Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p08720 Brassica napus HOM05D003829 ORTHO05D004943 3.8e-63 244.6 117 100.0
BolC3t13370H Brassica oleracea HOM05D000168 ORTHO05D000811 8.5e-63 243.4 117 99.1
BraA03t10079Z Brassica rapa HOM05D000168 ORTHO05D000811 2.4e-57 225.3 120 90.0
A03p07510 Brassica napus HOM05D003829 ORTHO05D004943 4.1e-57 224.6 120 90.8
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 2.6e-51 205.3 120 81.7
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 2.6e-51 205.3 120 81.7
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 2.6e-51 205.3 120 81.7
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 2.6e-51 205.3 120 81.7
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 5.7e-51 204.1 120 80.8
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 9.7e-51 203.4 120 80.0
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 1.1e-49 199.9 120 77.5
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 5.3e-49 197.6 120 76.7
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 2.7e-48 195.3 120 76.7
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 5.9e-48 194.1 124 76.6
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 7.7e-48 193.7 119 75.6
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 1.0e-47 193.4 120 75.0
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.0e-47 193.4 119 75.6
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 2.9e-47 191.8 131 72.5
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 3.8e-47 191.4 120 74.2
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 5.0e-47 191.0 120 75.8
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.1e-46 189.9 120 73.3
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.1e-46 189.9 120 73.3
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.5e-46 189.5 127 72.4
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 1.5e-46 189.5 120 73.3
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.9e-46 189.1 120 74.2
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 1.9e-46 189.1 120 75.0
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 4.2e-46 188.0 120 75.8
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.2e-46 188.0 120 72.5
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 7.2e-46 187.2 120 72.5
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 7.2e-46 187.2 120 75.8
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 1.2e-45 186.4 120 74.2
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 4.7e-45 184.5 120 71.7
Oeu029991.1 Olea europaea HOM05D003829 ORTHO05D004943 4.7e-45 184.5 116 75.0
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 6.1e-45 184.1 119 69.7
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 8.0e-45 183.7 120 73.3
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 1.0e-44 183.3 120 74.2
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 1.0e-44 183.3 120 71.7
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 1.4e-44 183.0 120 70.8
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 1.4e-44 183.0 120 69.2
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 1.4e-44 183.0 120 68.3
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 2.3e-44 182.2 120 70.0
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 2.3e-44 182.2 120 73.3
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 4.0e-44 181.4 119 71.4
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 5.2e-44 181.0 120 73.3
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 5.2e-44 181.0 120 71.7
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 5.2e-44 181.0 120 72.5
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 5.2e-44 181.0 120 70.0
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 6.8e-44 180.6 120 70.0
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 8.8e-44 180.3 120 69.2
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 1.2e-43 179.9 120 69.2
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.2e-43 179.9 120 69.2
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.2e-43 179.9 120 71.7
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.2e-43 179.9 120 71.7
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 1.2e-43 179.9 120 71.7
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 1.5e-43 179.5 120 68.3
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 2.0e-43 179.1 120 70.8
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 2.0e-43 179.1 120 68.3
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.6e-43 178.7 120 69.2
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 4.4e-43 177.9 120 65.0
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 7.5e-43 177.2 120 70.0
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 7.5e-43 177.2 120 69.2
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 9.8e-43 176.8 120 67.5
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 9.8e-43 176.8 120 67.5
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 9.8e-43 176.8 120 62.5
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 9.8e-43 176.8 120 68.3
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 1.3e-42 176.4 120 66.7
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 1.3e-42 176.4 119 66.4
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 1.7e-42 176.0 120 68.3
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 2.2e-42 175.6 120 65.8
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 3.7e-42 174.9 120 65.8
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 3.7e-42 174.9 120 70.8
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 3.7e-42 174.9 120 67.5
C02p08100 Brassica napus HOM05D003829 ORTHO05D004943 6.3e-42 174.1 105 78.1
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 1.8e-41 172.6 120 61.7
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 3.1e-41 171.8 120 66.7
