Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 0.0e+00 1147.9 591 100.0
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 0.0e+00 1144.0 591 99.5
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 0.0e+00 1137.5 591 99.3
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 0.0e+00 1106.7 595 96.6
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 0.0e+00 1106.3 595 96.6
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 0.0e+00 1078.9 591 94.8
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 6.6e-305 1050.0 595 92.6
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 5.2e-294 1013.8 592 89.5
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 7.8e-290 1000.0 590 89.0
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.3e-289 998.4 564 91.8
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 2.2e-284 981.9 552 92.6
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 7.4e-272 940.3 600 82.3
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.8e-265 919.1 595 78.8
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 2.0e-261 905.6 589 78.3
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 4.3e-248 861.3 611 72.8
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 3.2e-243 845.1 601 71.2
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 4.4e-240 834.7 604 69.9
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 2.8e-239 832.0 603 70.1
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 4.8e-239 831.2 600 70.5
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.4e-238 828.9 601 69.6
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 4.1e-238 828.2 594 68.7
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 5.9e-237 824.3 599 69.4
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 7.7e-237 823.9 598 70.4
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 2.2e-236 822.4 598 69.7
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 6.5e-236 820.8 597 69.7
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 8.5e-236 820.5 600 69.5
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.1e-235 820.1 597 69.5
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 1.1e-235 820.1 597 69.2
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 3.2e-235 818.5 613 69.0
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 4.2e-235 818.1 595 69.2
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 8.0e-234 813.9 623 68.5
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 1.0e-233 813.5 602 70.3
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 2.3e-233 812.4 600 68.3
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 8.8e-233 810.4 602 69.8
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.3e-231 806.6 591 70.6
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 2.4e-230 802.4 598 69.1
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 2.4e-230 802.4 583 69.8
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 2.4e-230 802.4 598 68.7
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.1e-230 802.0 594 67.8
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 4.1e-230 801.6 597 68.0
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 7.0e-230 800.8 600 67.5
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.6e-229 799.7 602 68.8
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.6e-229 798.9 592 68.2
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 3.5e-229 798.5 600 69.7
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 5.9e-229 797.7 592 68.2
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.0e-228 797.0 595 68.6
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.7e-228 796.2 592 68.1
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 3.8e-228 795.0 637 65.6
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 5.0e-228 794.7 597 68.3
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 3.2e-227 792.0 602 67.4
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 4.2e-227 791.6 591 68.0
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 2.1e-226 789.3 591 68.4
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.7e-226 788.9 591 67.3
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 1.4e-225 786.6 592 66.4
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.8e-225 786.2 602 67.3
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 5.7e-224 781.2 598 67.7
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 2.2e-223 779.2 597 67.3
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 6.3e-223 777.7 592 65.5
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 1.4e-222 776.5 592 67.2
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.6e-221 773.1 599 66.9
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.0e-221 772.7 592 65.5
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 3.5e-221 771.9 612 64.9
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 2.2e-220 769.2 599 65.8
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 5.0e-220 768.1 601 66.1
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 8.5e-220 767.3 592 66.4
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.9e-219 766.1 599 63.3
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 9.4e-219 763.8 598 64.9
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 1.2e-218 763.5 602 65.6
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.3e-217 759.2 594 66.2
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 2.6e-216 755.7 599 64.6
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 3.7e-215 751.9 595 64.2
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 6.3e-215 751.1 582 65.8
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.8e-214 749.6 601 62.7
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 5.4e-214 748.0 598 63.7
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 7.0e-214 747.7 605 63.8
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 1.2e-213 746.9 605 63.6
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 8.6e-212 740.7 590 63.7
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 8.6e-212 740.7 590 64.2
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 5.5e-211 738.0 595 63.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 3.6e-210 735.3 601 62.2
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 3.6e-210 735.3 601 63.4
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 4.7e-210 734.9 592 64.0
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 2.6e-208 729.2 582 63.9
