Gene: Carub.0002s2010

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s2010
  • Transcript Identifier Carub.0002s2010.1
  • Gene Type Coding gene
  • Location scaffold_2 : 11139924-11142883 : negative

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s2010.v1.1
  • pacid 39243313
  • synonym Carubv10021491m.g

Descriptions

  • Description PTHR24326//PTHR24326:SF236 - FAMILY NOT NAMED // HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG12
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009828
ISO
PLAZA Integrative Orthologyplant-type cell wall loosening AT1G73360
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT1G73360

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
InterProlipid binding
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G73360
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73360
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G73360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002913 START domain
IPR023393 START-like domain superfamily
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)