Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 0.0e+00 1404.0 697 100.0
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 0.0e+00 1375.1 696 97.8
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 0.0e+00 1370.1 696 97.6
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 0.0e+00 1364.4 689 98.7
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 0.0e+00 1347.0 689 98.1
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 0.0e+00 1310.4 702 93.3
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 0.0e+00 1279.2 701 91.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 0.0e+00 1268.1 702 90.9
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 0.0e+00 1259.6 702 90.5
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 0.0e+00 1253.4 702 89.9
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 0.0e+00 1179.9 708 83.8
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 0.0e+00 1133.2 714 79.3
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 0.0e+00 1109.0 667 83.7
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 1.1e-301 1039.6 706 73.2
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 1.7e-299 1032.3 706 72.1
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.9e-299 1030.8 706 72.1
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 3.2e-298 1028.1 705 72.5
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 1.2e-297 1026.2 706 71.7
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 4.6e-297 1024.2 707 72.6
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.6e-297 1024.2 697 72.2
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 7.8e-297 1023.5 705 71.6
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.7e-296 1022.3 706 71.5
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 1.7e-296 1022.3 707 71.9
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 3.9e-296 1021.1 706 71.4
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.5e-295 1019.2 706 71.4
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.5e-295 1018.5 701 71.9
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 5.6e-295 1017.3 710 71.1
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 9.5e-295 1016.5 698 71.9
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 2.8e-294 1015.0 708 71.3
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 8.1e-294 1013.4 716 71.4
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 1.1e-293 1013.1 708 71.6
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 1.1e-293 1013.1 708 72.0
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 3.1e-293 1011.5 693 71.6
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 3.1e-293 1011.5 716 71.1
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.2e-292 1009.6 706 70.7
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 2.0e-292 1008.8 705 71.1
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.4e-292 1007.7 711 69.8
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 4.4e-292 1007.7 708 70.6
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 7.6e-292 1006.9 718 70.6
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 6.4e-291 1003.8 684 71.8
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 6.4e-291 1003.8 697 70.4
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 6.4e-291 1003.8 709 70.1
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 8.4e-291 1003.4 708 71.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 1.9e-290 1002.3 694 70.5
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 2.4e-290 1001.9 705 70.2
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 3.2e-290 1001.5 701 71.0
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 2.7e-289 998.4 708 69.8
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 3.5e-289 998.0 701 70.6
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 6.0e-289 997.3 696 70.7
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 7.8e-289 996.9 700 71.0
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 1.0e-288 996.5 698 71.1
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.7e-288 995.7 708 70.2
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 1.7e-288 995.7 697 70.9
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 8.6e-288 993.4 706 69.0
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 4.3e-287 991.1 699 69.4
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 7.3e-287 990.3 690 70.6
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 7.3e-287 990.3 698 69.6
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 2.1e-286 988.8 696 70.0
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.7e-286 987.6 706 70.5
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.4e-285 986.1 697 70.4
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 4.0e-285 984.6 701 69.8
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 5.8e-284 980.7 704 69.3
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 9.9e-284 979.9 778 64.0
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 9.9e-284 979.9 702 69.2
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 2.4e-282 975.3 702 69.1
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 4.2e-282 974.5 716 67.9
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 7.1e-282 973.8 699 69.5
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 2.1e-281 972.2 701 69.3
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 6.0e-281 970.7 716 67.9
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 5.1e-280 967.6 701 69.2
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.3e-278 963.0 701 68.3
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 4.8e-278 961.1 736 66.3
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 3.1e-277 958.4 731 65.4
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 9.0e-277 956.8 708 68.2
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 1.5e-276 956.1 702 68.2
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 9.9e-276 953.4 718 67.0
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 3.2e-274 948.3 703 67.7
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 2.1e-273 945.7 681 68.0
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 6.6e-272 940.6 733 65.9
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 9.6e-271 936.8 659 70.1
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 8.1e-270 933.7 706 66.7
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 1.1e-269 933.3 699 67.1
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 4.9e-267 924.5 774 61.4
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 3.5e-265 918.3 762 62.5
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 2.5e-263 912.1 706 66.0
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 4.3e-263 911.4 700 65.9
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.1e-261 906.7 690 64.2
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 2.5e-255 885.6 697 65.1
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 5.9e-252 874.4 707 63.1
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.0e-251 873.6 703 62.2
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 2.3e-248 862.4 591 71.7
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 1.1e-245 853.6 584 72.6
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.3e-243 846.7 713 59.6
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 2.1e-233 812.8 706 60.8
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 3.9e-232 808.5 553 70.9
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 3.5e-228 795.4 713 58.8
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 1.2e-220 770.4 549 69.0
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 1.2e-209 733.8 518 70.5
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 2.0e-207 726.5 685 54.0
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 7.5e-207 724.5 689 53.0
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 5.9e-196 688.3 688 51.9
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 3.4e-183 646.0 728 51.6
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 4.9e-182 642.1 874 42.1
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 1.3e-174 617.5 440 69.3
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 8.9e-168 594.7 838 41.4
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 3.5e-164 582.8 682 48.2
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 3.5e-156 556.2 498 56.2
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 3.1e-152 543.1 372 71.0
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 2.2e-150 537.0 739 43.6
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 1.7e-142 510.8 735 41.8
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.6e-132 476.5 747 40.3
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 3.0e-131 473.4 717 38.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 6.5e-126 455.7 815 36.4
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.4e-106 389.8 305 66.6
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 6.3e-105 386.0 355 55.8
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 8.5e-102 375.6 328 61.3
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 6.8e-75 286.2 313 51.4
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 3.4e-74 283.9 201 69.7
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 4.3e-61 240.4 185 67.6
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.6e-58 231.1 168 67.9
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 4.0e-51 207.2 132 74.2
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 4.6e-39 167.2 102 79.4
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 4.0e-35 154.1 196 47.4
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 1.1e-32 146.0 113 65.5
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 1.2e-31 142.5 121 57.0
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 2.8e-28 131.3 94 67.0
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 4.2e-24 117.5 99 65.7
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 4.8e-20 104.0 96 57.3
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 1.8e-19 102.1 81 64.2
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 1.5e-18 99.0 67 70.1
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 8.5e-17 93.2 57 78.9
A06p46270 Brassica napus HOM05D005873 ORTHO05D042378 2.3e-14 85.1 78 53.8
Oeu041773.1 Olea europaea HOM05D005873 ORTHO05D042378 4.8e-12 77.4 69 59.4
Cpa.g.c47463 Carica papaya HOM05D005873 ORTHO05D007582 1.7e-09 68.9 37 86.5


User provided reference genes

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