Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 1.9e-164 582.4 294 100.0
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 1.9e-164 582.4 294 100.0
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 9.6e-164 580.1 294 99.3
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.3e-163 579.7 294 99.0
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 1.8e-162 575.9 294 99.0
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 1.6e-155 552.7 294 93.5
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 6.3e-155 550.8 294 93.5
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 4.1e-154 548.1 294 92.9
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 5.3e-154 547.7 294 92.9
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 5.3e-154 547.7 294 92.9
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 6.9e-154 547.4 294 92.9
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 9.0e-154 547.0 294 92.2
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.2e-153 546.6 294 92.5
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 4.5e-153 544.7 291 94.2
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.4e-151 539.7 294 91.5
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 5.5e-151 537.7 294 90.5
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 6.1e-150 534.3 294 89.5
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 8.7e-149 530.4 294 89.8
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 1.1e-148 530.0 294 90.5
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 1.9e-148 529.3 294 90.1
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 2.5e-148 528.9 294 90.5
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 9.7e-148 526.9 294 88.4
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.3e-147 526.6 294 88.8
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.6e-147 526.2 294 87.8
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 3.7e-147 525.0 294 88.1
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 3.7e-147 525.0 294 88.1
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 3.7e-147 525.0 294 88.1
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 4.8e-147 524.6 294 88.8
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 8.2e-147 523.9 294 87.8
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 8.2e-147 523.9 294 87.8
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 2.4e-146 522.3 294 88.1
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 7.7e-145 517.3 291 87.6
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 3.2e-143 511.9 293 85.7
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 5.5e-143 511.1 289 86.9
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.7e-142 508.8 291 85.6
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 1.1e-140 503.4 291 84.5
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 2.0e-140 502.7 291 84.5
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.5e-140 502.3 291 83.5
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 4.3e-140 501.5 289 85.5
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 5.7e-140 501.1 291 84.2
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 7.4e-140 500.7 289 84.8
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.8e-139 498.8 289 84.8
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 9.1e-138 493.8 289 82.0
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 1.5e-137 493.0 291 83.5
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 3.4e-137 491.9 291 83.8
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 4.5e-137 491.5 289 81.3
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 4.5e-137 491.5 290 82.4
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 7.7e-137 490.7 289 81.3
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 1.0e-136 490.3 294 83.0
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.7e-136 489.6 293 80.5
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.7e-136 489.6 294 83.3
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 1.7e-136 489.6 294 83.3
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 2.9e-136 488.8 294 82.0
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 2.9e-136 488.8 289 81.0
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.9e-135 486.1 289 83.4
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 4.2e-135 485.0 291 82.1
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 7.2e-135 484.2 288 81.9
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 7.2e-135 484.2 291 82.1
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.6e-134 483.0 289 81.3
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 3.6e-134 481.9 288 81.9
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 4.7e-134 481.5 306 79.7
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 6.1e-134 481.1 290 81.0
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.0e-133 480.3 289 80.6
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 1.1e-132 476.9 291 80.4
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 2.0e-132 476.1 289 81.7
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 2.0e-132 476.1 290 80.3
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 2.0e-132 476.1 294 79.6
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 2.6e-132 475.7 289 79.9
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 5.7e-132 474.6 289 79.6
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 9.7e-132 473.8 291 80.4
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.2e-131 472.6 289 78.9
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 3.7e-131 471.9 291 80.8
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 6.3e-131 471.1 289 79.9
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 6.3e-131 471.1 289 79.9
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 79.2
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.1e-130 470.3 289 78.5
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 1.1e-130 470.3 289 78.5
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.1e-130 470.3 289 79.6
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.4e-130 469.9 289 79.6
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.8e-130 469.5 289 78.5
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 4.1e-130 468.4 289 78.5
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 5.3e-130 468.0 294 78.9
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.3e-130 468.0 290 80.7
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 7.0e-130 467.6 289 79.2
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 7.0e-130 467.6 289 80.3
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 7.0e-130 467.6 288 80.6
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 7.0e-130 467.6 293 78.2
