Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p11980 Brassica napus HOM05D001365 ORTHO05D001291 9.9e-32 139.8 88 100.0
A02p06690 Brassica napus HOM05D001365 ORTHO05D001291 7.4e-27 123.6 85 90.6
BolC2t07298H Brassica oleracea HOM05D001365 ORTHO05D001291 2.7e-21 105.1 98 74.5
Sp6g21630 Schrenkiella parvula HOM05D001365 ORTHO05D001291 1.1e-19 99.8 95 74.7
AL8G36520 Arabidopsis lyrata HOM05D001365 ORTHO05D001291 2.6e-16 88.6 96 70.8
AT5G59950 Arabidopsis thaliana HOM05D001365 ORTHO05D001291 2.6e-16 88.6 97 70.1
Carub.0008s2050 Capsella rubella HOM05D001365 ORTHO05D001291 4.5e-16 87.8 99 68.7
BraA10t43798Z Brassica rapa HOM05D001365 ORTHO05D001291 1.7e-15 85.9 98 71.4
BcaB08g36207 Brassica carinata HOM05D001365 ORTHO05D001291 2.9e-15 85.1 98 71.4
Thhalv10014531m.g Eutrema salsugineum HOM05D001365 ORTHO05D001291 2.9e-15 85.1 94 67.0
A10p17160 Brassica napus HOM05D001365 ORTHO05D001291 6.5e-15 84.0 95 73.7
C09p52460 Brassica napus HOM05D001365 ORTHO05D001291 6.5e-15 84.0 91 74.7
BcaC04g19651 Brassica carinata HOM05D001365 ORTHO05D001291 1.4e-14 82.8 91 73.6
BolC9t58113H Brassica oleracea HOM05D001365 ORTHO05D001291 1.4e-14 82.8 91 73.6
CARHR273580 Cardamine hirsuta HOM05D001365 ORTHO05D001291 9.4e-14 80.1 105 61.9
Aa31LG1G12080 Aethionema arabicum HOM05D001365 ORTHO05D001291 2.3e-12 75.5 94 62.8
Cpa.g.sc188.9 Carica papaya HOM05D001365 ORTHO05D001291 1.5e-11 72.8 94 46.8
Eucgr.B02389 Eucalyptus grandis HOM05D001365 ORTHO05D001291 6.9e-09 63.9 96 44.8
Glyma.13G334200 Glycine max HOM05D001365 ORTHO05D001291 6.9e-09 63.9 97 62.9
Potri.016G093944 Populus trichocarpa HOM05D001365 ORTHO05D001291 6.9e-09 63.9 96 43.8
Sed0008125 Sechium edule HOM05D001365 ORTHO05D001291 6.9e-09 63.9 94 45.7
Manes.11G133200 Manihot esculenta HOM05D001365 ORTHO05D001291 1.2e-08 63.2 93 54.8
Phvul.L003743 Phaseolus vulgaris HOM05D001365 ORTHO05D001291 1.5e-08 62.8 96 44.8
SGA_v2.0_scaffold80G25729 Striga asiatica HOM05D001365 ORTHO05D001291 1.5e-08 62.8 94 46.8
COL.COLO4_14838 Corchorus olitorius HOM05D001365 ORTHO05D001291 2.6e-08 62.0 93 54.8
Rhsim05G0189500 Rhododendron simsii HOM05D001365 ORTHO05D001291 2.6e-08 62.0 95 61.1
VMungo1080G1188 Vigna mungo HOM05D001365 ORTHO05D001291 2.6e-08 62.0 95 43.2
CsaV3_6G017140 Cucumis sativus L. HOM05D001365 ORTHO05D001291 3.4e-08 61.6 91 48.4
Gohir.D13G233800 Gossypium hirsutum HOM05D001365 ORTHO05D001291 4.5e-08 61.2 92 59.8
TAR369G0298 Trochodendron aralioides HOM05D001365 ORTHO05D001291 4.5e-08 61.2 93 45.2
GSVIVG01025009001 Vitis vinifera HOM05D001365 ORTHO05D001291 4.5e-08 61.2 97 44.3
CAN.G501.13 Capsicum annuum HOM05D001365 ORTHO05D001291 5.9e-08 60.8 92 44.6
Lj1A157T43 Lonicera japonica HOM05D001365 ORTHO05D001291 1.0e-07 60.1 99 55.6
Hund18928 Selenicereus undatus HOM05D001365 ORTHO05D001291 1.0e-07 60.1 94 41.5
arahy.Tifrunner.gnm1.ann1.CV46RI Arachis hypogaea HOM05D001365 ORTHO05D001291 1.3e-07 59.7 99 44.4
CSS0018018 Camellia sinensis var. sinensis HOM05D001365 ORTHO05D001291 1.3e-07 59.7 95 54.7
