Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p20750 Brassica napus HOM05D001717 ORTHO05D100277 7.0e-50 200.3 99 100.0
A02p33380 Brassica napus HOM05D001717 ORTHO05D100529 1.5e-31 139.4 93 79.6
CARHR270780 Cardamine hirsuta HOM05D001717 ORTHO05D007217 1.1e-13 80.1 97 48.5
BcaB08g36016 Brassica carinata HOM05D001717 ORTHO05D007217 3.1e-13 78.6 97 48.5
AT5G57030 Arabidopsis thaliana HOM05D001717 ORTHO05D007217 4.0e-13 78.2 100 51.0
BcaC01g06460 Brassica carinata HOM05D001717 ORTHO05D007217 5.2e-13 77.8 67 62.7
C03p15210 Brassica napus HOM05D001717 ORTHO05D007217 5.2e-13 77.8 67 62.7
BolC3t13962H Brassica oleracea HOM05D001717 ORTHO05D007217 5.2e-13 77.8 67 62.7
Carub.0008s1753 Capsella rubella HOM05D001717 ORTHO05D007217 6.8e-13 77.4 67 61.2
AL8G32930 Arabidopsis lyrata HOM05D001717 ORTHO05D007217 8.9e-13 77.0 83 56.6
BcaB08g36018 Brassica carinata HOM05D001717 ORTHO05D007217 8.9e-13 77.0 83 56.6
BcaB08g36024 Brassica carinata HOM05D001717 ORTHO05D007217 8.9e-13 77.0 83 56.6
A10p14350 Brassica napus HOM05D001717 ORTHO05D007217 8.9e-13 77.0 97 47.4
BraA10t43526Z Brassica rapa HOM05D001717 ORTHO05D007217 1.2e-12 76.6 97 46.4
Thhalv10013234m.g Eutrema salsugineum HOM05D001717 ORTHO05D007217 1.2e-12 76.6 92 48.9
A03p13030 Brassica napus HOM05D001717 ORTHO05D007217 1.5e-12 76.3 67 61.2
BraA03t10613Z Brassica rapa HOM05D001717 ORTHO05D007217 1.5e-12 76.3 67 61.2
BolC9t57717H Brassica oleracea HOM05D001717 ORTHO05D007217 2.6e-12 75.5 97 46.4
Hma1.2p1_0672F.1_g200970 Hydrangea macrophylla HOM05D001717 ORTHO05D007217 2.6e-12 75.5 83 53.0
Aa31LG3G12920 Aethionema arabicum HOM05D001717 ORTHO05D007217 3.4e-12 75.1 82 54.9
BcaB01g04439 Brassica carinata HOM05D001717 ORTHO05D007217 3.4e-12 75.1 83 55.4
BcaB05g22312 Brassica carinata HOM05D001717 ORTHO05D007217 5.8e-12 74.3 65 61.5
BcaC04g20021 Brassica carinata HOM05D001717 ORTHO05D007217 5.8e-12 74.3 97 45.4
C09p48690 Brassica napus HOM05D001717 ORTHO05D007217 5.8e-12 74.3 97 45.4
Manes.16G099600 Manihot esculenta HOM05D001717 ORTHO05D007217 7.5e-12 73.9 67 59.7
Cc06_g11680 Coffea canephora HOM05D001717 ORTHO05D007217 9.9e-12 73.6 83 53.0
Sp6g18740 Schrenkiella parvula HOM05D001717 ORTHO05D007217 1.3e-11 73.2 83 54.2
vmacro06304 Vaccinium macrocarpon HOM05D001717 ORTHO05D007217 1.7e-11 72.8 67 55.2
AUR62029030 Chenopodium quinoa HOM05D001717 ORTHO05D007217 2.2e-11 72.4 98 48.0
Oeu051301.2 Olea europaea HOM05D001717 ORTHO05D007217 2.2e-11 72.4 67 56.7
PGR044G0216 Punica granatum HOM05D001717 ORTHO05D007217 2.2e-11 72.4 83 53.0
