Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p09340 Brassica napus HOM05D005790 ORTHO05D007464 5.4e-231 803.9 389 100.0
BolC1t00922H Brassica oleracea HOM05D005790 ORTHO05D007464 5.4e-231 803.9 389 100.0
BraA01t00778Z Brassica rapa HOM05D005790 ORTHO05D007464 1.3e-221 772.7 387 96.9
A01p08300 Brassica napus HOM05D005790 ORTHO05D007464 1.5e-217 759.2 387 95.3
Sp7g27670 Schrenkiella parvula HOM05D005790 ORTHO05D007464 6.9e-202 707.2 387 88.6
Carub.0004s1477 Capsella rubella HOM05D005790 ORTHO05D007464 1.7e-200 702.6 387 87.6
CARHR237760 Cardamine hirsuta HOM05D005790 ORTHO05D007464 2.9e-200 701.8 386 88.1
Thhalv10025433m.g Eutrema salsugineum HOM05D005790 ORTHO05D007464 4.9e-200 701.0 387 87.1
AL7G22390 Arabidopsis lyrata HOM05D005790 ORTHO05D007464 5.7e-196 687.6 387 85.8
AT4G29860 Arabidopsis thaliana HOM05D005790 ORTHO05D007464 4.8e-195 684.5 387 85.8
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 2.8e-150 535.8 386 65.8
GSVIVG01009836001 Vitis vinifera HOM05D005790 ORTHO05D007464 3.6e-150 535.4 384 65.6
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 4.0e-149 531.9 388 66.5
THA.LOC104811397 Tarenaya hassleriana HOM05D005790 ORTHO05D007464 4.9e-147 525.0 380 70.0
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 5.4e-146 521.5 393 64.4
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 1.2e-145 520.4 385 66.2
CiPaw.07G153400 Carya illinoinensis HOM05D005790 ORTHO05D007464 7.8e-145 517.7 389 65.0
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 1.7e-144 516.5 388 63.4
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 1.7e-144 516.5 394 66.2
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 1.7e-144 516.5 389 65.0
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 1.1e-143 513.8 389 62.5
Actinidia37976 Actinidia chinensis HOM05D005790 ORTHO05D007464 1.6e-142 510.0 388 63.7
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 3.6e-142 508.8 388 63.7
Gohir.A06G005800 Gossypium hirsutum HOM05D005790 ORTHO05D007464 4.7e-142 508.4 385 63.9
TWI36G0257 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 4.0e-141 505.4 405 60.7
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 4.0e-141 505.4 404 61.6
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 8.9e-141 504.2 391 62.1
Gorai.010G006000 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.2e-140 503.8 385 63.4
FvH4_2g39120 Fragaria vesca HOM05D005790 ORTHO05D007464 4.4e-140 501.9 384 63.5
Gohir.D06G001600 Gossypium hirsutum HOM05D005790 ORTHO05D007464 5.8e-140 501.5 385 63.4
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.7e-139 500.0 386 61.9
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 1.7e-139 500.0 385 63.1
Ciclev10008674m.g Citrus clementina HOM05D005790 ORTHO05D007464 2.2e-139 499.6 386 63.5
vmacro21704 Vaccinium macrocarpon HOM05D005790 ORTHO05D007464 6.4e-139 498.0 401 60.8
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 8.3e-139 497.7 454 56.8
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 7.0e-138 494.6 390 63.6
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 4.6e-137 491.9 385 60.8
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 6.0e-137 491.5 386 61.1
FAN20G0385 Fragaria x ananassa HOM05D005790 ORTHO05D007464 1.3e-136 490.3 393 61.6
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 3.0e-136 489.2 387 61.0
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 3.9e-136 488.8 387 60.7
PGSC0003DMG400016117 Solanum tuberosum HOM05D005790 ORTHO05D007464 8.6e-136 487.6 390 61.0
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 1.5e-135 486.9 413 57.9