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 3.1e-41 171.8 120 68.3
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.1e-41 171.8 120 69.2
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.1e-41 171.8 120 69.2
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 4.1e-41 171.4 120 64.2
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 7.0e-41 170.6 120 67.5
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 1.2e-40 169.9 120 66.7
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 2.7e-40 168.7 120 66.7
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.7e-40 168.7 117 66.7
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 4.5e-40 167.9 120 63.3
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 5.9e-40 167.5 119 65.5
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 7.7e-40 167.2 111 71.2
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 7.7e-40 167.2 120 64.2
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 1.3e-39 166.4 120 64.2
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 2.9e-39 165.2 120 63.3
SEGI_39885 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.9e-39 165.2 120 65.0
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 6.6e-39 164.1 120 63.3
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 6.6e-39 164.1 161 52.2
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 6.6e-39 164.1 162 51.2
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 1.1e-38 163.3 120 62.5
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 3.3e-38 161.8 146 58.2
SEGI_27435 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 7.2e-38 160.6 120 63.3
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 7.2e-38 160.6 133 59.4
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 6.1e-37 157.5 120 61.7
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 1.0e-36 156.8 119 62.2
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 8.9e-36 153.7 120 59.2
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.2e-35 153.3 120 60.8
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 3.4e-35 151.8 120 60.8
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 4.4e-35 151.4 98 71.4
BolC2t06732H Brassica oleracea HOM05D003829 ORTHO05D004943 7.5e-35 150.6 106 67.9
BcaC03g18463 Brassica carinata HOM05D003829 ORTHO05D004943 9.8e-35 150.2 111 64.9
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 2.2e-34 149.1 99 69.7
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.4e-33 145.6 120 56.7
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.4e-33 144.4 110 60.0
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 5.4e-33 144.4 97 70.1
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 7.0e-33 144.1 219 38.8
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 2.7e-32 142.1 120 56.7
Atru.chr11.247 Acer truncatum HOM05D003829 ORTHO05D004943 3.5e-32 141.7 97 74.2
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 3.5e-32 141.7 128 53.9
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 7.8e-32 140.6 97 66.0
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 1.3e-31 139.8 127 53.5
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 8.6e-31 137.1 125 52.0
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 2.5e-30 135.6 99 60.6
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 5.6e-30 134.4 121 53.7
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 5.6e-30 134.4 118 51.7
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 7.3e-30 134.0 125 54.4
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 1.4e-28 129.8 97 63.9
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 2.6e-27 125.6 117 49.6
HPP92_013143 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-27 125.2 117 53.8
HPP92_013183 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.4e-27 125.2 117 53.8
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 4.4e-27 124.8 130 48.5
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 4.4e-27 124.8 117 53.0
Nitab4.5_0001328g0030 Nicotiana tabacum HOM05D003829 ORTHO05D004943 7.5e-27 124.0 116 54.3
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 1.7e-26 122.9 127 51.2
Nitab4.5_0000069g0100 Nicotiana tabacum HOM05D003829 ORTHO05D004943 2.2e-26 122.5 115 53.9
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 4.9e-26 121.3 117 53.8
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 6.4e-26 120.9 118 50.8
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 8.3e-26 120.6 115 48.7
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.4e-25 119.0 117 52.1
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 4.1e-25 118.2 118 48.3
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 1.0e-23 113.6 121 45.5
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 1.4e-20 103.2 126 42.9
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.5e-19 99.8 99 51.5
MELO3C000039.2 Cucumis melo HOM05D003829 ORTHO05D004943 1.3e-18 96.7 75 61.3
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 1.7e-15 86.3 63 65.1
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 1.9e-14 82.8 118 38.1
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.2e-11 73.6 117 40.2
HPP92_012679 Vanilla planifolia HOM05D000282 ORTHO05D004791 1.7e-10 69.7 96 43.8
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 6.4e-10 67.8 37 81.1
HanXRQChr05g0129701 Helianthus annuus HOM05D003829 ORTHO05D044979 3.2e-09 65.5 38 76.3
Haze_25315 Corylus avellana HOM05D003829 ORTHO05D004943 4.1e-09 65.1 60 50.0
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 7.1e-09 64.3 38 73.7
HPP92_013186 Vanilla planifolia HOM05D003829 ORTHO05D004943 3.3e-06 55.5 42 64.3
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 4.3e-06 55.1 38 63.2
TAR374G1547 Trochodendron aralioides HOM05D003829 ORTHO05D004943 5.6e-06 54.7 32 71.9


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