Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 4.7e-163 578.2 378 100.0
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 7.5e-153 544.3 392 84.4
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 6.2e-139 498.0 381 90.6
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 1.7e-136 490.0 393 79.1
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 1.3e-133 480.3 380 89.7
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 1.2e-129 467.2 382 88.2
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 4.2e-111 405.6 388 81.7
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 4.2e-111 405.6 388 81.7
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 5.5e-111 405.2 388 81.7
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 1.8e-109 400.2 388 80.9
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 7.6e-105 384.8 370 81.4
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 7.9e-102 374.8 390 77.9
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.4e-95 354.0 393 75.8
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 5.5e-95 352.1 388 75.8
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 1.3e-91 340.9 391 73.9
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 8.2e-91 338.2 380 72.9
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 1.1e-90 337.8 393 73.3
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 9.1e-82 308.1 384 69.5
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 5.9e-81 305.4 381 68.2
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 4.8e-75 285.8 379 64.9
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 1.8e-74 283.9 394 65.2
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 1.2e-73 281.2 381 65.1
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 1.6e-73 280.8 367 65.7
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 1.6e-73 280.8 384 67.2
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 2.2e-72 276.9 378 64.8
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 5.0e-72 275.8 378 64.8
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.1e-71 274.6 378 64.6
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.1e-71 274.6 401 62.1
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 9.4e-71 271.6 385 65.7
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 2.7e-70 270.0 367 65.9
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 3.6e-70 269.6 378 50.8
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 6.1e-70 268.9 379 50.4
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 6.1e-70 268.9 384 63.3
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 8.0e-70 268.5 378 63.2
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 8.0e-70 268.5 378 64.3
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.0e-69 268.1 374 63.4
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 1.4e-69 267.7 379 64.6
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 1.4e-69 267.7 378 63.2
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 2.3e-69 266.9 378 64.3
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 3.0e-69 266.5 371 64.2
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 3.0e-69 266.5 375 62.7
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 5.2e-69 265.8 378 64.0
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 5.2e-69 265.8 382 63.4
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 5.2e-69 265.8 382 63.6
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 5.2e-69 265.8 372 64.0
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 8.8e-69 265.0 378 64.3
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 8.8e-69 265.0 378 62.7
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 2.0e-68 263.8 370 64.3
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 2.0e-68 263.8 383 56.9
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 4.4e-68 262.7 361 64.3
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 7.5e-68 261.9 378 63.8
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.3e-67 261.2 378 63.0
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 2.2e-67 260.4 373 64.6
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 2.8e-67 260.0 367 62.9
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 2.8e-67 260.0 389 62.5
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 8.2e-67 258.5 382 62.3
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 8.2e-67 258.5 382 62.3
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 1.8e-66 257.3 383 63.2
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 2.4e-66 256.9 380 60.8
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 1.2e-65 254.6 368 62.8
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 1.2e-65 254.6 357 63.9
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 1.2e-65 254.6 368 62.2
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 2.0e-65 253.8 389 61.7
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 2.7e-65 253.4 376 60.4
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.0e-64 251.5 378 62.4
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 1.3e-64 251.1 370 61.4
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.9e-64 250.0 406 49.0
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 3.8e-64 249.6 368 54.6
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 3.8e-64 249.6 350 64.9
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.9e-63 247.3 377 62.3
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 2.5e-63 246.9 380 61.3
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 3.2e-63 246.5 382 60.7
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 4.2e-63 246.1 363 62.3
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 1.2e-62 244.6 364 62.6
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 4.7e-62 242.7 365 62.5
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 6.1e-62 242.3 368 62.2
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 8.0e-62 241.9 384 61.2
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 8.0e-62 241.9 369 61.5
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 3.0e-61 240.0 364 62.1
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 3.0e-61 240.0 368 61.4
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 2.0e-60 237.3 372 59.9
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 2.2e-59 233.8 379 52.8
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 3.1e-58 229.9 389 58.9
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 4.1e-58 229.6 337 62.9
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 4.1e-58 229.6 388 59.3
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 4.1e-58 229.6 363 60.3
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 1.3e-56 224.6 366 62.3
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 1.9e-55 220.7 362 58.8
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 2.5e-55 220.3 362 63.8
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 4.2e-55 219.5 341 63.3
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 4.2e-55 219.5 384 59.1
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 8.0e-54 215.3 353 62.9
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 8.0e-54 215.3 351 59.5
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 8.0e-54 215.3 356 61.0
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 1.8e-53 214.2 351 59.5
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 4.0e-53 213.0 367 58.9
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 2.0e-52 210.7 391 55.0
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 2.0e-52 210.7 348 60.1
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 1.3e-51 208.0 348 60.3
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.3e-51 208.0 500 34.8
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 5.4e-50 202.6 361 35.7
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 9.2e-50 201.8 333 53.5
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 5.9e-49 199.1 360 56.9
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 6.6e-48 195.7 251 72.5
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 1.2e-44 184.9 311 64.0
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.4e-42 177.9 308 63.3
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 1.0e-40 171.8 277 60.3
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 1.3e-40 171.4 312 60.3
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 3.3e-39 166.8 352 53.7
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 3.6e-38 163.3 322 60.9
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 4.7e-38 162.9 307 61.9
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.5e-36 157.9 342 55.6
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 3.4e-36 156.8 310 58.7
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 5.8e-36 156.0 314 58.0
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.6e-33 147.9 135 71.9
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 1.6e-33 147.9 371 50.1
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 4.6e-33 146.4 366 50.3
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 7.8e-33 145.6 128 71.1
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 7.8e-33 145.6 309 56.3
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 1.3e-32 144.8 170 50.0
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 8.6e-32 142.1 180 52.2
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 4.3e-31 139.8 133 67.7
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 8.1e-30 135.6 174 50.6
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 1.1e-26 125.2 181 46.4
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 2.4e-26 124.0 353 51.3
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 7.3e-23 112.5 237 59.9
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 1.2e-22 111.7 115 62.6
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 4.4e-20 103.2 245 57.1
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.7e-19 101.3 134 55.2
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 7.8e-17 92.4 233 53.2
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 7.3e-15 85.9 87 56.3
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 1.8e-13 81.3 385 42.6
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 7.6e-12 75.9 145 36.6
arahy.Tifrunner.gnm1.ann1.VA1YNF Arachis hypogaea HOM05D005383 ORTHO05D006722 1.2e-09 68.6 88 64.8
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 3.0e-08 63.9 34 76.5
arahy.Tifrunner.gnm1.ann1.L3LYUI Arachis hypogaea HOM05D005383 ORTHO05D031493 1.5e-07 61.6 61 50.8
arahy.Tifrunner.gnm1.ann1.XX0GIY Arachis hypogaea HOM05D005383 ORTHO05D006722 1.5e-07 61.6 34 73.5


User provided reference genes

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