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 1.2e-129 466.8 301 76.7
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.2e-129 466.8 290 79.0
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.6e-129 466.5 289 79.2
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.6e-129 466.5 288 80.2
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 2.0e-129 466.1 291 78.0
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 77.2
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 78.9
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 4.5e-129 464.9 289 76.8
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 4.5e-129 464.9 288 80.2
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.7e-128 463.0 289 77.2
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 1.7e-128 463.0 289 78.5
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 2.5e-127 459.1 329 72.9
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 5.5e-127 458.0 292 78.1
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 5.5e-127 458.0 289 77.9
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 7.2e-127 457.6 291 78.0
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 9.4e-127 457.2 288 78.1
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 3.6e-126 455.3 289 76.8
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 6.1e-126 454.5 292 78.8
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.4e-125 453.4 289 76.1
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 1.8e-125 453.0 292 75.3
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 2.3e-125 452.6 288 77.4
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 3.0e-125 452.2 289 76.8
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 5.2e-125 451.4 289 76.1
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.1e-124 450.3 305 74.4
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 2.0e-124 449.5 292 77.4
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 3.3e-124 448.7 301 74.4
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 4.4e-124 448.4 288 76.7
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 5.7e-124 448.0 295 75.6
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 5.7e-124 448.0 287 77.4
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 1.4e-122 443.4 293 76.1
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 4.1e-122 441.8 274 78.8
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 7.0e-122 441.0 294 73.5
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 1.6e-121 439.9 289 75.4
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 1.0e-120 437.2 309 70.9
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 1.0e-120 437.2 291 74.6
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.9e-120 435.6 296 72.6
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 5.0e-120 434.9 296 72.6
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.1e-119 433.7 293 73.4
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 3.6e-118 428.7 260 82.7
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.0e-117 425.6 447 54.1
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 3.4e-116 422.2 300 73.0
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 1.7e-115 419.9 311 70.1
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.8e-114 416.4 291 74.6
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 5.4e-114 414.8 288 71.2
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 9.1e-114 414.1 288 72.6
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 9.4e-111 404.1 255 77.3
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 5.2e-109 398.3 257 76.3
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 6.8e-109 397.9 295 67.1
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 1.5e-108 396.7 231 83.1
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 2.6e-108 396.0 299 67.9
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 6.3e-107 391.3 289 65.4
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 5.9e-105 384.8 234 80.8
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.9e-104 382.5 289 64.0
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 5.0e-104 381.7 289 63.3
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 3.0e-101 372.5 287 62.0
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 8.3e-99 364.4 231 77.5
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 2.0e-97 359.8 297 65.0
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 2.3e-93 346.3 294 57.8
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.4e-85 320.5 269 65.1
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 4.9e-83 312.0 203 76.8
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 6.6e-80 301.6 285 54.7
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 5.6e-79 298.5 287 51.6
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 1.2e-68 264.2 287 47.4
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.5e-68 263.8 285 47.0
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 1.7e-67 260.4 281 46.6
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.7e-65 253.1 163 73.0
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 1.9e-55 220.3 154 66.9
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 4.8e-54 215.7 151 73.5
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 4.0e-53 212.6 113 91.2
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 9.0e-53 211.5 139 79.1
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 1.2e-25 121.3 82 73.2
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 3.3e-23 113.2 78 73.1
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 1.3e-22 111.3 78 73.1
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 6.3e-22 109.0 124 48.4
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.4e-21 107.8 78 71.8
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 7.7e-20 102.1 61 78.7
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 7.7e-20 102.1 75 66.7
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 3.8e-19 99.8 161 39.1
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.9e-18 97.4 52 88.5
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 4.2e-18 96.3 79 65.8
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 3.6e-17 93.2 70 64.3
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.4e-16 91.3 57 75.4
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 3.1e-13 80.1 58 65.5
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 3.1e-13 80.1 58 65.5
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 5.0e-11 72.8 54 68.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 2.6e-07 60.5 59 61.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 4.4e-07 59.7 46 60.9


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