Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p31350 Brassica napus HOM05D007457 ORTHO05D009435 1.1e-158 563.5 357 100.0
A01p25110 Brassica napus HOM05D007457 ORTHO05D009435 9.3e-137 490.7 407 82.3
BraA01t02422Z Brassica rapa HOM05D007457 ORTHO05D009435 9.3e-137 490.7 407 82.3
BcaC09g49913 Brassica carinata HOM05D007457 ORTHO05D009435 1.5e-134 483.4 377 85.1
BolC1t03073H Brassica oleracea HOM05D007457 ORTHO05D009435 1.2e-131 473.8 385 83.1
BcaB05g22976 Brassica carinata HOM05D007457 ORTHO05D009435 5.5e-129 464.9 407 78.1
Sp5g13150 Schrenkiella parvula HOM05D007457 ORTHO05D009435 7.9e-120 434.5 411 65.7
AT3G48900 Arabidopsis thaliana HOM05D007457 ORTHO05D009435 6.9e-116 421.4 411 61.8
Thhalv10010222m.g Eutrema salsugineum HOM05D007457 ORTHO05D009435 2.9e-114 416.0 411 63.5
CARHR157710 Cardamine hirsuta HOM05D007457 ORTHO05D009435 4.7e-112 408.7 416 69.2
Carub.0005s1507 Capsella rubella HOM05D007457 ORTHO05D009435 8.8e-111 404.4 411 61.3
AL5G28420 Arabidopsis lyrata HOM05D007457 ORTHO05D009435 3.8e-106 389.0 411 59.1
Aa31LG4G17420 Aethionema arabicum HOM05D007457 ORTHO05D009435 1.8e-87 327.0 419 54.2
THA.LOC104798924 Tarenaya hassleriana HOM05D007457 ORTHO05D009435 5.0e-82 308.9 346 52.0
QL09p014483 Quercus lobata HOM05D007457 ORTHO05D009435 2.2e-61 240.4 341 44.0
vmacro06689 Vaccinium macrocarpon HOM05D007457 ORTHO05D009435 1.1e-57 228.0 345 41.7
CSS0002258 Camellia sinensis var. sinensis HOM05D007457 ORTHO05D009435 1.9e-57 227.3 344 40.7
CiPaw.04G070400 Carya illinoinensis HOM05D007457 ORTHO05D009435 2.5e-57 226.9 342 41.2
Lalb_Chr01g0009291 Lupinus albus HOM05D007457 ORTHO05D009435 9.5e-57 224.9 394 37.3
Lj1A996G52 Lonicera japonica HOM05D007457 ORTHO05D009435 2.1e-56 223.8 343 39.9
Lj2g0021879 Lotus japonicus HOM05D007457 ORTHO05D009435 2.8e-56 223.4 386 37.6
Glyma.16G194000 Glycine max HOM05D007457 ORTHO05D009435 1.1e-55 221.5 385 38.2
QL09p029389 Quercus lobata HOM05D007457 ORTHO05D009435 1.1e-55 221.5 365 40.8
SGA_v2.0_scaffold44G16713 Striga asiatica HOM05D007457 ORTHO05D009435 1.1e-55 221.5 350 39.4
Aqoxy7G00371 Aquilegia oxysepala HOM05D007457 ORTHO05D009435 2.3e-55 220.3 400 37.0
Cfa008310 Carpinus fangiana HOM05D007457 ORTHO05D009435 3.1e-55 219.9 342 43.6
arahy.Tifrunner.gnm1.ann1.990F6U Arachis hypogaea HOM05D007457 ORTHO05D009435 1.2e-54 218.0 390 37.2
Rhsim03G0179800 Rhododendron simsii HOM05D007457 ORTHO05D009435 1.2e-54 218.0 337 40.4
PGR142G3430 Punica granatum HOM05D007457 ORTHO05D009435 1.5e-54 217.6 338 43.2
Phvul.004G117400 Phaseolus vulgaris HOM05D007457 ORTHO05D009435 2.0e-54 217.2 386 39.1
arahy.Tifrunner.gnm1.ann1.CU1ASG Arachis hypogaea HOM05D007457 ORTHO05D009435 4.4e-54 216.1 390 37.7
COL.COLO4_14297 Corchorus olitorius HOM05D007457 ORTHO05D009435 5.8e-54 215.7 331 38.1
Thecc.03G175400 Theobroma cacao HOM05D007457 ORTHO05D009435 5.8e-54 215.7 336 38.7
