Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 9.2e-47 189.9 97 100.0
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.4e-31 139.4 68 100.0
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 3.5e-30 134.8 95 78.9
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 3.5e-30 134.8 95 78.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.9e-30 133.7 95 80.0
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.3e-28 128.3 95 76.8
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 9.9e-25 116.7 95 69.5
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.9e-23 112.5 93 67.7
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 9.3e-23 110.2 95 66.3
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.6e-22 109.4 95 66.3
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 3.5e-22 108.2 95 66.3
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.3e-21 105.5 95 64.2
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.5e-20 102.8 99 62.6
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 3.1e-18 95.1 92 59.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.5e-17 91.3 88 58.0
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.0e-16 90.1 87 58.6
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 1.1e-15 86.7 94 54.3
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.4e-15 86.3 94 54.3
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.4e-15 86.3 99 52.5
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 2.5e-15 85.5 86 58.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 3.2e-15 85.1 86 54.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 3.2e-15 85.1 94 53.2
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 4.2e-15 84.7 94 54.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 4.2e-15 84.7 94 54.3
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 4.2e-15 84.7 94 54.3
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 5.5e-15 84.3 95 53.7
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.5e-15 84.3 86 53.5
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 5.5e-15 84.3 86 57.0
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 7.1e-15 84.0 86 57.0
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 7.1e-15 84.0 99 52.5
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 9.3e-15 83.6 86 53.5
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 9.3e-15 83.6 86 54.7
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 9.3e-15 83.6 86 54.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 9.3e-15 83.6 88 54.5
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.2e-14 83.2 86 54.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.2e-14 83.2 94 51.1
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.2e-14 83.2 94 51.1
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.6e-14 82.8 94 51.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.6e-14 82.8 86 54.7
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.6e-14 82.8 86 54.7
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.1e-14 82.4 95 53.7
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.1e-14 82.4 94 52.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.7e-14 82.0 86 55.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.7e-14 82.0 95 51.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.7e-14 82.0 95 51.6
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.5e-14 81.6 84 56.0
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.5e-14 81.6 86 52.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 4.6e-14 81.3 86 54.7
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 6.0e-14 80.9 99 50.5
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 6.0e-14 80.9 95 50.5
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 7.9e-14 80.5 95 50.5
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 7.9e-14 80.5 86 53.5
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 7.9e-14 80.5 95 50.5
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 7.9e-14 80.5 95 51.6
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 7.9e-14 80.5 94 51.1
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-13 80.1 95 49.5
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-13 80.1 95 50.5
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.0e-13 80.1 86 52.3
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 1.0e-13 80.1 95 52.6
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.3e-13 79.7 99 48.5
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.3e-13 79.7 86 53.5
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.3e-13 79.7 96 50.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.3e-13 79.7 96 50.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.8e-13 79.3 86 51.2
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.8e-13 79.3 95 49.5
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.3e-13 79.0 99 49.5
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.0e-13 78.6 86 52.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.0e-13 78.6 86 51.2
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.0e-13 78.6 88 52.3
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 3.9e-13 78.2 86 53.5
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 3.9e-13 78.2 96 47.9
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 5.1e-13 77.8 86 53.5
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 5.1e-13 77.8 97 50.5
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 5.1e-13 77.8 112 46.4
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 6.7e-13 77.4 86 52.3
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 6.7e-13 77.4 86 51.2
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 8.7e-13 77.0 95 50.5
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 8.7e-13 77.0 99 50.5
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-12 76.6 86 52.3
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.1e-12 76.6 86 52.3
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.9e-12 75.9 86 51.2
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 1.9e-12 75.9 86 52.3
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.9e-12 75.9 86 51.2
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.5e-12 75.5 86 51.2
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 3.3e-12 75.1 91 50.5
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 4.3e-12 74.7 96 44.8
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.3e-12 74.7 86 51.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 4.3e-12 74.7 95 48.4
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 4.3e-12 74.7 86 51.2
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 4.3e-12 74.7 95 47.4
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 5.7e-12 74.3 94 45.7
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 7.4e-12 73.9 86 48.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 9.7e-12 73.6 86 48.8
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-11 73.2 88 48.9
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 3.7e-11 71.6 92 47.8
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.8e-11 71.2 88 47.7
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 8.2e-11 70.5 86 47.7
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 8.2e-11 70.5 89 48.3
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.1e-10 70.1 86 47.7
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.8e-10 69.3 91 47.3
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.1e-10 68.2 82 47.6
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.3e-10 67.8 86 45.3
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 9.0e-10 67.0 98 43.9
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 4.5e-09 64.7 86 45.3
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 6.5e-08 60.8 90 41.1
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.7e-06 55.5 84 40.5


User provided reference genes

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