unitig_899.g15176 Utricularia gibba HOM05D001717 ORTHO05D007217 2.2e-11 72.4 83 51.8
COL.COLO4_18171 Corchorus olitorius HOM05D001717 ORTHO05D007217 2.9e-11 72.0 67 58.2
Gohir.A05G031300 Gossypium hirsutum HOM05D001717 ORTHO05D007217 2.9e-11 72.0 67 58.2
THA.LOC104811752 Tarenaya hassleriana HOM05D001717 ORTHO05D007217 2.9e-11 72.0 98 49.0
GSVIVG01015169001 Vitis vinifera HOM05D001717 ORTHO05D007217 4.9e-11 71.2 83 51.8
ClCG11G001670 Citrullus lanatus HOM05D001717 ORTHO05D007217 6.4e-11 70.9 83 53.0
MELO3C004633.2 Cucumis melo HOM05D001717 ORTHO05D007217 6.4e-11 70.9 83 53.0
CsaV3_2G001370 Cucumis sativus L. HOM05D001717 ORTHO05D007217 6.4e-11 70.9 83 53.0
DCAR_028276 Daucus carota HOM05D001717 ORTHO05D007217 6.4e-11 70.9 67 56.7
HanXRQChr03g0060261 Helianthus annuus HOM05D001717 ORTHO05D007217 6.4e-11 70.9 67 58.2
HanXRQChr05g0128961 Helianthus annuus HOM05D001717 ORTHO05D007217 6.4e-11 70.9 67 58.2
Psat1g140400 Pisum sativum HOM05D001717 ORTHO05D007217 6.4e-11 70.9 65 58.5
QL02p062060 Quercus lobata HOM05D001717 ORTHO05D007217 6.4e-11 70.9 81 53.1
Sed0013443 Sechium edule HOM05D001717 ORTHO05D007217 6.4e-11 70.9 83 53.0
TAR626G1800 Trochodendron aralioides HOM05D001717 ORTHO05D007217 6.4e-11 70.9 83 51.8
Atru.chr7.1632 Acer truncatum HOM05D001717 ORTHO05D007217 8.3e-11 70.5 67 55.2
arahy.Tifrunner.gnm1.ann1.1PI95V Arachis hypogaea HOM05D001717 ORTHO05D007217 8.3e-11 70.5 65 58.5
arahy.Tifrunner.gnm1.ann1.HJX0E8 Arachis hypogaea HOM05D001717 ORTHO05D007217 8.3e-11 70.5 65 58.5
AUR62033926 Chenopodium quinoa HOM05D001717 ORTHO05D007217 8.3e-11 70.5 98 46.9
Ca_13129_v3 Cicer arietinum L. HOM05D001717 ORTHO05D007217 8.3e-11 70.5 65 58.5
ECA240G2539 Erigeron canadensis HOM05D001717 ORTHO05D007217 8.3e-11 70.5 67 56.7
Migut.L01523 Erythranthe guttata HOM05D001717 ORTHO05D007217 8.3e-11 70.5 83 50.6
Gohir.D05G032700 Gossypium hirsutum HOM05D001717 ORTHO05D007217 8.3e-11 70.5 67 56.7
Gorai.009G032900 Gossypium raimondii HOM05D001717 ORTHO05D007217 8.3e-11 70.5 67 56.7
Lalb_Chr08g0232411 Lupinus albus HOM05D001717 ORTHO05D007217 8.3e-11 70.5 65 58.5
Hund08694 Selenicereus undatus HOM05D001717 ORTHO05D007217 8.3e-11 70.5 83 50.6
Cfa003054 Carpinus fangiana HOM05D001717 ORTHO05D007217 1.1e-10 70.1 81 53.1
Haze_25942 Corylus avellana HOM05D001717 ORTHO05D007217 1.1e-10 70.1 81 53.1
Glyma.15G172200 Glycine max HOM05D001717 ORTHO05D007217 1.1e-10 70.1 81 53.1
Rhsim03G0231100 Rhododendron simsii HOM05D001717 ORTHO05D007217 1.1e-10 70.1 83 50.6