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 2.6e-208 729.2 600 63.5
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 7.5e-208 727.6 611 63.3
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 1.3e-207 726.9 536 68.5
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 7.8e-205 717.6 602 61.8
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 2.9e-204 715.7 601 61.4
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.0e-204 714.9 597 64.0
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 1.1e-203 713.8 597 63.7
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.1e-203 713.8 597 63.7
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 1.1e-203 713.8 588 61.7
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.1e-203 713.8 593 62.2
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.3e-203 712.2 592 61.0
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 4.3e-203 711.8 597 63.5
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 2.8e-202 709.1 611 61.7
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 4.0e-201 705.3 600 61.3
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.0e-201 705.3 594 62.8
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 1.5e-200 703.4 605 60.2
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 4.4e-200 701.8 595 61.3
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 9.8e-200 700.7 548 64.8
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.3e-199 700.3 597 62.8
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 2.2e-199 699.5 616 58.9
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 3.7e-199 698.7 608 59.5
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 8.3e-199 697.6 607 61.1
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.2e-197 693.7 590 62.0
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 6.6e-196 688.0 603 61.0
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 2.5e-195 686.0 603 60.9
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.6e-194 683.3 602 59.6
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 2.3e-193 679.5 518 67.6
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 4.6e-189 665.2 574 58.9
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 6.6e-188 661.4 586 59.6
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 8.6e-188 661.0 589 59.3
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 2.6e-184 649.4 598 58.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.7e-183 645.6 592 57.4
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 5.6e-179 631.7 599 56.8
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 7.1e-174 614.8 596 57.2
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 2.3e-172 609.8 599 55.1
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 8.1e-170 601.3 593 54.0
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 5.3e-169 598.6 591 56.5
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 5.8e-168 595.1 601 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.7e-164 583.6 614 52.9
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 7.9e-157 558.1 464 63.4
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 6.2e-154 548.5 601 50.6
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 7.1e-150 535.0 437 63.2
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 3.3e-139 499.6 726 42.7
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 5.7e-131 472.2 394 65.5
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 3.7e-122 443.0 454 49.1
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 1.4e-121 441.0 748 37.8
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 3.5e-120 436.4 500 50.6
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.8e-116 424.1 317 70.0
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 4.0e-116 422.9 315 67.0
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 2.0e-112 410.6 225 95.1
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 2.3e-108 397.1 600 40.3
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.0e-108 396.4 358 59.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-97 361.7 354 58.2
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 4.0e-84 316.6 445 41.1
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 7.5e-83 312.4 266 62.4
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 6.4e-74 282.7 593 35.4
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 2.2e-66 257.7 199 66.8
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 4.1e-65 253.4 183 69.9
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 4.9e-58 229.9 162 71.0
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.4e-52 211.1 136 68.4
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 2.7e-48 197.6 374 37.7
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.6e-45 187.2 119 73.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.3e-39 168.7 228 48.7
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.3e-39 167.9 113 69.9
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.0e-39 167.5 113 69.9
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 1.9e-38 164.9 120 65.8
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.5e-30 137.9 173 49.7
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.7e-30 136.7 99 66.7
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.7e-30 136.7 99 66.7
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 2.8e-29 134.4 125 60.8
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 7.6e-27 126.3 80 73.8
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 5.0e-26 123.6 79 74.7
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 1.5e-22 112.1 180 40.6
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 2.5e-22 111.3 82 64.6
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 1.1e-20 105.9 133 49.6
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.2e-16 92.4 65 61.5
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 6.1e-16 90.1 121 48.8
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 6.3e-13 80.1 70 52.9
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 3.1e-12 77.8 56 58.9
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 2.5e-09 68.2 144 36.1
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 8.8e-07 59.7 41 68.3
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 1.5e-06 58.9 35 80.0
Sc03g0007490 Simmondsia chinensis HOM05D004159 ORTHO05D388831 3.3e-06 57.8 93 40.9
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 5.7e-06 57.0 277 27.8


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