Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 8.1e-67 256.9 128 100.0
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 1.1e-58 229.9 136 87.5
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 9.0e-58 226.9 123 94.3
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 4.5e-57 224.6 138 84.1
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 1.0e-56 223.4 123 92.7
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 5.5e-55 217.6 138 82.6
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 2.8e-51 205.3 155 74.2
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 1.7e-48 196.1 155 71.0
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 3.8e-48 194.9 152 69.7
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 5.0e-48 194.5 153 69.3
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 5.0e-48 194.5 154 70.1
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 2.5e-47 192.2 154 69.5
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 3.2e-47 191.8 144 73.6
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 7.1e-47 190.7 155 67.7
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.6e-46 189.5 155 67.1
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 2.7e-46 188.7 153 68.0
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 7.9e-46 187.2 154 68.2
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 1.3e-45 186.4 153 69.3
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 7.4e-44 180.6 154 66.2
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 1.3e-43 179.9 146 65.8
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 5.0e-40 167.9 154 57.8
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 2.8e-35 152.1 149 55.7
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 8.2e-35 150.6 140 62.9
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 8.2e-35 150.6 140 62.9
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.4e-34 149.1 111 62.2
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 6.9e-34 147.5 147 54.4
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 9.1e-34 147.1 112 63.4
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 1.2e-33 146.7 103 70.9
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 2.6e-33 145.6 111 65.8
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 3.4e-33 145.2 147 53.7
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 4.5e-33 144.8 114 61.4
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 5.9e-33 144.4 156 51.9
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 7.7e-33 144.1 112 64.3
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 1.0e-32 143.7 112 64.3
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 1.0e-32 143.7 114 63.2
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 1.7e-32 142.9 103 68.0
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 2.2e-32 142.5 114 60.5
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 2.2e-32 142.5 98 72.4
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 2.2e-32 142.5 111 61.3
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 2.9e-32 142.1 112 64.3
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 3.8e-32 141.7 111 64.0
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 5.0e-32 141.4 153 49.0
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 5.0e-32 141.4 110 60.9
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 8.5e-32 140.6 149 51.7
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 1.1e-31 140.2 152 51.3
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 1.9e-31 139.4 115 60.0
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 3.2e-31 138.7 71 94.4
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 3.2e-31 138.7 149 51.0
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 3.2e-31 138.7 152 52.6
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 4.2e-31 138.3 160 50.0
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 4.2e-31 138.3 104 69.2
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 7.2e-31 137.5 113 64.6
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 7.2e-31 137.5 117 59.8
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 7.2e-31 137.5 118 59.3
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 1.6e-30 136.3 111 60.4
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 1.6e-30 136.3 155 49.7
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 2.1e-30 136.0 157 50.3
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.7e-30 135.6 111 59.5
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 3.6e-30 135.2 149 49.7
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 3.6e-30 135.2 99 68.7
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 3.6e-30 135.2 116 60.3
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 4.7e-30 134.8 98 66.3
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 4.7e-30 134.8 149 49.7
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 4.7e-30 134.8 113 58.4
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 4.7e-30 134.8 117 59.8
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 6.1e-30 134.4 111 58.6
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 6.1e-30 134.4 110 63.6
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 7.9e-30 134.0 103 63.1
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 7.9e-30 134.0 111 59.5
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 7.9e-30 134.0 114 58.8
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 1.0e-29 133.7 160 49.4
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.0e-29 133.7 112 60.7
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.8e-29 132.9 118 59.3
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 1.8e-29 132.9 114 58.8
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 2.3e-29 132.5 106 61.3
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 3.0e-29 132.1 118 58.5
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 3.9e-29 131.7 106 60.4
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 3.9e-29 131.7 150 51.3
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 6.7e-29 131.0 97 67.0
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 6.7e-29 131.0 113 56.6
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 8.8e-29 130.6 111 64.0
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 8.8e-29 130.6 98 65.3
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 1.1e-28 130.2 112 60.7
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 1.1e-28 130.2 154 48.7
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 1.5e-28 129.8 106 60.4
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 1.5e-28 129.8 110 59.1
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 2.6e-28 129.0 116 59.5
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 4.4e-28 128.3 112 58.0
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 5.7e-28 127.9 117 59.0
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 9.7e-28 127.1 111 57.7
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 9.7e-28 127.1 108 58.3
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 2.2e-27 125.9 111 55.9
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 8.2e-27 124.0 109 59.6
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 1.4e-26 123.2 101 59.4
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 3.1e-26 122.1 94 62.8
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 4.1e-26 121.7 111 55.0
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 4.1e-26 121.7 112 57.1
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 4.1e-26 121.7 119 55.5
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 7.0e-26 120.9 139 51.8
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 7.0e-26 120.9 98 62.2
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 7.0e-26 120.9 141 50.4
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 7.0e-26 120.9 75 70.7
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 7.0e-26 120.9 93 60.2
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 9.1e-26 120.6 113 56.6
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 1.5e-25 119.8 74 71.6
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 1.5e-25 119.8 74 71.6
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 3.8e-24 115.2 146 47.3
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 5.0e-24 114.8 94 63.8
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 6.5e-24 114.4 117 53.0
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 5.5e-23 111.3 97 54.6
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 3.0e-21 105.5 86 57.0
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 1.1e-20 103.6 65 73.8
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 1.3e-19 100.1 82 53.7
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 1.7e-19 99.8 87 56.3
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 2.8e-19 99.0 89 51.7
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.4e-18 96.7 127 43.3
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 4.1e-18 95.1 93 47.3
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 7.7e-17 90.9 82 54.9
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 1.3e-16 90.1 68 55.9
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.8e-11 72.4 57 61.4
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 4.8e-11 71.6 105 41.9
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.4e-10 69.3 68 52.9
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 4.1e-10 68.6 60 63.3
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.6e-09 66.6 68 50.0
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 3.8e-08 62.0 56 46.4
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 2.5e-07 59.3 80 40.0
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 3.2e-07 58.9 73 35.6
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.6e-06 56.6 50 52.0


User provided reference genes

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