Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p26140 Brassica napus HOM05D001429 ORTHO05D012635 2.0e-69 265.8 144 100.0
C02p18860 Brassica napus HOM05D001429 ORTHO05D012635 2.0e-58 229.2 136 91.9
BolC9t59514H Brassica oleracea HOM05D001429 ORTHO05D001420 2.8e-55 218.8 140 87.1
C03p61440 Brassica napus HOM05D001429 ORTHO05D001420 1.4e-54 216.5 142 84.5
C07p18400 Brassica napus HOM05D001429 ORTHO05D001420 2.3e-54 215.7 142 85.2
BolC7t42289H Brassica oleracea HOM05D001429 ORTHO05D001420 3.0e-54 215.3 144 84.7
C05p09840 Brassica napus HOM05D001429 ORTHO05D001420 6.8e-54 214.2 138 86.2
C05p33270 Brassica napus HOM05D001429 ORTHO05D001420 1.7e-52 209.5 138 84.1
BcaC07g42174 Brassica carinata HOM05D001429 ORTHO05D001420 2.2e-52 209.1 142 82.4
C07p17830 Brassica napus HOM05D001429 ORTHO05D001420 4.1e-51 204.9 142 81.0
BcaC04g19353 Brassica carinata HOM05D001429 ORTHO05D001420 6.0e-50 201.1 142 79.6
C05p33450 Brassica napus HOM05D001429 ORTHO05D001420 3.0e-49 198.7 136 81.6
BcaC06g35280 Brassica carinata HOM05D001429 ORTHO05D001420 6.2e-47 191.0 133 82.7
BcaC08g44282 Brassica carinata HOM05D001429 ORTHO05D012635 2.1e-42 176.0 121 82.6
C06p17000 Brassica napus HOM05D001429 ORTHO05D012635 2.1e-42 176.0 121 82.6
BraA08t33265Z Brassica rapa HOM05D001429 ORTHO05D001420 2.9e-36 155.6 147 66.7
BcaB04g18394 Brassica carinata HOM05D001429 ORTHO05D001420 3.5e-34 148.7 130 70.0
A08p12770 Brassica napus HOM05D001429 ORTHO05D001420 1.0e-33 147.1 147 65.3
Sp7g17250 Schrenkiella parvula HOM05D001429 ORTHO05D001420 3.4e-29 132.1 137 65.0
A01p20360 Brassica napus HOM05D001429 ORTHO05D001420 5.8e-29 131.3 140 60.7
BraA01t01966Z Brassica rapa HOM05D001429 ORTHO05D001420 5.8e-29 131.3 140 60.7
BcaC01g00266 Brassica carinata HOM05D001429 ORTHO05D001420 1.4e-27 126.7 138 58.0
BcaC07g38027 Brassica carinata HOM05D001429 ORTHO05D001420 1.6e-26 123.2 141 61.7
BolC8t48417H Brassica oleracea HOM05D001429 ORTHO05D012635 1.6e-26 123.2 141 61.7
BcaNung00142 Brassica carinata HOM05D001429 ORTHO05D001420 3.0e-25 119.0 146 56.8
C06p11470 Brassica napus HOM05D001429 ORTHO05D001420 4.3e-24 115.2 86 80.2
BolC1t02558H Brassica oleracea HOM05D001429 ORTHO05D012635 5.6e-24 114.8 61 100.0
C04p36170 Brassica napus HOM05D001429 ORTHO05D012635 2.8e-23 112.5 61 98.4
BolC6t35521H Brassica oleracea HOM05D001429 ORTHO05D012635 2.8e-23 112.5 68 89.7
C08p52330 Brassica napus HOM05D001429 ORTHO05D012635 3.6e-23 112.1 61 96.7
C07p08360 Brassica napus HOM05D001429 ORTHO05D012635 8.1e-23 110.9 60 98.3
C06p24330 Brassica napus HOM05D001429 ORTHO05D012635 1.1e-22 110.5 61 96.7
BolC3t17215H Brassica oleracea HOM05D001429 ORTHO05D012635 2.4e-22 109.4 61 95.1
