Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33360 Brassica napus HOM05D008570 ORTHO05D005639 1.6e-69 266.5 195 100.0
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 5.0e-68 261.5 195 95.9
BraA02t07079Z Brassica rapa HOM05D008570 ORTHO05D005639 2.3e-60 236.1 195 92.3
A02p20480 Brassica napus HOM05D008570 ORTHO05D005639 5.0e-60 235.0 195 91.8
BcaB05g24972 Brassica carinata HOM05D008570 ORTHO05D005639 5.0e-52 208.4 198 86.4
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 3.4e-48 195.7 197 83.8
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 3.4e-48 195.7 197 83.8
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 3.9e-44 182.2 195 80.5
Thhalv10019152m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 4.7e-42 175.3 202 79.7
A07p41750 Brassica napus HOM05D008570 ORTHO05D005639 8.1e-42 174.5 196 80.6
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 8.1e-42 174.5 199 80.4
BraA07t31704Z Brassica rapa HOM05D008570 ORTHO05D005639 2.4e-41 172.9 201 78.6
BcaC08g47112 Brassica carinata HOM05D008570 ORTHO05D005639 3.1e-41 172.6 197 81.2
C06p50130 Brassica napus HOM05D008570 ORTHO05D005639 3.4e-40 169.1 200 80.0
Sp5g31320 Schrenkiella parvula HOM05D008570 ORTHO05D005639 1.7e-36 156.8 203 75.9
C06p32190 Brassica napus HOM05D008570 ORTHO05D005639 1.1e-33 147.5 168 76.8
CARHR069730 Cardamine hirsuta HOM05D008570 ORTHO05D005639 9.9e-32 141.0 199 69.8
AT1G76180 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 2.2e-31 139.8 197 73.1
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 2.9e-31 139.4 207 69.1
Aa31LG4G6290 Aethionema arabicum HOM05D008570 ORTHO05D005639 1.1e-27 127.5 201 69.7
AL2G36240 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.3e-23 114.0 134 76.9
BcaC08g45541 Brassica carinata HOM05D008570 ORTHO05D005639 1.4e-22 110.5 135 75.6
THA.LOC104813763 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 3.9e-20 102.4 197 63.5
AL1G33370 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.1e-19 100.9 171 50.9
Thhalv10008313m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 4.8e-18 95.5 261 51.3
AT1G20440 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 1.4e-17 94.0 172 49.4
Carub.0001s1991 Capsella rubella HOM05D008570 ORTHO05D005639 2.0e-16 90.1 175 47.4
BcaNung03383 Brassica carinata HOM05D008570 ORTHO05D005639 5.8e-16 88.6 216 54.6
C07p23020 Brassica napus HOM05D008570 ORTHO05D005639 5.8e-16 88.6 216 54.6
BcaB03g14320 Brassica carinata HOM05D008570 ORTHO05D005639 8.4e-15 84.7 221 52.0
AT1G20450 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 1.4e-14 84.0 182 52.7
BolC7t42843H Brassica oleracea HOM05D008570 ORTHO05D005639 1.4e-14 84.0 220 53.2
Carub.0001s1992 Capsella rubella HOM05D008570 ORTHO05D005639 1.4e-14 84.0 168 55.4
BcaC05g25955 Brassica carinata HOM05D008570 ORTHO05D005639 1.6e-13 80.5 180 50.6
BNapus_Darmor_BZH_scaffold_170p00020 Brassica napus HOM05D008570 ORTHO05D005639 1.6e-13 80.5 179 50.3
C05p19040 Brassica napus HOM05D008570 ORTHO05D005639 1.6e-13 80.5 180 50.6
BolC5t30605H Brassica oleracea HOM05D008570 ORTHO05D005639 1.6e-13 80.5 183 47.5
BraA07t29305Z Brassica rapa HOM05D008570 ORTHO05D005639 2.1e-13 80.1 220 51.4
A07p15780 Brassica napus HOM05D008570 ORTHO05D005639 4.6e-13 79.0 181 48.1
A07p15670 Brassica napus HOM05D008570 ORTHO05D005639 7.9e-13 78.2 220 50.9
BcaB07g32047 Brassica carinata HOM05D008570 ORTHO05D005639 1.3e-12 77.4 189 49.7
BraA06t24754Z Brassica rapa HOM05D008570 ORTHO05D005639 6.7e-12 75.1 186 45.7
Sp1g18160 Schrenkiella parvula HOM05D008570 ORTHO05D005639 4.3e-11 72.4 229 48.9
Aqoxy6G01838 Aquilegia oxysepala HOM05D008201 ORTHO05D005639 7.4e-11 71.6 197 41.1
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 1.3e-10 70.9 144 41.7
Medtr3g117290 Medicago truncatula HOM05D015205 ORTHO05D005639 1.3e-10 70.9 152 55.9
Thhalv10008706m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 1.6e-10 70.5 148 46.6
CARHR020900 Cardamine hirsuta HOM05D008570 ORTHO05D005639 2.8e-10 69.7 176 45.5
AL1G33380 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 3.7e-10 69.3 165 52.1
Psat5g004800 Pisum sativum HOM05D015205 ORTHO05D005639 6.2e-10 68.6 170 51.8
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 1.1e-09 67.8 228 50.4
Sabra05G0191700 Salix brachista HOM05D008201 ORTHO05D005639 1.2e-08 64.3 155 38.1
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 1.5e-08 63.9 84 51.2
TAR376G0148 Trochodendron aralioides HOM05D008201 ORTHO05D005639 1.5e-08 63.9 186 45.7
Eucgr.F01726 Eucalyptus grandis HOM05D008201 ORTHO05D005639 2.0e-08 63.5 211 41.7
TPR.G32200 Trifolium pratense HOM05D015205 ORTHO05D005639 2.6e-08 63.2 171 45.0
CiPaw.08G071500 Carya illinoinensis HOM05D008201 ORTHO05D005639 4.5e-08 62.4 189 44.4
Lsat_1_v5_gn_8_27820 Lactuca sativa HOM05D008201 ORTHO05D005639 4.5e-08 62.4 151 51.7
Gohir.A01G107800 Gossypium hirsutum HOM05D008201 ORTHO05D005639 7.6e-08 61.6 166 48.2
BcaC03g15649 Brassica carinata HOM05D002666 ORTHO05D011316 1.0e-07 61.2 71 56.3
Lsat_1_v5_gn_8_28441 Lactuca sativa HOM05D008570 ORTHO05D005639 1.3e-07 60.8 126 53.2
arahy.Tifrunner.gnm1.ann1.QP4M0U Arachis hypogaea HOM05D008201 ORTHO05D005639 1.7e-07 60.5 214 42.5
CSS0003901 Camellia sinensis var. sinensis HOM05D008201 ORTHO05D005639 4.9e-07 58.9 200 30.5
Lj1g0003360 Lotus japonicus HOM05D015205 ORTHO05D005639 4.9e-07 58.9 148 49.3
Oeu016882.1 Olea europaea HOM05D008201 ORTHO05D005639 8.4e-07 58.2 185 50.3
Actinidia17030 Actinidia chinensis HOM05D000356 ORTHO05D000265 3.2e-06 56.2 137 51.8
Ca_15345_v3 Cicer arietinum L. HOM05D015205 ORTHO05D005639 5.5e-06 55.5 157 31.2
Ca_30250_v3 Cicer arietinum L. HOM05D015205 ORTHO05D005639 5.5e-06 55.5 157 31.2


User provided reference genes

Program Settings