Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p39220 Brassica napus HOM05D022133 ORTHO05D027547 1.8e-57 225.7 115 100.0
BolC2t09934H Brassica oleracea HOM05D022133 ORTHO05D027547 2.4e-54 215.3 110 100.0
BcaC03g16073 Brassica carinata HOM05D022133 ORTHO05D027547 1.8e-33 146.0 74 98.6
C02p16520 Brassica napus HOM05D022133 ORTHO05D027547 5.0e-23 111.3 57 94.7
BraA01t04659Z Brassica rapa HOM05D000629 ORTHO05D000576 5.7e-19 97.8 54 92.6
BNapus_Darmor_BZH_scaffold_119p00100 Brassica napus HOM05D000629 ORTHO05D000576 1.3e-18 96.7 54 90.7
BNapus_Darmor_BZH_scaffold_97p00340 Brassica napus HOM05D000629 ORTHO05D000576 1.3e-18 96.7 54 90.7
BNapus_Darmor_BZH_scaffold_133p00100 Brassica napus HOM05D000629 ORTHO05D000576 4.8e-18 94.7 54 90.7
BcaC09g47650 Brassica carinata HOM05D000629 ORTHO05D000576 8.2e-18 94.0 54 88.9
BolC1t05951H Brassica oleracea HOM05D000629 ORTHO05D000576 1.5e-16 89.7 54 87.0
Thhalv10019899m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 2.1e-13 79.3 53 79.2
AL3G10910 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 4.6e-13 78.2 53 77.4
Sp3g00760 Schrenkiella parvula HOM05D000629 ORTHO05D000576 5.1e-12 74.7 79 58.2
AT3G01320 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 6.7e-12 74.3 53 75.5
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 1.1e-11 73.6 50 78.0
Carub.0003s0081 Capsella rubella HOM05D000629 ORTHO05D000576 1.5e-11 73.2 79 54.4
Carub.0006s1318 Capsella rubella HOM05D000629 ORTHO05D000576 1.4e-09 66.6 81 51.9
AL6G25840 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 2.4e-09 65.9 55 65.5
AT5G15020 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 2.4e-09 65.9 55 65.5
Thhalv10012461m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 4.1e-09 65.1 55 67.3
BcaB01g05087 Brassica carinata HOM05D000629 ORTHO05D000576 6.9e-09 64.3 55 65.5
Sp6g29020 Schrenkiella parvula HOM05D000629 ORTHO05D000576 9.1e-09 63.9 56 64.3
A03p06900 Brassica napus HOM05D000629 ORTHO05D000576 7.7e-08 60.8 55 63.6
BraA03t10012Z Brassica rapa HOM05D000629 ORTHO05D000576 7.7e-08 60.8 55 63.6
CARHR198290 Cardamine hirsuta HOM05D000629 ORTHO05D000576 1.3e-07 60.1 50 66.0
C03p07890 Brassica napus HOM05D000629 ORTHO05D000576 1.7e-07 59.7 51 64.7
BolC3t13287H Brassica oleracea HOM05D000629 ORTHO05D000576 1.7e-07 59.7 51 64.7
THA.LOC104822375 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.7e-07 59.7 55 61.8
Aa31LG11G14500 Aethionema arabicum HOM05D000629 ORTHO05D000576 2.2e-07 59.3 55 63.6
Gorai.007G077800 Gossypium raimondii HOM05D000629 ORTHO05D000576 2.9e-07 58.9 50 62.0
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 3.8e-07 58.5 56 62.5
Gohir.A11G068400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 3.8e-07 58.5 79 46.8
C02p07460 Brassica napus HOM05D000629 ORTHO05D000576 6.5e-07 57.8 56 60.7
BolC2t06677H Brassica oleracea HOM05D000629 ORTHO05D000576 6.5e-07 57.8 56 60.7
Atru.chr8.2428 Acer truncatum HOM05D000629 ORTHO05D000576 8.5e-07 57.4 53 54.7
THA.LOC104821055 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 1.1e-06 57.0 49 63.3
A02p02840 Brassica napus HOM05D000629 ORTHO05D000576 2.5e-06 55.8 56 62.5
Gohir.D11G072600 Gossypium hirsutum HOM05D000629 ORTHO05D000576 2.5e-06 55.8 50 60.0
Thecc.04G065500 Theobroma cacao HOM05D000629 ORTHO05D000576 2.5e-06 55.8 54 55.6
Duzib187G0377 Durio zibethinus HOM05D000629 ORTHO05D000576 9.4e-06 53.9 53 50.9


User provided reference genes

Program Settings