MSTRG.27120 Avicennia marina HOM05D007457 ORTHO05D009435 7.6e-54 215.3 345 38.8
TWI23G1174 Tripterygium wilfordii HOM05D007457 ORTHO05D009435 7.6e-54 215.3 399 38.3
TPR.G10758 Trifolium pratense HOM05D007457 ORTHO05D009435 9.9e-54 214.9 390 37.9
Actinidia32867 Actinidia chinensis HOM05D007457 ORTHO05D009435 1.7e-53 214.2 350 40.9
Ca_27692_v3 Cicer arietinum L. HOM05D007457 ORTHO05D009435 1.7e-53 214.2 384 37.5
Manes.14G026700 Manihot esculenta HOM05D007457 ORTHO05D009435 8.4e-53 211.8 340 39.4
Duzib084G1133 Durio zibethinus HOM05D007457 ORTHO05D009435 7.1e-52 208.8 332 39.8
Eucgr.K00246 Eucalyptus grandis HOM05D007457 ORTHO05D009435 7.1e-52 208.8 335 40.0
Actinidia34104 Actinidia chinensis HOM05D007457 ORTHO05D009435 9.2e-52 208.4 366 38.5
Potri.015G142800 Populus trichocarpa HOM05D007457 ORTHO05D009435 9.2e-52 208.4 334 39.8
Hma1.2p1_2482F.1_g323000 Hydrangea macrophylla HOM05D007457 ORTHO05D009435 1.2e-51 208.0 342 41.5
Cc02_g03100 Coffea canephora HOM05D007457 ORTHO05D009435 2.1e-51 207.2 344 38.7
Psat0s4093g0040 Pisum sativum HOM05D007457 ORTHO05D009435 2.1e-51 207.2 390 36.7
Sed0003153 Sechium edule HOM05D007457 ORTHO05D009435 2.7e-51 206.8 397 36.8
Ciclev10004614m.g Citrus clementina HOM05D007457 ORTHO05D009435 3.5e-51 206.5 336 37.8
Gohir.D09G042000 Gossypium hirsutum HOM05D007457 ORTHO05D009435 6.0e-51 205.7 336 39.3
Gorai.006G048300 Gossypium raimondii HOM05D007457 ORTHO05D009435 7.8e-51 205.3 336 39.0
EL10Ac3g05665 Beta vulgaris HOM05D007457 ORTHO05D009435 1.0e-50 204.9 238 48.7
GSVIVG01010540001 Vitis vinifera HOM05D007457 ORTHO05D009435 1.7e-50 204.1 166 57.8
Gohir.A09G041365 Gossypium hirsutum HOM05D007457 ORTHO05D009435 2.3e-50 203.8 336 39.0
Medtr6g055360 Medicago truncatula HOM05D007457 ORTHO05D009435 3.9e-50 203.0 385 37.4
Dinv28451 Davidia involucrata HOM05D007457 ORTHO05D009435 5.1e-50 202.6 161 60.2
Solyc03g025900.3 Solanum lycopersicum HOM05D007457 ORTHO05D009435 8.6e-50 201.8 340 36.2
TAR629G0903 Trochodendron aralioides HOM05D007457 ORTHO05D009435 8.6e-50 201.8 337 43.3
Hund04734 Selenicereus undatus HOM05D007457 ORTHO05D009435 2.5e-49 200.3 158 60.1
Eucgr.L01882 Eucalyptus grandis HOM05D007457 ORTHO05D009435 5.6e-49 199.1 335 38.8
PGSC0003DMG400014289 Solanum tuberosum HOM05D007457 ORTHO05D009435 5.6e-49 199.1 340 36.8
Peaxi162Scf00915g00040 Petunia axillaris HOM05D007457 ORTHO05D009435 9.6e-49 198.4 328 36.9
Migut.F00351 Erythranthe guttata HOM05D007457 ORTHO05D009435 1.2e-48 198.0 402 34.6
Sopen03g004710 Solanum pennellii HOM05D007457 ORTHO05D009435 1.6e-48 197.6 342 37.4
Haze_13725 Corylus avellana HOM05D007457 ORTHO05D009435 2.1e-48 197.2 387 38.2
DCAR_009359 Daucus carota HOM05D007457 ORTHO05D009435 6.2e-48 195.7 343 37.9
Nitab4.5_0003365g0030 Nicotiana tabacum HOM05D007457 ORTHO05D009435 6.2e-48 195.7 331 36.9
