Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p29760 Brassica napus HOM05D034500 ORTHO05D042437 6.8e-148 527.3 271 100.0
BolC2t09024H Brassica oleracea HOM05D034500 ORTHO05D042437 1.6e-101 373.2 201 97.5
BcaC05g28815 Brassica carinata HOM05D000226 ORTHO05D000142 4.2e-20 102.8 78 75.6
C05p49190 Brassica napus HOM05D000226 ORTHO05D000142 1.3e-18 97.8 75 76.0
BcaB03g15053 Brassica carinata HOM05D000226 ORTHO05D000142 2.1e-08 63.9 64 57.8
BolC4t23013H Brassica oleracea HOM05D000226 ORTHO05D000142 2.1e-08 63.9 63 61.9
Thhalv10018189m.g Eutrema salsugineum HOM05D000226 ORTHO05D000142 2.1e-08 63.9 64 57.8
BcaC08g46760 Brassica carinata HOM05D000226 ORTHO05D000142 3.6e-08 63.2 64 56.2
A07p39330 Brassica napus HOM05D000226 ORTHO05D000142 3.6e-08 63.2 64 56.2
C06p47560 Brassica napus HOM05D000226 ORTHO05D000142 3.6e-08 63.2 64 56.2
BolC6t39794H Brassica oleracea HOM05D000226 ORTHO05D000142 3.6e-08 63.2 64 56.2
BraA05t19947Z Brassica rapa HOM05D000226 ORTHO05D020019 3.6e-08 63.2 34 88.2
BraA07t31482Z Brassica rapa HOM05D000226 ORTHO05D000142 3.6e-08 63.2 64 56.2
Sp5g28290 Schrenkiella parvula HOM05D000226 ORTHO05D000142 4.8e-08 62.8 64 56.2
BraA09t40731Z Brassica rapa HOM05D000226 ORTHO05D020215 6.2e-08 62.4 36 86.1
AL2G33140 Arabidopsis lyrata HOM05D000226 ORTHO05D000142 8.1e-08 62.0 64 56.2
AT1G73360 Arabidopsis thaliana HOM05D000226 ORTHO05D000142 8.1e-08 62.0 64 56.2
C04p14270 Brassica napus HOM05D000226 ORTHO05D000142 8.1e-08 62.0 35 85.7
Carub.0002s2010 Capsella rubella HOM05D000226 ORTHO05D000142 8.1e-08 62.0 64 56.2
BcaC08g45647 Brassica carinata HOM05D000226 ORTHO05D000142 1.1e-07 61.6 65 53.8
C04p45050 Brassica napus HOM05D000226 ORTHO05D000142 1.1e-07 61.6 64 59.4
C06p34050 Brassica napus HOM05D000226 ORTHO05D000142 1.1e-07 61.6 65 53.8
BolC4t26083H Brassica oleracea HOM05D000226 ORTHO05D000142 1.1e-07 61.6 64 59.4
BolC6t38520H Brassica oleracea HOM05D000226 ORTHO05D000142 1.1e-07 61.6 65 53.8
BcaB03g15708 Brassica carinata HOM05D000226 ORTHO05D000142 1.8e-07 60.8 65 52.3
A07p29830 Brassica napus HOM05D000226 ORTHO05D000142 1.8e-07 60.8 65 52.3
BraA07t30621Z Brassica rapa HOM05D000226 ORTHO05D000142 1.8e-07 60.8 65 52.3
Aa31LG4G3630 Aethionema arabicum HOM05D000226 ORTHO05D000142 2.4e-07 60.5 64 56.2
BcaB01g02777 Brassica carinata HOM05D000032 ORTHO05D004353 6.9e-07 58.9 103 45.6
A09p53050 Brassica napus HOM05D000226 ORTHO05D020215 9.0e-07 58.5 36 80.6
BcaB07g33498 Brassica carinata HOM05D000226 ORTHO05D020019 1.2e-06 58.2 32 87.5
BcaC01g04703 Brassica carinata HOM05D000032 ORTHO05D004353 1.2e-06 58.2 112 42.0
A03p28720 Brassica napus HOM05D000032 ORTHO05D004353 1.2e-06 58.2 112 42.0
C03p34730 Brassica napus HOM05D000032 ORTHO05D004353 1.2e-06 58.2 112 42.0
BolC3t15783H Brassica oleracea HOM05D000032 ORTHO05D004353 1.2e-06 58.2 112 42.0
AL1G30270 Arabidopsis lyrata HOM05D000226 ORTHO05D000142 1.5e-06 57.8 64 54.7
AL6G43350 Arabidopsis lyrata HOM05D000032 ORTHO05D004353 1.5e-06 57.8 90 45.6
AT1G17920 Arabidopsis thaliana HOM05D000226 ORTHO05D000142 1.5e-06 57.8 64 54.7
BcaB05g21719 Brassica carinata HOM05D000226 ORTHO05D000142 1.5e-06 57.8 33 84.8
Carub.0001s1763 Capsella rubella HOM05D000226 ORTHO05D000142 1.5e-06 57.8 64 54.7
Thhalv10006969m.g Eutrema salsugineum HOM05D000226 ORTHO05D000142 1.5e-06 57.8 64 54.7
Aa31LG7G2710 Aethionema arabicum HOM05D000226 ORTHO05D000142 2.0e-06 57.4 64 54.7
C08p18250 Brassica napus HOM05D000226 ORTHO05D000142 2.6e-06 57.0 64 54.7
CARHR066410 Cardamine hirsuta HOM05D000226 ORTHO05D000142 2.6e-06 57.0 52 57.7
BraA03t12071Z Brassica rapa HOM05D000032 ORTHO05D004353 3.4e-06 56.6 101 44.6
Sp1g15990 Schrenkiella parvula HOM05D000226 ORTHO05D000142 3.4e-06 56.6 64 53.1
BcaB03g13524 Brassica carinata HOM05D000226 ORTHO05D000142 5.8e-06 55.8 64 53.1
A08p30660 Brassica napus HOM05D000226 ORTHO05D000142 5.8e-06 55.8 64 53.1
BraA08t34996Z Brassica rapa HOM05D000226 ORTHO05D000142 5.8e-06 55.8 64 53.1
AT4G09730 Arabidopsis thaliana HOM05D000032 ORTHO05D004353 7.6e-06 55.5 91 45.1
BcaB01g01266 Brassica carinata HOM05D000313 ORTHO05D000065 9.9e-06 55.1 28 89.3
BcaB07g34014 Brassica carinata HOM05D000226 ORTHO05D000142 9.9e-06 55.1 59 52.5
A06p13960 Brassica napus HOM05D000226 ORTHO05D000142 9.9e-06 55.1 59 52.5
C05p16280 Brassica napus HOM05D000226 ORTHO05D000142 9.9e-06 55.1 59 52.5
BolC5t30330H Brassica oleracea HOM05D000226 ORTHO05D000142 9.9e-06 55.1 59 52.5
BraA06t24536Z Brassica rapa HOM05D000226 ORTHO05D000142 9.9e-06 55.1 59 52.5


User provided reference genes

Program Settings