Gene: Thhalv10008313m.g
General Information
Structural Information
- Species Eutrema salsugineum
- Gene Identifier Thhalv10008313m.g
- Transcript Identifier Thhalv10008313m
- Gene Type Coding gene
- Location scaffold_5 : 8467947-8470201 : positive
Gene Family Information
- ID HOM05D008570
- #Genes/#Species 49/13
- Phylogenetic origin
- ID ORTHO05D005639
- #Genes/#Species 154/81
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Thhalv10008313m.g.v1.0
- pacid 20186684
Descriptions
- Description PTHR33346:SF2 - DEHYDRIN COR47-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090559 | ISO | PLAZA Integrative Orthology | regulation of membrane permeability | AT1G20450 |
| GO:0050821 | ISO | PLAZA Integrative Orthology | protein stabilization | AT1G20450 |
| GO:0010029 | ISO | PLAZA Integrative Orthology | regulation of seed germination | AT1G20450 |
| GO:0009415 | IEA | InterPro | response to water | |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G20450 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G20450 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G20450 |
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT1G20450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031210 | ISO | PLAZA Integrative Orthology | phosphatidylcholine binding | AT1G20450 |
| GO:0016151 | ISO | PLAZA Integrative Orthology | nickel cation binding | AT1G20450 |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT1G20450 |
| GO:0003779 | ISO | PLAZA Integrative Orthology | actin binding | AT1G20450 |
| GO:0001786 | ISO | PLAZA Integrative Orthology | phosphatidylserine binding | AT1G20450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G20450 |
| GO:0019898 | ISO | PLAZA Integrative Orthology | extrinsic component of membrane | AT1G20450 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G20450 |
| GO:0015629 | ISO | PLAZA Integrative Orthology | actin cytoskeleton | AT1G20450 |
| GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT1G20450 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G20450 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000167 | Dehydrin |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |