Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p34460 Brassica napus HOM05D003906 ORTHO05D004776 8.4e-160 567.0 294 100.0
BolC3t15755H Brassica oleracea HOM05D003906 ORTHO05D004776 7.4e-132 474.2 283 89.4
A03p28510 Brassica napus HOM05D003906 ORTHO05D004776 7.2e-127 457.6 289 84.8
BcaC01g04724 Brassica carinata HOM05D003906 ORTHO05D004776 2.7e-110 402.5 303 75.9
BcaB01g02795 Brassica carinata HOM05D003906 ORTHO05D004776 2.0e-108 396.4 289 74.0
AT1G35470 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 3.3e-39 166.4 228 43.9
Thhalv10001818m.g Eutrema salsugineum HOM05D003906 ORTHO05D004776 7.4e-39 165.2 229 43.2
BolC5t32471H Brassica oleracea HOM05D003906 ORTHO05D004776 1.3e-38 164.5 230 43.0
AL6G42970 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 2.1e-38 163.7 228 44.3
Atru.chr2.1825 Acer truncatum HOM05D003906 ORTHO05D004776 2.8e-38 163.3 227 42.3
CiPaw.08G001800 Carya illinoinensis HOM05D003906 ORTHO05D004776 2.8e-38 163.3 236 40.7
Ciclev10001078m.g Citrus clementina HOM05D003906 ORTHO05D004776 2.8e-38 163.3 225 43.1
Gorai.006G130100 Gossypium raimondii HOM05D003906 ORTHO05D004776 4.8e-38 162.5 229 43.2
AL1G50340 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 8.2e-38 161.8 256 39.8
A09p31780 Brassica napus HOM05D003906 ORTHO05D004776 8.2e-38 161.8 235 42.1
BraA09t38715Z Brassica rapa HOM05D003906 ORTHO05D004776 8.2e-38 161.8 235 42.1
Gohir.D09G112300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 8.2e-38 161.8 229 42.8
AT4G09200 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.1e-37 161.4 232 45.3
AT4G09250 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.1e-37 161.4 232 45.3
AT4G09310 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.1e-37 161.4 232 45.3
BcaC08g43739 Brassica carinata HOM05D003906 ORTHO05D004776 1.1e-37 161.4 235 42.1
BolC6t36252H Brassica oleracea HOM05D003906 ORTHO05D004776 1.1e-37 161.4 235 42.1
Carub.0001s3308 Capsella rubella HOM05D003906 ORTHO05D004776 1.1e-37 161.4 228 42.5
BcaB03g13663 Brassica carinata HOM05D003906 ORTHO05D004776 1.4e-37 161.0 230 41.3
A05p23780 Brassica napus HOM05D003906 ORTHO05D004776 1.4e-37 161.0 228 42.5
BraA05t21248Z Brassica rapa HOM05D003906 ORTHO05D004776 1.4e-37 161.0 228 42.5
Sp1g30230 Schrenkiella parvula HOM05D003906 ORTHO05D004776 1.8e-37 160.6 228 42.1
AT4G09340 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 2.4e-37 160.2 231 44.2
BcaB07g33091 Brassica carinata HOM05D003906 ORTHO05D004776 3.1e-37 159.8 235 42.1
C06p11170 Brassica napus HOM05D003906 ORTHO05D004776 3.1e-37 159.8 235 41.7
MBI06_g32171_MAGBIO Magnolia biondii HOM05D003906 ORTHO05D004776 3.1e-37 159.8 227 42.7
Cfa012932 Carpinus fangiana HOM05D003906 ORTHO05D000991 4.1e-37 159.5 213 43.7
FvH4_5g32270 Fragaria vesca HOM05D003906 ORTHO05D004776 9.0e-37 158.3 226 40.3
CARHR260350 Cardamine hirsuta HOM05D003906 ORTHO05D004776 1.2e-36 157.9 234 42.3
Gohir.A09G115500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 1.2e-36 157.9 231 42.0
Prupe.1G552200 Prunus persica HOM05D003906 ORTHO05D004776 1.2e-36 157.9 237 40.5
BcaC05g27736 Brassica carinata HOM05D003906 ORTHO05D004776 1.5e-36 157.5 228 42.1
C05p37240 Brassica napus HOM05D003906 ORTHO05D004776 1.5e-36 157.5 228 42.1
Gohir.D05G252500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 1.5e-36 157.5 236 40.7
Gorai.009G264700 Gossypium raimondii HOM05D003906 ORTHO05D004776 1.5e-36 157.5 236 40.7
Manes.02G196200 Manihot esculenta HOM05D003906 ORTHO05D004776 1.5e-36 157.5 227 41.9
THA.LOC104816477 Tarenaya hassleriana HOM05D003906 ORTHO05D004776 1.5e-36 157.5 227 41.9
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.0e-36 157.1 253 37.9
CARHR034240 Cardamine hirsuta HOM05D003906 ORTHO05D004776 3.4e-36 156.4 242 39.7
Gohir.A05G251300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 3.4e-36 156.4 236 40.3
Haze_21286 Corylus avellana HOM05D003906 ORTHO05D004776 4.5e-36 156.0 229 42.4
BcaB01g02792 Brassica carinata HOM05D003906 ORTHO05D004776 5.9e-36 155.6 234 41.5
PGR042G0234 Punica granatum HOM05D003906 ORTHO05D004776 7.6e-36 155.2 230 41.7
Aa31LG6G8750 Aethionema arabicum HOM05D003906 ORTHO05D004776 1.3e-35 154.5 234 40.6
FAN18G2269 Fragaria x ananassa HOM05D003906 ORTHO05D004776 1.3e-35 154.5 252 37.3
MD15G1410300 Malus domestica HOM05D003906 ORTHO05D004776 1.3e-35 154.5 270 37.0
TWI59G1118 Tripterygium wilfordii HOM05D003906 ORTHO05D004776 1.3e-35 154.5 230 40.4
Sp6g08200 Schrenkiella parvula HOM05D003906 ORTHO05D004776 1.7e-35 154.1 230 42.2
Aqoxy5G02955 Aquilegia oxysepala HOM05D003906 ORTHO05D004776 2.2e-35 153.7 228 41.2
Medtr4g032800 Medicago truncatula HOM05D003906 ORTHO05D004776 2.9e-35 153.3 253 37.5
SalBow7G1596 Salvia bowleyana HOM05D003906 ORTHO05D004776 2.9e-35 153.3 228 41.7
C03p34490 Brassica napus HOM05D003906 ORTHO05D004776 3.8e-35 152.9 226 42.5
BraA03t12055Z Brassica rapa HOM05D003906 ORTHO05D004776 3.8e-35 152.9 226 42.5
Dinv41741 Davidia involucrata HOM05D003906 ORTHO05D004776 3.8e-35 152.9 236 39.8
Sed0011736 Sechium edule HOM05D003906 ORTHO05D004776 3.8e-35 152.9 226 39.8
Thecc.08G187700 Theobroma cacao HOM05D003906 ORTHO05D004776 3.8e-35 152.9 231 41.6
Phvul.011G000900 Phaseolus vulgaris HOM05D003906 ORTHO05D004776 5.0e-35 152.5 220 40.0
BcaC01g04722 Brassica carinata HOM05D003906 ORTHO05D004776 6.5e-35 152.1 226 42.5
BolC3t15761H Brassica oleracea HOM05D003906 ORTHO05D004776 6.5e-35 152.1 226 42.5
MELO3C022219.2 Cucumis melo HOM05D003906 ORTHO05D004776 6.5e-35 152.1 226 39.8
Duzib177G0129 Durio zibethinus HOM05D003906 ORTHO05D004776 6.5e-35 152.1 231 41.1
QL02p025746 Quercus lobata HOM05D003906 ORTHO05D004776 8.5e-35 151.8 230 38.3
CsaV3_5G040450 Cucumis sativus L. HOM05D003906 ORTHO05D004776 1.1e-34 151.4 226 39.8
Glyma.12G000900 Glycine max HOM05D003906 ORTHO05D004776 1.1e-34 151.4 232 39.2
Hund16785 Selenicereus undatus HOM05D003906 ORTHO05D004776 1.1e-34 151.4 241 39.0
Carub.0006s2784 Capsella rubella HOM05D003906 ORTHO05D004776 1.9e-34 150.6 230 41.7
Dinv04083 Davidia involucrata HOM05D003906 ORTHO05D004776 1.9e-34 150.6 236 39.4
arahy.Tifrunner.gnm1.ann1.AC170Q Arachis hypogaea HOM05D003906 ORTHO05D004776 2.5e-34 150.2 229 38.9
arahy.Tifrunner.gnm1.ann1.NDRV14 Arachis hypogaea HOM05D003906 ORTHO05D004776 2.5e-34 150.2 229 38.9
Eucgr.F02579 Eucalyptus grandis HOM05D003906 ORTHO05D004776 2.5e-34 150.2 226 38.1
Manes.18G104100 Manihot esculenta HOM05D003906 ORTHO05D004776 3.2e-34 149.8 226 40.7
TPR.G34173 Trifolium pratense HOM05D003906 ORTHO05D004776 3.2e-34 149.8 220 39.1
Lsat_1_v5_gn_1_12460 Lactuca sativa HOM05D003906 ORTHO05D004776 4.2e-34 149.4 236 39.4