BolC5t29725H Brassica oleracea HOM05D001429 ORTHO05D012635 5.2e-22 108.2 62 93.5
BolC2t08027H Brassica oleracea HOM05D001429 ORTHO05D012635 9.0e-22 107.5 61 95.1
BolC5t32068H Brassica oleracea HOM05D001429 ORTHO05D012635 1.2e-21 107.1 86 77.9
BolC7t42351H Brassica oleracea HOM05D001429 ORTHO05D012635 2.0e-21 106.3 61 95.1
BcaC09g50427 Brassica carinata HOM05D001429 ORTHO05D001420 3.4e-21 105.5 143 51.0
BolC1t02503H Brassica oleracea HOM05D001429 ORTHO05D001420 1.3e-20 103.6 144 51.4
C01p25530 Brassica napus HOM05D001429 ORTHO05D001420 1.1e-19 100.5 147 51.0
BcaC02g09824 Brassica carinata HOM05D001429 ORTHO05D012635 1.6e-18 96.7 54 96.3
Aa31LG2G13020 Aethionema arabicum HOM05D001429 ORTHO05D001420 4.3e-16 88.6 172 46.5
Thhalv10025552m.g Eutrema salsugineum HOM05D001429 ORTHO05D001420 4.3e-16 88.6 131 52.7
BolC4t25183H Brassica oleracea HOM05D001429 ORTHO05D012635 3.6e-15 85.5 48 97.9
BolC1t02249H Brassica oleracea HOM05D001429 ORTHO05D012635 8.1e-15 84.3 50 94.0
AL7G37810 Arabidopsis lyrata HOM05D001429 ORTHO05D001420 1.2e-13 80.5 120 54.2
BolC7t41249H Brassica oleracea HOM05D001429 ORTHO05D012635 7.6e-13 77.8 60 78.3
THA.LOC104807920 Tarenaya hassleriana HOM05D001429 ORTHO05D001420 1.4e-11 73.6 135 48.1
THA.LOC104807918 Tarenaya hassleriana HOM05D001429 ORTHO05D001420 7.9e-10 67.8 152 46.7
Carub.0007s2451 Capsella rubella HOM05D001429 ORTHO05D001420 1.3e-09 67.0 130 47.7
TWI60G0908 Tripterygium wilfordii HOM05D001429 ORTHO05D001420 1.9e-08 63.2 158 38.6
CsaV3_6G008690 Cucumis sativus L. HOM05D001429 ORTHO05D001420 2.5e-08 62.8 156 42.3
AT4G16830 Arabidopsis thaliana HOM05D001429 ORTHO05D001420 3.3e-08 62.4 101 51.5
CARHR223450 Cardamine hirsuta HOM05D001429 ORTHO05D001420 5.6e-08 61.6 158 41.8
Ah.12g054140 Amaranthus hybridus HOM05D001429 ORTHO05D001420 9.6e-08 60.8 157 38.2
THA.LOC104807919 Tarenaya hassleriana HOM05D001429 ORTHO05D001420 9.6e-08 60.8 154 45.5
Thhalv10000938m.g Eutrema salsugineum HOM05D001429 ORTHO05D001420 6.2e-07 58.2 153 37.9
Gohir.D08G185100 Gossypium hirsutum HOM05D001429 ORTHO05D001420 8.1e-07 57.8 153 37.3
Gorai.004G194400 Gossypium raimondii HOM05D001429 ORTHO05D001420 8.1e-07 57.8 153 37.3
RcHm_v2.0_Chr7g0204831 Rosa chinensis HOM05D001429 ORTHO05D001420 8.1e-07 57.8 177 38.4
DCAR_025063 Daucus carota HOM05D001429 ORTHO05D001420 2.4e-06 56.2 139 38.1
ClCG06G002440 Citrullus lanatus HOM05D001429 ORTHO05D001420 3.1e-06 55.8 153 40.5
AL7G37100 Arabidopsis lyrata HOM05D001429 ORTHO05D001420 4.0e-06 55.5 124 46.0
Ca_08064_v3 Cicer arietinum L. HOM05D001429 ORTHO05D001420 4.0e-06 55.5 171 34.5
PGR031G0446 Punica granatum HOM05D001429 ORTHO05D001420 4.0e-06 55.5 160 35.6


User provided reference genes

Program Settings