Cpa.g.sc107.42 Carica papaya HOM05D007457 ORTHO05D009435 1.4e-47 194.5 158 58.2
HanXRQChr15g0482951 Helianthus annuus HOM05D007457 ORTHO05D009435 6.9e-47 192.2 148 61.5
Sc13g0008580 Simmondsia chinensis HOM05D007457 ORTHO05D009435 1.2e-46 191.4 229 46.7
Atru.chr1.473 Acer truncatum HOM05D007457 ORTHO05D009435 2.0e-46 190.7 155 57.4
CsaV3_3G017010 Cucumis sativus L. HOM05D007457 ORTHO05D009435 2.0e-46 190.7 392 34.7
Lsat_1_v5_gn_3_64061 Lactuca sativa HOM05D007457 ORTHO05D009435 5.8e-46 189.1 145 61.4
ClCG05G007970 Citrullus lanatus HOM05D007457 ORTHO05D009435 7.6e-46 188.7 412 33.7
Nitab4.5_0000716g0160 Nicotiana tabacum HOM05D007457 ORTHO05D009435 7.6e-46 188.7 345 35.9
ECA234G0644 Erigeron canadensis HOM05D007457 ORTHO05D009435 9.9e-46 188.3 164 53.7
AUR62015996 Chenopodium quinoa HOM05D007457 ORTHO05D009435 4.9e-45 186.0 235 45.5
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 8.4e-45 185.3 153 58.2
CAN.G913.2 Capsicum annuum HOM05D007457 ORTHO05D009435 1.4e-44 184.5 158 55.7
MELO3C006899.2 Cucumis melo HOM05D007457 ORTHO05D009435 1.4e-44 184.5 399 34.8
CDE09G0818 Ceratophyllum demersum HOM05D005332 ORTHO05D006861 4.2e-44 183.0 223 46.6
AUR62021203 Chenopodium quinoa HOM05D007457 ORTHO05D009435 4.2e-44 183.0 235 44.7
MBI17_g34336_MAGBIO Magnolia biondii HOM05D007457 ORTHO05D009435 1.3e-42 177.9 163 56.4
QL09p014434 Quercus lobata HOM05D007457 ORTHO05D009435 3.9e-42 176.4 450 33.3
unitig_747.g21768 Utricularia gibba HOM05D007457 ORTHO05D009435 5.1e-42 176.0 147 54.4
Nn6g33538 Nelumbo nucifera HOM05D007457 ORTHO05D009435 3.6e-40 169.9 143 57.3
PSO478G1701 Papaver somniferum HOM05D007457 ORTHO05D009435 5.3e-39 166.0 164 49.4
Ah.07g207290 Amaranthus hybridus HOM05D007457 ORTHO05D009435 9.0e-39 165.2 169 50.9
Zm00001eb259890 Zea mays HOM05D007457 ORTHO05D009435 2.0e-38 164.1 148 50.7
PSO782G2212 Papaver somniferum HOM05D007457 ORTHO05D009435 2.4e-36 157.1 145 53.1
Phvul.004G117300 Phaseolus vulgaris HOM05D007457 ORTHO05D009435 2.6e-30 137.1 386 31.3
ATR0680G303 Amborella trichopoda HOM05D007457 ORTHO05D009435 5.5e-28 129.4 145 44.8
VMungo0464G0383 Vigna mungo HOM05D007457 ORTHO05D009435 1.2e-27 128.3 210 39.0
Glyma.16G183800 Glycine max HOM05D007457 ORTHO05D009435 1.2e-22 111.7 101 55.4
Glyma.16G190101 Glycine max HOM05D007457 ORTHO05D009435 1.2e-22 111.7 101 55.4
Glyma.16G192666 Glycine max HOM05D007457 ORTHO05D009435 5.8e-22 109.4 76 67.1
SHI13794 Sapria himalayana HOM05D007457 ORTHO05D009435 4.2e-20 103.2 182 36.3
Glyma.16G192500 Glycine max HOM05D007457 ORTHO05D009435 5.1e-18 96.3 64 65.6
Glyma.16G193166 Glycine max HOM05D007457 ORTHO05D009435 6.7e-18 95.9 62 67.7
SalBow4G0576 Salvia bowleyana HOM05D007457 ORTHO05D009435 2.7e-11 73.9 51 62.7
SMO117G0161 Selaginella moellendorffii HOM05D007457 ORTHO05D009435 1.0e-10 72.0 165 30.3


User provided reference genes

Program Settings