PSO170G2127 Papaver somniferum HOM05D003906 ORTHO05D004776 4.2e-34 149.4 230 39.1
VMungo1127G1719 Vigna mungo HOM05D003906 ORTHO05D004776 4.2e-34 149.4 220 39.1
CSS0022245 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 5.5e-34 149.1 239 39.7
CSS0049725 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 5.5e-34 149.1 239 39.7
Lj3g0000257 Lotus japonicus HOM05D003906 ORTHO05D004776 5.5e-34 149.1 230 37.8
Actinidia23018 Actinidia chinensis HOM05D003906 ORTHO05D004776 9.3e-34 148.3 226 39.4
PSO017G0948 Papaver somniferum HOM05D003906 ORTHO05D004776 9.3e-34 148.3 230 39.1
HPP92_001193 Vanilla planifolia HOM05D003906 ORTHO05D004776 9.3e-34 148.3 226 39.8
A03p28530 Brassica napus HOM05D003906 ORTHO05D004776 1.2e-33 147.9 226 41.6
Cc10_g10260 Coffea canephora HOM05D003906 ORTHO05D004776 1.2e-33 147.9 227 42.3
ECA247G1339 Erigeron canadensis HOM05D003906 ORTHO05D004776 1.2e-33 147.9 218 40.8
Glyma.08G238500 Glycine max HOM05D003906 ORTHO05D004776 1.6e-33 147.5 220 39.5
Peaxi162Scf00076g00225 Petunia axillaris HOM05D003906 ORTHO05D004776 1.6e-33 147.5 238 39.1
Solyc03g033380.3 Solanum lycopersicum HOM05D003906 ORTHO05D004776 1.6e-33 147.5 227 40.1
Hma1.2p1_0342F.1_g130710 Hydrangea macrophylla HOM05D003906 ORTHO05D004776 2.1e-33 147.1 241 38.6
Nitab4.5_0009321g0030 Nicotiana tabacum HOM05D003906 ORTHO05D004776 2.1e-33 147.1 227 39.6
Rhsim06G0114100 Rhododendron simsii HOM05D003906 ORTHO05D004776 2.1e-33 147.1 240 39.2
Zm00001eb243840 Zea mays HOM05D003906 ORTHO05D004776 3.6e-33 146.4 240 38.3
Nitab4.5_0000130g0080 Nicotiana tabacum HOM05D003906 ORTHO05D004776 4.6e-33 146.0 224 40.2
Sopen03g006150 Solanum pennellii HOM05D003906 ORTHO05D004776 6.1e-33 145.6 228 39.5
TAR628G0992 Trochodendron aralioides HOM05D003906 ORTHO05D004776 6.1e-33 145.6 226 38.5
HanXRQChr04g0109631 Helianthus annuus HOM05D003906 ORTHO05D004776 7.9e-33 145.2 236 37.7
Os02g0556600 Oryza sativa ssp. japonica HOM05D003906 ORTHO05D004776 1.0e-32 144.8 253 36.4
Ca_19699_v3 Cicer arietinum L. HOM05D003906 ORTHO05D004776 1.3e-32 144.4 220 38.2
Psat7g226120 Pisum sativum HOM05D003906 ORTHO05D004776 1.8e-32 144.1 225 37.3
MD08G1220100 Malus domestica HOM05D003906 ORTHO05D004776 3.9e-32 142.9 236 38.6
CDE02G3748 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 6.7e-32 142.1 226 38.1
Ah.05g178390 Amaranthus hybridus HOM05D003906 ORTHO05D004776 8.7e-32 141.7 241 37.8
CAN.G354.51 Capsicum annuum HOM05D003906 ORTHO05D004776 1.5e-31 141.0 227 37.4
unitig_749.g13881 Utricularia gibba HOM05D003906 ORTHO05D004776 1.5e-31 141.0 218 39.0
Zm00001eb182000 Zea mays HOM05D003906 ORTHO05D004776 1.5e-31 141.0 240 37.1
CDE08G1205 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 1.9e-31 140.6 227 37.4
DCAR_001451 Daucus carota HOM05D003906 ORTHO05D004776 4.3e-31 139.4 227 37.9
FAN04G2445 Fragaria x ananassa HOM05D003906 ORTHO05D004776 4.3e-31 139.4 225 36.4
CSS0005180 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 7.4e-31 138.7 200 42.0
RcHm_v2.0_Chr7g0228461 Rosa chinensis HOM05D003906 ORTHO05D004776 7.4e-31 138.7 185 42.2
Potri.013G108400 Populus trichocarpa HOM05D003906 ORTHO05D004776 1.3e-30 137.9 208 40.9
GSVIVG01001786001 Vitis vinifera HOM05D003906 ORTHO05D004776 1.3e-30 137.9 205 42.4