Glyma.12G064900 Glycine max HOM05D001365 ORTHO05D001291 1.3e-07 59.7 97 47.4
Nn2g10421 Nelumbo nucifera HOM05D001365 ORTHO05D001291 1.3e-07 59.7 93 52.7
Nitab4.5_0000349g0140 Nicotiana tabacum HOM05D001365 ORTHO05D001291 1.3e-07 59.7 92 41.3
Nitab4.5_0000527g0120 Nicotiana tabacum HOM05D001365 ORTHO05D001291 1.3e-07 59.7 92 41.3
Solyc10g086400.2 Solanum lycopersicum HOM05D001365 ORTHO05D001291 1.3e-07 59.7 93 40.9
TWI75G0996 Tripterygium wilfordii HOM05D001365 ORTHO05D001291 1.3e-07 59.7 98 52.0
Thecc.05G042800 Theobroma cacao HOM05D001365 ORTHO05D001291 1.7e-07 59.3 93 55.9
Glyma.11G141500 Glycine max HOM05D001365 ORTHO05D001291 2.2e-07 58.9 97 45.4
Lj2A1057G41 Lonicera japonica HOM05D001365 ORTHO05D001291 2.2e-07 58.9 100 54.0
Lj3g0013964 Lotus japonicus HOM05D001365 ORTHO05D001291 2.2e-07 58.9 101 58.4
Sabra16G0101400 Salix brachista HOM05D001365 ORTHO05D001291 2.2e-07 58.9 96 41.7
Gohir.A13G228200 Gossypium hirsutum HOM05D001365 ORTHO05D001291 2.9e-07 58.5 91 58.2
Gohir.D07G100600 Gossypium hirsutum HOM05D001365 ORTHO05D001291 2.9e-07 58.5 94 58.5
Gorai.001G108500 Gossypium raimondii HOM05D001365 ORTHO05D001291 2.9e-07 58.5 94 60.6
Gorai.013G264600 Gossypium raimondii HOM05D001365 ORTHO05D001291 2.9e-07 58.5 92 59.8
Lj3g0023044 Lotus japonicus HOM05D001365 ORTHO05D001291 2.9e-07 58.5 96 42.7
PGR102G3154 Punica granatum HOM05D001365 ORTHO05D001291 2.9e-07 58.5 102 53.9
COL.COLO4_18470 Corchorus olitorius HOM05D001365 ORTHO05D001291 3.8e-07 58.2 91 62.6
Gohir.A03G039600 Gossypium hirsutum HOM05D001365 ORTHO05D001291 3.8e-07 58.2 95 44.2
Gohir.D03G128500 Gossypium hirsutum HOM05D001365 ORTHO05D001291 3.8e-07 58.2 94 52.1
Gorai.003G135200 Gossypium raimondii HOM05D001365 ORTHO05D001291 3.8e-07 58.2 94 52.1
HanXRQChr06g0175781 Helianthus annuus HOM05D001365 ORTHO05D001291 3.8e-07 58.2 101 43.6
Phvul.011G066000 Phaseolus vulgaris HOM05D001365 ORTHO05D001291 3.8e-07 58.2 84 48.8
Sopen10g035780 Solanum pennellii HOM05D001365 ORTHO05D001291 3.8e-07 58.2 92 41.3
TAR636G0228 Trochodendron aralioides HOM05D001365 ORTHO05D001291 3.8e-07 58.2 96 55.2
Peaxi162Scf00407g00521 Petunia axillaris HOM05D001365 ORTHO05D001291 5.0e-07 57.8 96 41.7
SalBow2G1248 Salvia bowleyana HOM05D001365 ORTHO05D001291 5.0e-07 57.8 99 57.6
PGSC0003DMG402019209 Solanum tuberosum HOM05D001365 ORTHO05D001291 5.0e-07 57.8 93 53.8
arahy.Tifrunner.gnm1.ann1.GS5YLT Arachis hypogaea HOM05D001365 ORTHO05D001291 6.5e-07 57.4 98 55.1
TWI31G0647 Tripterygium wilfordii HOM05D001365 ORTHO05D001291 6.5e-07 57.4 94 52.1
Actinidia26446 Actinidia chinensis HOM05D001365 ORTHO05D001291 8.5e-07 57.0 95 42.1
Duzib168G0023 Durio zibethinus HOM05D001365 ORTHO05D001291 8.5e-07 57.0 94 59.6
Gohir.A07G096200 Gossypium hirsutum HOM05D001365 ORTHO05D001291 8.5e-07 57.0 94 59.6
Gorai.004G004300 Gossypium raimondii HOM05D001365 ORTHO05D001291 8.5e-07 57.0 94 58.5
Nitab4.5_0000610g0070 Nicotiana tabacum HOM05D001365 ORTHO05D001291 8.5e-07 57.0 98 58.2
Hund04989 Selenicereus undatus HOM05D001365 ORTHO05D001291 8.5e-07 57.0 93 43.0
