Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 2.3e-165 585.5 294 100.0
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 1.5e-164 582.8 294 99.3
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 7.4e-164 580.5 294 99.0
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 3.1e-162 575.1 294 98.0
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 4.0e-162 574.7 294 98.0
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.6e-161 572.0 294 97.3
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 3.1e-154 548.5 294 92.9
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 3.1e-154 548.5 294 92.9
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.2e-153 546.6 294 92.5
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.5e-153 546.2 294 92.2
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 2.0e-153 545.8 294 92.5
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.4e-151 539.7 294 91.5
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 3.2e-151 538.5 291 92.4
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 7.2e-151 537.3 294 90.8
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 1.0e-149 533.5 294 90.1
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 4.3e-148 528.1 294 89.5
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 9.7e-148 526.9 294 89.5
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 2.2e-147 525.8 294 89.5
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 2.2e-147 525.8 294 88.8
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.6e-145 518.8 294 87.4
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 3.4e-145 518.5 294 87.1
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 1.0e-144 516.9 294 88.1
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 1.7e-144 516.2 294 88.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 5.0e-144 514.6 294 87.8
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 1.1e-143 513.5 294 86.4
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 1.4e-143 513.1 293 86.0
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.9e-143 512.7 294 86.4
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.9e-143 512.7 294 86.4
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.9e-143 512.7 294 86.4
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.2e-143 511.5 294 86.1
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.2e-143 511.5 294 86.1
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 7.2e-143 510.8 294 86.7
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 3.6e-142 508.4 291 86.3
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.5e-140 503.1 291 84.9
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 7.4e-140 500.7 289 84.8
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 9.7e-140 500.4 292 84.2
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.8e-139 498.8 292 83.9
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 3.1e-138 495.4 292 83.2
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.1e-138 495.4 292 83.6
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 6.9e-138 494.2 289 82.4
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 6.9e-138 494.2 289 84.4
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 1.5e-137 493.0 291 82.1
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 1.5e-137 493.0 289 82.7
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 1.5e-137 493.0 289 82.0
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 2.6e-137 492.3 291 83.8
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 4.5e-137 491.5 289 82.0
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 5.9e-137 491.1 291 82.8
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 8.5e-136 487.3 294 82.7
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 4.2e-135 485.0 291 82.8
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 4.2e-135 485.0 290 81.7
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 2.1e-134 482.6 293 79.5
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 4.7e-134 481.5 290 81.4
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 6.1e-134 481.1 289 82.0
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.4e-133 479.9 289 82.4
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.3e-133 479.2 291 81.4
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.9e-133 478.4 291 81.4
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 3.9e-133 478.4 294 80.6
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 8.8e-133 477.2 289 80.6
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 2.6e-132 475.7 294 81.6
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.3e-132 475.3 289 81.0
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.7e-132 474.6 294 80.6
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.7e-132 474.6 294 80.6
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 2.2e-131 472.6 306 78.4
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 4.8e-131 471.5 288 80.2
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 81.0
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 1.4e-130 469.9 289 79.2
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 3.1e-130 468.8 289 79.9
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 4.1e-130 468.4 290 80.0
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 4.1e-130 468.4 289 78.2
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 7.0e-130 467.6 292 78.8
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 7.0e-130 467.6 289 78.2
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 9.1e-130 467.2 293 78.8
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 77.9
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 78.9
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 4.5e-129 464.9 289 77.9
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 4.5e-129 464.9 289 78.5
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 7.7e-129 464.2 291 78.7
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 1.0e-128 463.8 292 78.8
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 1.3e-128 463.4 291 78.0
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 1.3e-128 463.4 289 77.9
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.7e-128 463.0 294 78.2
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.9e-128 462.2 294 78.6
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 3.8e-128 461.8 294 78.6
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 6.5e-128 461.1 291 79.4
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 8.5e-128 460.7 301 76.4
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 8.5e-128 460.7 290 79.7
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.1e-127 460.3 289 76.1
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 1.1e-127 460.3 294 78.2