Migut.C01295 Erythranthe guttata HOM05D003906 ORTHO05D004776 1.6e-30 137.5 225 38.2
SGA_v2.0_scaffold24G10576 Striga asiatica HOM05D003906 ORTHO05D004776 2.2e-30 137.1 265 36.6
Lalb_Chr01g0000071 Lupinus albus HOM05D003906 ORTHO05D004776 4.8e-30 136.0 224 36.6
Nn5g27566 Nelumbo nucifera HOM05D003906 ORTHO05D004776 1.1e-29 134.8 182 43.4
EL10Ac1g00112 Beta vulgaris HOM05D003906 ORTHO05D004776 3.1e-29 133.3 244 36.5
Oeu051791.1 Olea europaea HOM05D003906 ORTHO05D004776 3.1e-29 133.3 252 36.9
Oeu064077.1 Olea europaea HOM05D003906 ORTHO05D004776 2.0e-28 130.6 237 37.1
MSTRG.1555 Avicennia marina HOM05D003906 ORTHO05D004776 2.6e-28 130.2 230 38.3
Lj4C483G1 Lonicera japonica HOM05D003906 ORTHO05D004776 3.8e-27 126.3 249 34.9
ATR1136G046 Amborella trichopoda HOM05D003906 ORTHO05D004776 8.5e-27 125.2 237 36.7
Sabra13G0093600 Salix brachista HOM05D003906 ORTHO05D004776 1.4e-26 124.4 177 40.7
FAN13G2487 Fragaria x ananassa HOM05D003906 ORTHO05D004776 5.5e-26 122.5 162 41.4
SMO236G0134 Selaginella moellendorffii HOM05D003906 ORTHO05D004776 5.5e-26 122.5 229 37.1
Sabra19G0091700 Salix brachista HOM05D003906 ORTHO05D004776 1.2e-25 121.3 266 33.5
Mapoly0002s0237 Marchantia polymorpha HOM05D003906 ORTHO05D004776 1.6e-25 120.9 229 35.4
Potri.019G080800 Populus trichocarpa HOM05D003906 ORTHO05D004776 2.3e-24 117.1 141 44.7
Pp3c25_15350 Physcomitrium patens HOM05D003906 ORTHO05D004776 5.1e-24 115.9 247 31.6
Pp3c16_23970 Physcomitrium patens HOM05D003906 ORTHO05D004776 6.7e-24 115.5 240 34.6
COL.COLO4_24795 Corchorus olitorius HOM05D003906 ORTHO05D004776 2.6e-23 113.6 206 36.9
Duzib116G0916 Durio zibethinus HOM05D003906 ORTHO05D004776 2.6e-23 113.6 235 34.5
AUR62023516 Chenopodium quinoa HOM05D003906 ORTHO05D004776 5.7e-23 112.5 227 35.2
SHI26286 Sapria himalayana HOM05D003906 ORTHO05D004776 5.7e-23 112.5 131 46.6
AUR62004621 Chenopodium quinoa HOM05D003906 ORTHO05D004776 2.2e-22 110.5 176 39.2
Sc23g0001390 Simmondsia chinensis HOM05D003906 ORTHO05D004776 2.4e-21 107.1 145 44.8
Cre09.g387801 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 9.1e-21 105.1 202 33.7
vmacro12471 Vaccinium macrocarpon HOM05D003906 ORTHO05D004776 1.3e-19 101.3 129 45.0
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 9.4e-18 95.1 209 33.5
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 2.7e-17 93.6 197 36.0
unitig_32.g11182 Utricularia gibba HOM05D000008 ORTHO05D000005 2.0e-15 87.4 162 34.0
CBR_g30766 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-13 79.0 210 31.9
SEGI_33732 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 9.1e-13 78.6 92 44.6
AagrBONN_evm.TU.Sc2ySwM_362.2414 Anthoceros agrestis HOM05D007564 ORTHO05D009975 1.2e-12 78.2 154 35.7
AagrBONN_evm.TU.Sc2ySwM_228.4865 Anthoceros agrestis HOM05D003906 ORTHO05D011031 1.6e-12 77.8 188 31.4
SEGI_28086 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 1.7e-11 74.3 147 36.7
Cfa023121 Carpinus fangiana HOM05D003906 ORTHO05D004776 1.1e-10 71.6 246 26.0
AagrBONN_evm.TU.Sc2ySwM_369.175 Anthoceros agrestis HOM05D003906 ORTHO05D004776 4.2e-10 69.7 173 31.2
DCAR_028625 Daucus carota HOM05D003906 ORTHO05D004776 2.6e-07 60.5 63 49.2
Cre01.g007150 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 2.8e-06 57.0 188 28.2


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