 ORTHO05D059195 8.1e-08 62.0 50 68.0
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 3.4e-06 56.6 97 48.5


User provided reference genes

Program Settings