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 1.5e-127 459.9 286 79.7
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.5e-127 459.9 289 78.9
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.5e-127 459.9 294 79.3
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.9e-127 459.5 289 78.2
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 2.5e-127 459.1 289 77.2
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 3.2e-127 458.8 294 78.9
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 4.2e-127 458.4 290 78.3
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 5.5e-127 458.0 293 77.5
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 9.4e-127 457.2 294 78.9
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.2e-126 456.8 289 76.8
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 1.6e-126 456.4 289 78.2
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.1e-126 456.1 289 77.9
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 6.1e-126 454.5 292 77.7
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.8e-125 453.0 329 72.0
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 3.0e-125 452.2 289 76.5
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 4.0e-125 451.8 291 77.3
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 6.7e-125 451.1 288 79.2
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 7.5e-124 447.6 286 76.2
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 7.5e-124 447.6 289 75.1
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 1.7e-123 446.4 289 75.8
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 8.2e-123 444.1 301 73.4
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 1.8e-122 443.0 286 75.5
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 3.1e-122 442.2 289 74.0
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 3.1e-122 442.2 295 75.3
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 4.1e-122 441.8 286 75.9
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.1e-122 440.7 292 76.4
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.2e-121 440.3 305 72.5
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 7.7e-121 437.6 292 76.0
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 2.2e-120 436.0 309 71.5
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 2.9e-120 435.6 293 73.7
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 1.5e-119 433.3 294 73.5
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 5.5e-119 431.4 289 73.0
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 7.2e-119 431.0 274 77.7
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 3.6e-118 428.7 294 72.8
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 6.1e-118 427.9 296 72.6
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.0e-117 427.2 296 72.6
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 5.2e-117 424.9 293 73.0
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.2e-116 423.7 260 81.5
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.7e-115 418.7 447 53.5
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 5.9e-113 411.4 306 71.2
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 2.9e-112 409.1 286 71.3
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.0e-112 408.3 291 73.2
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 8.5e-112 407.5 311 68.5
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 1.9e-111 406.4 293 68.6
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 2.3e-109 399.4 255 76.5
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.5e-108 396.7 289 66.1
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 9.8e-108 394.0 295 66.8
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 4.9e-107 391.7 257 75.1
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 6.3e-107 391.3 297 67.3
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.4e-106 390.2 289 65.4
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 2.4e-106 389.4 231 81.8
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 8.6e-104 380.9 289 63.3
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 1.1e-103 380.6 230 79.6
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 4.7e-102 375.2 287 63.1
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 3.5e-97 359.0 231 74.9
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 2.5e-95 352.8 297 63.3
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 9.8e-92 340.9 294 57.1
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.9e-82 310.1 269 62.5
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 5.4e-82 308.5 203 75.4
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 5.1e-80 302.0 285 54.4
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 7.3e-79 298.1 287 52.3
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 6.2e-70 268.5 285 48.4
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 6.9e-69 265.0 281 47.3
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 9.9e-68 261.2 285 47.7
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 6.6e-64 248.4 163 71.8
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 7.4e-55 218.4 154 66.9
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 2.4e-53 213.4 151 72.8
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 9.0e-53 211.5 113 91.2
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.2e-49 201.1 139 74.1
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 4.6e-25 119.4 82 72.0
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 3.3e-23 113.2 78 74.4
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 9.7e-23 111.7 82 74.4
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 6.3e-22 109.0 146 43.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.4e-21 107.8 78 73.1
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 1.7e-19 100.9 75 65.3
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 2.9e-19 100.1 61 78.7
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 5.0e-19 99.4 52 92.3
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 8.5e-19 98.6 152 38.8
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 5.5e-18 95.9 83 66.3
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.4e-16 91.3 70 62.9
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.8e-16 90.9 57 73.7
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 7.0e-13 79.0 58 63.8
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 7.0e-13 79.0 58 63.8
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.1e-10 71.6 54 68.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 3.3e-07 60.1 59 61.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 7.5e-07 58.9 46 60.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.3e-06 58.2 38 78.9


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