Actinidia29912 Actinidia chinensis HOM05D001717 ORTHO05D007217 1.4e-10 69.7 71 53.5
Actinidia38458 Actinidia chinensis HOM05D001717 ORTHO05D007217 1.4e-10 69.7 81 51.9
Cpa.g.sc28.134 Carica papaya HOM05D001717 ORTHO05D007217 1.4e-10 69.7 81 51.9
Dinv36788 Davidia involucrata HOM05D001717 ORTHO05D007217 1.4e-10 69.7 90 43.3
Eucgr.C03415 Eucalyptus grandis HOM05D001717 ORTHO05D007217 1.4e-10 69.7 67 55.2
Glyma.09G066200 Glycine max HOM05D001717 ORTHO05D007217 1.4e-10 69.7 81 53.1
Potri.006G147300 Populus trichocarpa HOM05D001717 ORTHO05D007217 1.4e-10 69.7 96 47.9
Thecc.09G084800 Theobroma cacao HOM05D001717 ORTHO05D007217 1.4e-10 69.7 67 56.7
TWI34G1733 Tripterygium wilfordii HOM05D001717 ORTHO05D007217 1.4e-10 69.7 83 51.8
Ah.09g228040 Amaranthus hybridus HOM05D001717 ORTHO05D007217 1.9e-10 69.3 81 50.6
CDE05G1519 Ceratophyllum demersum HOM05D001717 ORTHO05D007217 1.9e-10 69.3 67 55.2
FvH4_1g07950 Fragaria vesca HOM05D001717 ORTHO05D007217 1.9e-10 69.3 65 56.9
FAN19G0647 Fragaria x ananassa HOM05D001717 ORTHO05D007217 1.9e-10 69.3 65 56.9
FAN23G2221 Fragaria x ananassa HOM05D001717 ORTHO05D007217 1.9e-10 69.3 65 56.9
FAN28G1754 Fragaria x ananassa HOM05D001717 ORTHO05D007217 1.9e-10 69.3 65 56.9
HPP92_009128 Vanilla planifolia HOM05D001717 ORTHO05D007217 1.9e-10 69.3 67 55.2
EL10Ac8g19172 Beta vulgaris HOM05D001717 ORTHO05D007217 2.4e-10 68.9 83 50.6
Dinv42343 Davidia involucrata HOM05D001717 ORTHO05D007217 2.4e-10 68.9 83 50.6
FAN26G2680 Fragaria x ananassa HOM05D001717 ORTHO05D007217 2.4e-10 68.9 96 44.8
Zm00001eb357090 Zea mays HOM05D001717 ORTHO05D007217 2.4e-10 68.9 67 55.2
CiPaw.04G147700 Carya illinoinensis HOM05D001717 ORTHO05D007217 3.2e-10 68.6 65 56.9
Glyma.04G195633 Glycine max HOM05D001717 ORTHO05D007217 3.2e-10 68.6 65 56.9
SalBow1G4112 Salvia bowleyana HOM05D001717 ORTHO05D007217 3.2e-10 68.6 83 50.6
SGA_v2.0_scaffold21G09418 Striga asiatica HOM05D001717 ORTHO05D007217 3.2e-10 68.6 67 53.7
VMungo1309G2997 Vigna mungo HOM05D001717 ORTHO05D007217 3.2e-10 68.6 81 51.9
CAN.G1583.7 Capsicum annuum HOM05D001717 ORTHO05D007217 4.1e-10 68.2 83 50.6
Medtr2g040060 Medicago truncatula HOM05D001717 ORTHO05D007217 4.1e-10 68.2 65 55.4
RcHm_v2.0_Chr2g0093831 Rosa chinensis HOM05D001717 ORTHO05D007217 4.1e-10 68.2 81 51.9
MSTRG.26445 Avicennia marina HOM05D001717 ORTHO05D007217 5.4e-10 67.8 83 48.2
FAN26G1636 Fragaria x ananassa HOM05D001717 ORTHO05D007217 5.4e-10 67.8 65 55.4
Lsat_1_v5_gn_7_34600 Lactuca sativa HOM05D001717 ORTHO05D007217 5.4e-10 67.8 67 55.2
