Gene: AT1G20440
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G20440
- Transcript Identifier AT1G20440.1
- Gene Type Coding gene
- Location Chr1 : 7084722-7085664 : negative
Gene Family Information
- ID HOM05D008570
- #Genes/#Species 49/13
- Phylogenetic origin
- ID ORTHO05D005639
- #Genes/#Species 154/81
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G20440.1
- symbol COR47
- Alias AtCOR47,RD17
- uniprot P31168
Descriptions
- Description cold-regulated 47
- Computational description cold-regulated 47 (COR47); CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT1G20450.1); Has 14264 Blast hits to 8754 proteins in 735 species: Archae - 48; Bacteria - 976; Metazoa - 4799; Fungi - 1094; Plants - 2502; Viruses - 117; Other Eukaryotes - 4728 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009415 | IEA | GOA Database | response to water | |
| GO:0009415 | IEA | InterPro | response to water | |
| GO:0009414 | IMP IBA | Gene Ontology | response to water deprivation | 1 2 |
| GO:0009631 | IGI ISS, IBA | Gene Ontology | cold acclimation | 2 3 4 |
| GO:0009737 | IMP IBA | Gene Ontology | response to abscisic acid | 2 5 |
| GO:0009408 | IEP | Gene Ontology | response to heat | 6 |
| GO:0050832 | IEP | Gene Ontology | defense response to fungus | 7 |
| GO:0010286 | IEP | Gene Ontology | heat acclimation | 8 |
| GO:0009409 | IEP | Gene Ontology | response to cold | 9 |
| GO:0006970 | IGI | Gene Ontology | response to osmotic stress | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IDA | GOA Database | copper ion binding | |
| GO:0016151 | IDA | GOA Database | nickel cation binding | |
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 10 |
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA IBA | Gene Ontology | cytosol | 2 11 |
| GO:0016020 | IBA | Gene Ontology | membrane | 2 |
| GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 12 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000167 | Dehydrin |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |