Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p06200 Brassica napus HOM05D005501 ORTHO05D033049 1.1e-36 156.0 72 100.0
BcaC02g12231 Brassica carinata HOM05D005501 ORTHO05D007485 2.4e-23 111.7 67 80.6
A05p05250 Brassica napus HOM05D005501 ORTHO05D007485 2.4e-23 111.7 67 80.6
C04p06180 Brassica napus HOM05D005501 ORTHO05D007485 2.4e-23 111.7 67 80.6
BraA05t19495Z Brassica rapa HOM05D005501 ORTHO05D007485 9.0e-23 109.8 67 79.1
Sp4g27290 Schrenkiella parvula HOM05D005501 ORTHO05D007485 2.0e-22 108.6 67 76.1
SpUn0031_0030 Schrenkiella parvula HOM05D005501 ORTHO05D007485 2.0e-22 108.6 67 76.1
BolC4t22243H Brassica oleracea HOM05D005501 ORTHO05D007485 2.6e-22 108.2 67 76.1
BcaB02g08945 Brassica carinata HOM05D005501 ORTHO05D007485 7.6e-22 106.7 67 74.6
BcaB02g08946 Brassica carinata HOM05D005501 ORTHO05D007485 7.6e-22 106.7 67 74.6
Carub.0004s2787 Capsella rubella HOM05D005501 ORTHO05D007485 2.2e-21 105.1 67 71.6
Thhalv10001427m.g Eutrema salsugineum HOM05D005501 ORTHO05D007485 2.2e-21 105.1 67 73.1
AT2G45270 Arabidopsis thaliana HOM05D005501 ORTHO05D007485 3.8e-21 104.4 67 71.6
Aa31LG1G26800 Aethionema arabicum HOM05D005501 ORTHO05D007485 5.0e-21 104.0 67 74.6
AL4G44370 Arabidopsis lyrata HOM05D005501 ORTHO05D007485 1.1e-20 102.8 67 70.1
GSVIVG01027664001 Vitis vinifera HOM05D005501 ORTHO05D007485 1.4e-20 102.4 67 70.1
CARHR140480 Cardamine hirsuta HOM05D005501 ORTHO05D007485 3.2e-20 101.3 67 68.7
Nitab4.5_0003912g0080 Nicotiana tabacum HOM05D005501 ORTHO05D007485 5.5e-20 100.5 67 68.7
vmacro13416 Vaccinium macrocarpon HOM05D005501 ORTHO05D007485 5.5e-20 100.5 67 67.2
Dinv43691 Davidia involucrata HOM05D005501 ORTHO05D007485 7.1e-20 100.1 67 70.1
Lj3g0016597 Lotus japonicus HOM05D005501 ORTHO05D007485 7.1e-20 100.1 67 64.2
MBI04_g44162_MAGBIO Magnolia biondii HOM05D005501 ORTHO05D007485 7.1e-20 100.1 70 64.3
TWI14G0369 Tripterygium wilfordii HOM05D005501 ORTHO05D007485 7.1e-20 100.1 67 68.7
Nn1g01133 Nelumbo nucifera HOM05D005501 ORTHO05D007485 9.3e-20 99.8 67 70.1
Sabra14G0047700 Salix brachista HOM05D005501 ORTHO05D007485 9.3e-20 99.8 67 70.1
TPR.G7589 Trifolium pratense HOM05D005501 ORTHO05D007485 9.3e-20 99.8 67 67.2
CANSAT56G2357 Cannabis sativa HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 68.7
Nitab4.5_0001329g0140 Nicotiana tabacum HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 65.7
Phvul.010G081700 Phaseolus vulgaris HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 65.7
QL08p052809 Quercus lobata HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 67.2
Solyc05g050940.4 Solanum lycopersicum HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 68.7
PGSC0003DMG401007021 Solanum tuberosum HOM05D005501 ORTHO05D007485 1.2e-19 99.4 67 68.7
MELO3C006202.2 Cucumis melo HOM05D005501 ORTHO05D007485 1.6e-19 99.0 69 69.6
CsaV3_3G009810 Cucumis sativus L. HOM05D005501 ORTHO05D007485 1.6e-19 99.0 69 69.6
Peaxi162Scf00959g00124 Petunia axillaris HOM05D005501 ORTHO05D007485 1.6e-19 99.0 67 67.2
ClCG05G002370 Citrullus lanatus HOM05D005501 ORTHO05D007485 2.1e-19 98.6 69 71.0
MSTRG.20738 Avicennia marina HOM05D005501 ORTHO05D007485 2.7e-19 98.2 67 67.2
Migut.B01618 Erythranthe guttata HOM05D005501 ORTHO05D007485 4.6e-19 97.4 67 65.7
PGR042G1853 Punica granatum HOM05D005501 ORTHO05D007485 4.6e-19 97.4 67 71.6
CSS0010588 Camellia sinensis var. sinensis HOM05D005501 ORTHO05D007485 6.1e-19 97.1 67 67.2
CSS0024830 Camellia sinensis var. sinensis HOM05D005501 ORTHO05D007485 6.1e-19 97.1 67 67.2
Glyma.03G027900 Glycine max HOM05D005501 ORTHO05D007485 7.9e-19 96.7 67 64.2
Gohir.D08G156600 Gossypium hirsutum HOM05D005501 ORTHO05D007485 7.9e-19 96.7 67 65.7
Gorai.004G162900 Gossypium raimondii HOM05D005501 ORTHO05D007485 7.9e-19 96.7 67 65.7
Hund17031 Selenicereus undatus HOM05D005501 ORTHO05D007485 7.9e-19 96.7 69 66.7
Sc02g0002650 Simmondsia chinensis HOM05D005501 ORTHO05D007485 7.9e-19 96.7 69 66.7
Ca_19945_v3 Cicer arietinum L. HOM05D005501 ORTHO05D007485 1.0e-18 96.3 67 65.7
Psat0s3070g0040 Pisum sativum HOM05D005501 ORTHO05D007485 1.0e-18 96.3 67 64.2
Potri.014G067800 Populus trichocarpa HOM05D005501 ORTHO05D007485 1.0e-18 96.3 67 67.2
Prupe.2G143300 Prunus persica HOM05D005501 ORTHO05D007485 1.0e-18 96.3 67 67.2
Sed0024444 Sechium edule HOM05D005501 ORTHO05D007485 1.0e-18 96.3 69 68.1
Sopen05g029410 Solanum pennellii HOM05D005501 ORTHO05D007485 1.0e-18 96.3 67 67.2
CiPaw.01G263800 Carya illinoinensis HOM05D005501 ORTHO05D007485 1.8e-18 95.5 67 67.2
Glyma.01G139900 Glycine max HOM05D005501 ORTHO05D033049 1.8e-18 95.5 67 62.7
TAR374G0513 Trochodendron aralioides HOM05D005501 ORTHO05D007485 1.8e-18 95.5 67 64.2
TAR374G1545 Trochodendron aralioides HOM05D005501 ORTHO05D007485 1.8e-18 95.5 67 64.2
Oeu055503.2 Olea europaea HOM05D005501 ORTHO05D007485 2.3e-18 95.1 67 64.2
Lalb_Chr07g0189951 Lupinus albus HOM05D005501 ORTHO05D007485 3.0e-18 94.7 67 64.2
MD02G1206900 Malus domestica HOM05D005501 ORTHO05D007485 3.0e-18 94.7 67 67.2
arahy.Tifrunner.gnm1.ann1.J20DWG Arachis hypogaea HOM05D005501 ORTHO05D007485 3.9e-18 94.4 67 62.7
arahy.Tifrunner.gnm1.ann1.M89JWR Arachis hypogaea HOM05D005501 ORTHO05D007485 3.9e-18 94.4 67 62.7
unitig_37.g12896 Utricularia gibba HOM05D005501 ORTHO05D007485 3.9e-18 94.4 67 62.7
Actinidia12246 Actinidia chinensis HOM05D005501 ORTHO05D007485 5.1e-18 94.0 67 64.2
Ah.05g176650 Amaranthus hybridus HOM05D005501 ORTHO05D007485 5.1e-18 94.0 67 65.7
AUR62004192 Chenopodium quinoa HOM05D005501 ORTHO05D007485 5.1e-18 94.0 67 64.2
AUR62013652 Chenopodium quinoa HOM05D005501 ORTHO05D007485 5.1e-18 94.0 67 64.2
Sed0021448 Sechium edule HOM05D005501 ORTHO05D007485 5.1e-18 94.0 69 66.7
Ciclev10021173m.g Citrus clementina HOM05D005501 ORTHO05D007485 6.7e-18 93.6 67 64.2
Cc02_g24090 Coffea canephora HOM05D005501 ORTHO05D007485 6.7e-18 93.6 67 62.7
Duzib133G0079 Durio zibethinus HOM05D005501 ORTHO05D007485 6.7e-18 93.6 67 64.2
Medtr4g024920 Medicago truncatula HOM05D005501 ORTHO05D007485 6.7e-18 93.6 67 62.7
THA.LOC104817237 Tarenaya hassleriana HOM05D005501 ORTHO05D007485 6.7e-18 93.6 67 65.7
