Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 2.8e-170 602.1 343 100.0
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 2.1e-146 522.7 342 90.6
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 2.1e-146 522.7 343 90.7
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 2.1e-117 426.4 325 79.7
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 1.7e-103 380.2 238 95.0
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 7.9e-93 344.7 216 95.4
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 4.2e-86 322.4 362 63.5
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 2.3e-68 263.5 322 61.8
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 9.8e-67 258.1 178 92.7
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 2.8e-66 256.5 318 61.0
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 3.5e-64 249.6 178 90.4
A03p64860 Brassica napus HOM05D004147 ORTHO05D018802 1.1e-49 201.4 209 60.3
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 3.3e-46 189.9 138 93.5
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 1.2e-45 188.0 138 91.3
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 1.5e-35 154.5 118 72.9
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 2.6e-35 153.7 119 72.3
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 2.6e-35 153.7 119 72.3
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 3.4e-35 153.3 119 71.4
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 4.4e-35 152.9 118 73.7
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 4.9e-34 149.4 118 71.2
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 6.4e-34 149.1 119 71.4
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 1.9e-33 147.5 118 72.0
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 5.4e-33 146.0 118 69.5
BolC5t32092H Brassica oleracea HOM05D004147 ORTHO05D018802 3.9e-31 139.8 85 92.9
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 1.6e-29 134.4 118 68.6
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 8.1e-29 132.1 115 68.7
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 8.1e-29 132.1 115 68.7
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 6.8e-28 129.0 118 62.7
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 8.9e-28 128.6 125 59.2
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 2.6e-27 127.1 115 60.0
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 2.6e-27 127.1 118 61.9
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 7.6e-27 125.6 118 61.0
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 9.9e-27 125.2 118 61.0
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 1.3e-26 124.8 118 61.0
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 1.7e-26 124.4 118 59.3
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 1.7e-26 124.4 117 62.4
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 1.7e-26 124.4 115 60.0
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 1.7e-26 124.4 118 61.0
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 2.2e-26 124.0 118 62.7
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 2.2e-26 124.0 118 61.0
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 2.9e-26 123.6 118 60.2
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 2.9e-26 123.6 118 60.2
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 3.8e-26 123.2 106 68.9
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 3.8e-26 123.2 119 60.5
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 3.8e-26 123.2 118 59.3
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 4.9e-26 122.9 118 62.7
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 4.9e-26 122.9 118 60.2
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 4.9e-26 122.9 118 60.2
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 4.9e-26 122.9 115 57.4
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 8.4e-26 122.1 116 58.6
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 8.4e-26 122.1 116 58.6
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 8.4e-26 122.1 117 60.7
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 8.4e-26 122.1 118 59.3
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 8.4e-26 122.1 119 60.5
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 1.1e-25 121.7 118 59.3
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 1.1e-25 121.7 118 60.2
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 1.1e-25 121.7 117 59.8
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 1.1e-25 121.7 112 61.6
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 1.4e-25 121.3 119 58.8
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 1.4e-25 121.3 119 59.7
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.4e-25 121.3 119 59.7
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.4e-25 121.3 119 58.8
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 1.4e-25 121.3 119 59.7
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 1.9e-25 120.9 118 59.3
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 1.9e-25 120.9 117 56.4
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.4e-25 120.6 119 61.3
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.2e-25 120.2 115 60.0
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 4.2e-25 119.8 119 60.5
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 4.2e-25 119.8 119 60.5
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 4.2e-25 119.8 119 60.5
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 4.2e-25 119.8 118 59.3
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 5.4e-25 119.4 118 59.3
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 5.4e-25 119.4 120 58.3
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 7.1e-25 119.0 118 59.3
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 7.1e-25 119.0 117 60.7
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 9.3e-25 118.6 118 57.6
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 9.3e-25 118.6 120 57.5
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.2e-24 118.2 119 60.5
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 1.2e-24 118.2 118 60.2
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 1.2e-24 118.2 119 59.7
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 1.6e-24 117.9 118 58.5
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 1.6e-24 117.9 118 56.8
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 2.1e-24 117.5 118 57.6
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 2.1e-24 117.5 117 59.8
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 2.1e-24 117.5 118 59.3
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 2.1e-24 117.5 118 59.3
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 2.1e-24 117.5 119 58.0
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 2.7e-24 117.1 117 56.4
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 2.7e-24 117.1 118 58.5
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 2.7e-24 117.1 118 60.2
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 2.7e-24 117.1 118 60.2
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 2.7e-24 117.1 120 57.5
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 2.7e-24 117.1 115 60.0
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.7e-24 117.1 118 57.6
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.7e-24 117.1 118 57.6
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 2.7e-24 117.1 105 63.8
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 3.5e-24 116.7 118 60.2
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 3.5e-24 116.7 119 58.0
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 4.6e-24 116.3 118 57.6
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 4.6e-24 116.3 118 58.5
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 6.0e-24 115.9 118 57.6
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 6.0e-24 115.9 118 58.5
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 7.8e-24 115.5 118 56.8
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 7.8e-24 115.5 120 55.8
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 7.8e-24 115.5 118 58.5
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 1.3e-23 114.8 118 57.6
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 1.7e-23 114.4 118 56.8
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 2.3e-23 114.0 118 57.6
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 3.0e-23 113.6 117 56.4
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 5.1e-23 112.8 118 56.8
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 5.1e-23 112.8 118 55.9
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 5.1e-23 112.8 119 55.5
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 6.6e-23 112.5 117 58.1
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 6.6e-23 112.5 118 57.6
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 8.7e-23 112.1 119 55.5
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 2.5e-22 110.5 118 54.2
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 4.3e-22 109.8 120 55.8
BraA07t28876Z Brassica rapa HOM05D004147 ORTHO05D018802 5.6e-22 109.4 114 61.4
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 5.6e-22 109.4 114 54.4
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.3e-21 108.2 119 52.9
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.1e-21 107.5 118 51.7
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 2.8e-21 107.1 115 54.8
A07p10860 Brassica napus HOM05D004147 ORTHO05D018802 3.6e-21 106.7 114 60.5
A07p10870 Brassica napus HOM05D004147 ORTHO05D018802 3.6e-21 106.7 114 60.5
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 4.8e-21 106.3 105 56.2
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 4.8e-21 106.3 119 52.9
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 6.2e-21 105.9 116 52.6
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.4e-20 104.0 118 51.7
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 3.1e-20 103.6 122 53.3
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 3.1e-20 103.6 122 53.3
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 5.3e-20 102.8 120 53.3
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 1.2e-19 101.7 122 54.9
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 1.5e-19 101.3 96 62.5
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 2.6e-19 100.5 122 51.6
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 9.9e-19 98.6 127 51.2
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 1.7e-18 97.8 127 51.2
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 6.4e-18 95.9 118 48.3
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 6.4e-18 95.9 112 47.3
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.4e-17 94.0 116 46.6
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 4.2e-17 93.2 116 46.6
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 7.1e-17 92.4 116 44.8
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 1.7e-15 87.8 183 40.4
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 1.5e-14 84.7 73 63.0
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 1.5e-14 84.7 73 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 2.4e-12 77.4 126 39.7
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 9.0e-12 75.5 112 43.8
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.2e-11 75.1 124 36.3
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 5.8e-11 72.8 127 36.2
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 2.9e-10 70.5 65 61.5
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 7.9e-08 62.4 115 34.8
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 1.3e-07 61.6 63 55.6
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 1.3e-07 61.6 31 90.3
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 8.7e-07 58.9 44 70.5


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