Phvul.009G230300 Phaseolus vulgaris HOM05D001717 ORTHO05D007217 5.4e-10 67.8 81 51.9
CANSAT37G0002 Cannabis sativa HOM05D001717 ORTHO05D007217 7.1e-10 67.4 81 51.9
Duzib187G0409 Durio zibethinus HOM05D001717 ORTHO05D007217 9.2e-10 67.0 65 55.4
Lj6g0021332 Lotus japonicus HOM05D001717 ORTHO05D007217 9.2e-10 67.0 81 50.6
Peaxi162Scf00498g00430 Petunia axillaris HOM05D001717 ORTHO05D007217 9.2e-10 67.0 67 55.2
Sc18g0002290 Simmondsia chinensis HOM05D001717 ORTHO05D007217 9.2e-10 67.0 83 49.4
PGSC0003DMG400000333 Solanum tuberosum HOM05D001717 ORTHO05D007217 9.2e-10 67.0 67 53.7
Prupe.7G205600 Prunus persica HOM05D001717 ORTHO05D007217 1.2e-09 66.6 81 50.6
ATR0716G023 Amborella trichopoda HOM05D001717 ORTHO05D007217 1.6e-09 66.2 93 40.9
MD02G1083500 Malus domestica HOM05D001717 ORTHO05D007217 1.6e-09 66.2 81 50.6
Solyc12g008980.3 Solanum lycopersicum HOM05D001717 ORTHO05D007217 1.6e-09 66.2 83 49.4
Sopen12g003910 Solanum pennellii HOM05D001717 ORTHO05D007217 1.6e-09 66.2 83 49.4
Aqoxy7G01155 Aquilegia oxysepala HOM05D001717 ORTHO05D007217 2.1e-09 65.9 83 49.4
Os01g0581300 Oryza sativa ssp. japonica HOM05D001717 ORTHO05D007217 2.1e-09 65.9 67 52.2
PSO063G2279 Papaver somniferum HOM05D001717 ORTHO05D007217 2.7e-09 65.5 67 52.2
PSO832G4340 Papaver somniferum HOM05D001717 ORTHO05D007217 2.7e-09 65.5 67 52.2
TPR.G464 Trifolium pratense HOM05D001717 ORTHO05D007217 1.7e-08 62.8 31 87.1
Nn8g38788 Nelumbo nucifera HOM05D001717 ORTHO05D007217 3.0e-08 62.0 47 68.1
Sabra06G0116300 Salix brachista HOM05D001717 ORTHO05D007217 3.0e-08 62.0 60 56.7
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 1.1e-07 60.1 95 43.2
Gorai.001G012900 Gossypium raimondii HOM05D001717 ORTHO05D007217 1.1e-07 60.1 95 43.2
Nitab4.5_0002642g0140 Nicotiana tabacum HOM05D001717 ORTHO05D007217 1.5e-07 59.7 47 66.0
SEGI_30255 Sequoiadendron giganteum HOM05D001717 ORTHO05D007217 1.5e-07 59.7 65 49.2
A01p35160 Brassica napus HOM05D018789 ORTHO05D024506 5.6e-07 57.8 58 55.2
Gohir.A07G012400 Gossypium hirsutum HOM05D001717 ORTHO05D007217 7.3e-07 57.4 95 42.1
AagrBONN_evm.TU.Sc2ySwM_117.346 Anthoceros agrestis HOM05D001717 ORTHO05D007217 2.1e-06 55.8 52 48.1
CSS0031227 Camellia sinensis var. sinensis HOM05D001717 ORTHO05D007217 2.1e-06 55.8 55 50.9
CBR_g31296 Chara braunii HOM05D001717 ORTHO05D007217 3.6e-06 55.1 65 43.1
Pp3c11_14590 Physcomitrium patens HOM05D001717 ORTHO05D007217 3.6e-06 55.1 50 54.0


User provided reference genes

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