Solyc11g073280.2 Solanum lycopersicum HOM05D001365 ORTHO05D001291 8.5e-07 57.0 98 54.1
Sopen11g030910 Solanum pennellii HOM05D001365 ORTHO05D001291 8.5e-07 57.0 98 52.0
Ciclev10029160m.g Citrus clementina HOM05D001365 ORTHO05D001291 1.1e-06 56.6 99 49.5
Gohir.A08G000177 Gossypium hirsutum HOM05D001365 ORTHO05D001291 1.1e-06 56.6 94 59.6
Nn2g12935 Nelumbo nucifera HOM05D001365 ORTHO05D001291 1.1e-06 56.6 94 55.3
Nitab4.5_0003782g0070 Nicotiana tabacum HOM05D001365 ORTHO05D001291 1.1e-06 56.6 98 55.1
CANSAT54G2283 Cannabis sativa HOM05D001365 ORTHO05D001291 1.4e-06 56.2 104 52.9
FAN21G3131 Fragaria x ananassa HOM05D001365 ORTHO05D001291 1.4e-06 56.2 93 43.0
Prupe.6G081700 Prunus persica HOM05D001365 ORTHO05D001291 1.4e-06 56.2 102 39.2
Thecc.09G325800 Theobroma cacao HOM05D001365 ORTHO05D001291 1.4e-06 56.2 94 60.6
ECA236G4565 Erigeron canadensis HOM05D001365 ORTHO05D001291 1.9e-06 55.8 98 48.0
MD11G1143800 Malus domestica HOM05D001365 ORTHO05D001291 1.9e-06 55.8 109 48.6
Psat7g218080 Pisum sativum HOM05D001365 ORTHO05D001291 1.9e-06 55.8 108 54.6
Lalb_Chr24g0394231 Lupinus albus HOM05D001365 ORTHO05D001291 2.5e-06 55.5 101 45.5
QL01p032964 Quercus lobata HOM05D001365 ORTHO05D001291 2.5e-06 55.5 95 41.1
TAR633G2207 Trochodendron aralioides HOM05D001365 ORTHO05D001291 2.5e-06 55.5 105 55.2
MSTRG.12642 Avicennia marina HOM05D001365 ORTHO05D001291 3.2e-06 55.1 92 56.5
Nitab4.5_0000610g0190 Nicotiana tabacum HOM05D001365 ORTHO05D001291 3.2e-06 55.1 98 55.1
PSO384G1796 Papaver somniferum HOM05D001365 ORTHO05D001291 3.2e-06 55.1 101 46.5
QL08p059030 Quercus lobata HOM05D001365 ORTHO05D001291 3.2e-06 55.1 94 42.6
THA.LOC104827008 Tarenaya hassleriana HOM05D001365 ORTHO05D001291 3.2e-06 55.1 99 43.4
TPR.G10213 Trifolium pratense HOM05D001365 ORTHO05D001291 3.2e-06 55.1 108 51.9
Actinidia33857 Actinidia chinensis HOM05D001365 ORTHO05D001291 4.2e-06 54.7 95 49.5
CiPaw.02G182200 Carya illinoinensis HOM05D001365 ORTHO05D001291 4.2e-06 54.7 97 39.2
Dinv32869 Davidia involucrata HOM05D001365 ORTHO05D001291 4.2e-06 54.7 98 51.0
FAN16G3619 Fragaria x ananassa HOM05D001365 ORTHO05D001291 4.2e-06 54.7 94 41.5
EL10Ac7g15977 Beta vulgaris HOM05D001365 ORTHO05D001291 5.5e-06 54.3 95 40.0
CSS0004312 Camellia sinensis var. sinensis HOM05D001365 ORTHO05D001291 5.5e-06 54.3 117 49.6
ClCG03G001960 Citrullus lanatus HOM05D001365 ORTHO05D001291 5.5e-06 54.3 98 58.2
Lalb_Chr14g0375041 Lupinus albus HOM05D001365 ORTHO05D001291 5.5e-06 54.3 101 48.5
Dinv31434 Davidia involucrata HOM05D001365 ORTHO05D001291 7.2e-06 53.9 95 51.6
Migut.J00347 Erythranthe guttata HOM05D001365 ORTHO05D001291 7.2e-06 53.9 90 42.2
PSO339G4215 Papaver somniferum HOM05D001365 ORTHO05D001291 7.2e-06 53.9 101 44.6
Cc01_g12490 Coffea canephora HOM05D001365 ORTHO05D001291 9.4e-06 53.5 96 53.1
Medtr4g063557 Medicago truncatula HOM05D001365 ORTHO05D001291 9.4e-06 53.5 108 50.9


User provided reference genes

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