CAN.G295.11 Capsicum annuum HOM05D005501 ORTHO05D007485 8.7e-18 93.2 67 64.2
Cpa.g.sc18.102 Carica papaya HOM05D005501 ORTHO05D007485 8.7e-18 93.2 67 62.7
Lsat_1_v5_gn_4_43120 Lactuca sativa HOM05D005501 ORTHO05D007485 8.7e-18 93.2 67 62.7
Eucgr.E01449 Eucalyptus grandis HOM05D005501 ORTHO05D007485 1.1e-17 92.8 69 65.2
FvH4_7g11490 Fragaria vesca HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
FAN03G0203 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
FAN06G2192 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
FAN06G3216 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
FAN10G2689 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
FAN10G2758 Fragaria x ananassa HOM05D005501 ORTHO05D007485 1.1e-17 92.8 67 64.2
EL10Ac1g00871 Beta vulgaris HOM05D005501 ORTHO05D007485 1.5e-17 92.4 67 64.2
SGA_v2.0_scaffold95G28910 Striga asiatica HOM05D005501 ORTHO05D007485 1.5e-17 92.4 67 61.2
HPP92_000383 Vanilla planifolia HOM05D005501 ORTHO05D007485 1.9e-17 92.0 67 64.2
Lj7C531T10 Lonicera japonica HOM05D005501 ORTHO05D007485 2.5e-17 91.7 67 65.7
TAR375G0004 Trochodendron aralioides HOM05D005501 ORTHO05D007485 2.5e-17 91.7 67 62.7
Aqoxy7G00665 Aquilegia oxysepala HOM05D005501 ORTHO05D007485 3.3e-17 91.3 67 64.2
CDE11G1124 Ceratophyllum demersum HOM05D005501 ORTHO05D007485 3.3e-17 91.3 67 61.2
RcHm_v2.0_Chr1g0349931 Rosa chinensis HOM05D005501 ORTHO05D007485 3.3e-17 91.3 67 62.7
ATR0757G194 Amborella trichopoda HOM05D005501 ORTHO05D007485 4.3e-17 90.9 67 64.2
FAN01G2666 Fragaria x ananassa HOM05D005501 ORTHO05D007485 4.3e-17 90.9 67 62.7
HanXRQChr16g0519981 Helianthus annuus HOM05D005501 ORTHO05D007485 4.3e-17 90.9 67 61.2
AUR62025959 Chenopodium quinoa HOM05D005501 ORTHO05D007485 7.4e-17 90.1 67 62.7
arahy.Tifrunner.gnm1.ann1.4QW6M0 Arachis hypogaea HOM05D005501 ORTHO05D007485 1.6e-16 89.0 67 61.2
Gohir.A08G135800 Gossypium hirsutum HOM05D005501 ORTHO05D007485 2.2e-16 88.6 67 59.7
PSO478G3019 Papaver somniferum HOM05D005501 ORTHO05D007485 9.0e-15 83.2 67 56.7
BolC4t22245H Brassica oleracea HOM05D005501 ORTHO05D033049 1.5e-14 82.4 45 84.4
Manes.01G266900 Manihot esculenta HOM05D005501 ORTHO05D007485 4.5e-14 80.9 67 56.7
PSO782G1940 Papaver somniferum HOM05D005501 ORTHO05D007485 7.7e-14 80.1 67 55.2
ECA234G2802 Erigeron canadensis HOM05D003566 ORTHO05D007485 7.2e-12 73.6 59 52.5
BcaC02g12229 Brassica carinata HOM05D001546 ORTHO05D008648 7.9e-11 70.1 32 90.6
A05p05300 Brassica napus HOM05D001546 ORTHO05D008648 1.0e-10 69.7 53 64.2
BraA05t19499Z Brassica rapa HOM05D001546 ORTHO05D008648 1.0e-10 69.7 53 64.2
AagrBONN_evm.TU.Sc2ySwM_117.1161 Anthoceros agrestis HOM05D005501 ORTHO05D007485 1.8e-10 68.9 67 49.3
COL.COLO4_12526 Corchorus olitorius HOM05D005501 ORTHO05D007485 3.3e-09 64.7 52 55.8
Mapoly0019s0039 Marchantia polymorpha HOM05D005501 ORTHO05D007485 2.2e-08 62.0 67 47.8
VMungo0331G1483 Vigna mungo HOM05D005501 ORTHO05D007485 5.3e-07 57.4 28 71.4


User provided reference genes

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