Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p36230 Brassica napus HOM05D014537 ORTHO05D018683 1.0e-56 223.0 103 100.0
C09p13310 Brassica napus HOM05D014537 ORTHO05D018683 5.2e-48 194.1 107 86.9
BolC8t47301H Brassica oleracea HOM05D014537 ORTHO05D018683 1.2e-44 183.0 106 84.9
C08p04990 Brassica napus HOM05D014537 ORTHO05D018683 4.6e-44 181.0 108 81.5
BolC9t54224H Brassica oleracea HOM05D014537 ORTHO05D018683 3.0e-43 178.3 100 87.0
BraA08t33832Z Brassica rapa HOM05D014537 ORTHO05D018683 3.2e-21 105.1 71 66.2
BolC4t23335H Brassica oleracea HOM05D014537 ORTHO05D033624 6.0e-12 74.3 39 87.2
C04p17870 Brassica napus HOM05D014537 ORTHO05D033624 1.0e-11 73.6 36 91.7
AL2G35640 Arabidopsis lyrata HOM05D000917 ORTHO05D000764 1.1e-08 63.5 35 74.3
CARHR069050 Cardamine hirsuta HOM05D000917 ORTHO05D000764 1.1e-08 63.5 35 74.3
Sp5g30760 Schrenkiella parvula HOM05D000917 ORTHO05D000764 1.1e-08 63.5 35 74.3
AT1G75660 Arabidopsis thaliana HOM05D000917 ORTHO05D000764 1.4e-08 63.2 35 71.4
Carub.0002s2249 Capsella rubella HOM05D000917 ORTHO05D000764 1.4e-08 63.2 35 71.4
Potri.005G237500 Populus trichocarpa HOM05D000917 ORTHO05D000764 3.1e-08 62.0 80 45.0
Sabra05G0183600 Salix brachista HOM05D000917 ORTHO05D000764 3.1e-08 62.0 80 45.0
A02p20110 Brassica napus HOM05D000917 ORTHO05D000764 4.0e-08 61.6 35 71.4
BraA02t07046Z Brassica rapa HOM05D000917 ORTHO05D000764 4.0e-08 61.6 35 71.4
Thhalv10018062m.g Eutrema salsugineum HOM05D000917 ORTHO05D000764 4.0e-08 61.6 35 71.4
Aa31LG3G570 Aethionema arabicum HOM05D000917 ORTHO05D000764 5.3e-08 61.2 34 73.5
Aa31sc115G50 Aethionema arabicum HOM05D000917 ORTHO05D000764 5.3e-08 61.2 34 73.5
BcaB05g24928 Brassica carinata HOM05D000917 ORTHO05D000764 9.0e-08 60.5 35 71.4
THA.LOC104809408 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 9.0e-08 60.5 35 68.6
BcaC08g47056 Brassica carinata HOM05D000917 ORTHO05D000764 1.5e-07 59.7 35 68.6
A07p41190 Brassica napus HOM05D000917 ORTHO05D000764 1.5e-07 59.7 35 68.6
C06p49610 Brassica napus HOM05D000917 ORTHO05D000764 1.5e-07 59.7 35 68.6
BolC6t39999H Brassica oleracea HOM05D000917 ORTHO05D000764 1.5e-07 59.7 35 68.6
BraA07t31654Z Brassica rapa HOM05D000917 ORTHO05D000764 1.5e-07 59.7 35 68.6
BolC2t09322H Brassica oleracea HOM05D000917 ORTHO05D000764 2.0e-07 59.3 43 60.5
Ciclev10000087m.g Citrus clementina HOM05D000917 ORTHO05D000764 2.6e-07 58.9 91 35.2
Duzib041G0621 Durio zibethinus HOM05D000917 ORTHO05D000764 2.6e-07 58.9 84 36.9
Gohir.A05G257200 Gossypium hirsutum HOM05D000917 ORTHO05D000764 2.6e-07 58.9 84 36.9
Gohir.D05G258700 Gossypium hirsutum HOM05D000917 ORTHO05D000764 2.6e-07 58.9 84 36.9
Gorai.009G270300 Gossypium raimondii HOM05D000917 ORTHO05D000764 2.6e-07 58.9 84 36.9
Atru.chr13.317 Acer truncatum HOM05D000917 ORTHO05D000764 3.4e-07 58.5 93 37.6
BcaC03g15606 Brassica carinata HOM05D000917 ORTHO05D000764 3.4e-07 58.5 35 68.6
C02p33820 Brassica napus HOM05D000917 ORTHO05D000764 3.4e-07 58.5 35 68.6
Duzib093G1078 Durio zibethinus HOM05D000917 ORTHO05D000764 4.5e-07 58.2 35 62.9
Thecc.08G042300 Theobroma cacao HOM05D000917 ORTHO05D000764 4.5e-07 58.2 35 62.9
Gohir.A05G187400 Gossypium hirsutum HOM05D000917 ORTHO05D000764 7.6e-07 57.4 35 62.9
Gohir.D05G190300 Gossypium hirsutum HOM05D000917 ORTHO05D000764 7.6e-07 57.4 35 62.9
Gorai.009G195600 Gossypium raimondii HOM05D000917 ORTHO05D000764 7.6e-07 57.4 35 62.9
Potri.002G024100 Populus trichocarpa HOM05D000917 ORTHO05D000764 7.6e-07 57.4 80 42.5
THA.LOC104813193 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 1.3e-06 56.6 84 39.3
TWI36G0418 Tripterygium wilfordii HOM05D000917 ORTHO05D000764 1.7e-06 56.2 34 61.8
CiPaw.08G065200 Carya illinoinensis HOM05D000917 ORTHO05D000764 2.9e-06 55.5 34 67.6
Manes.05G149100 Manihot esculenta HOM05D000917 ORTHO05D000764 2.9e-06 55.5 35 62.9
COL.COLO4_26163 Corchorus olitorius HOM05D000917 ORTHO05D018683 3.8e-06 55.1 85 35.3
QL02p011305 Quercus lobata HOM05D000917 ORTHO05D000764 3.8e-06 55.1 84 40.5
TWI56G1011 Tripterygium wilfordii HOM05D000917 ORTHO05D000764 3.8e-06 55.1 42 54.8
Haze_22617 Corylus avellana HOM05D000917 ORTHO05D000764 4.9e-06 54.7 83 39.8
Cfa013934 Carpinus fangiana HOM05D000917 ORTHO05D000764 6.4e-06 54.3 83 41.0
ClCG09G021910 Citrullus lanatus HOM05D000917 ORTHO05D000764 8.4e-06 53.9 42 54.8
Sp1g12700 Schrenkiella parvula HOM05D000917 ORTHO05D000764 8.4e-06 53.9 35 57.1
THA.LOC104811387 Tarenaya hassleriana HOM05D000917 ORTHO05D000764 8.4e-06 53.9 35 62.9


User provided reference genes

Program Settings