Lsat_1_v5_gn_1_16241 Lactuca sativa HOM05D005790 ORTHO05D007464 2.5e-135 486.1 388 60.1
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 4.3e-135 485.3 389 60.2
Eucgr.J01034 Eucalyptus grandis HOM05D005790 ORTHO05D007464 4.3e-135 485.3 385 62.6
ECA247G0379 Erigeron canadensis HOM05D005790 ORTHO05D007464 5.6e-135 485.0 391 59.6
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 7.3e-135 484.6 392 61.0
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 1.2e-134 483.8 387 59.4
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 2.1e-134 483.0 473 52.9
Sopen11g005650 Solanum pennellii HOM05D005790 ORTHO05D007464 4.7e-134 481.9 390 60.3
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.4e-133 480.3 389 59.6
Solyc11g010910.3 Solanum lycopersicum HOM05D005790 ORTHO05D007464 1.4e-133 480.3 390 60.0
FAN15G2431 Fragaria x ananassa HOM05D005790 ORTHO05D007464 3.1e-133 479.2 424 57.5
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 4.0e-133 478.8 384 60.4
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 3.4e-132 475.7 386 58.8
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 4.4e-132 475.3 390 58.7
EL10Ac1g00445 Beta vulgaris HOM05D005790 ORTHO05D007464 5.8e-132 474.9 392 58.4
FAN20G1847 Fragaria x ananassa HOM05D005790 ORTHO05D007464 5.8e-132 474.9 422 57.3
Sc02g0005160 Simmondsia chinensis HOM05D005790 ORTHO05D007464 5.8e-132 474.9 384 60.2
Aqoxy2G03135 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 7.5e-132 474.6 378 60.3
Cc10_g02010 Coffea canephora HOM05D005790 ORTHO05D007464 1.7e-131 473.4 384 58.6
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 2.9e-131 472.6 384 59.4
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 3.7e-131 472.2 414 58.5
AUR62019151 Chenopodium quinoa HOM05D005790 ORTHO05D007464 3.2e-130 469.2 391 58.8
AUR62014415 Chenopodium quinoa HOM05D005790 ORTHO05D007464 2.1e-129 466.5 410 56.6
MSTRG.18414 Avicennia marina HOM05D005790 ORTHO05D007464 1.7e-128 463.4 384 58.3
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 1.5e-127 460.3 358 64.8
DCAR_017500 Daucus carota HOM05D005790 ORTHO05D007464 9.5e-127 457.6 386 59.8
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 2.8e-126 456.1 357 61.1
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 6.2e-126 454.9 498 50.0
Zm00001eb378230 Zea mays HOM05D005790 ORTHO05D007464 8.3e-123 444.5 383 55.9
ATR0945G002 Amborella trichopoda HOM05D005790 ORTHO05D007464 3.5e-121 439.1 401 53.9
Nn5g29250 Nelumbo nucifera HOM05D005790 ORTHO05D007464 1.7e-120 436.8 372 57.0
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 3.9e-120 435.6 387 58.1
SGA_v2.0_scaffold8G04609 Striga asiatica HOM05D005790 ORTHO05D007464 6.6e-120 434.9 384 55.5
HanXRQChr02g0043921 Helianthus annuus HOM05D005790 ORTHO05D007464 1.1e-119 434.1 370 57.6
Peaxi162Scf00085g00528 Petunia axillaris HOM05D005790 ORTHO05D007464 1.1e-119 434.1 384 57.0
Migut.D00577 Erythranthe guttata HOM05D005790 ORTHO05D007464 2.8e-118 429.5 385 54.8
SHI02412 Sapria himalayana HOM05D005790 ORTHO05D007464 1.1e-117 427.6 387 54.8
Os06g0131100 Oryza sativa ssp. japonica HOM05D005790 ORTHO05D007464 1.3e-115 420.6 382 53.9
unitig_26.g10135 Utricularia gibba HOM05D005790 ORTHO05D007464 1.1e-114 417.5 384 51.8
Atru.BG.234.p Acer truncatum HOM05D005790 ORTHO05D007464 2.1e-113 413.3 383 56.4
Aa31LG4G5850 Aethionema arabicum HOM05D005790 ORTHO05D007464 2.8e-110 402.9 297 71.4
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 4.0e-109 399.1 507 45.6
CsaV3_UNG233270 Cucumis sativus L. HOM05D005790 ORTHO05D007464 1.9e-106 390.2 376 51.9
Lj4A790T66 Lonicera japonica HOM05D005790 ORTHO05D007464 1.9e-103 380.2 309 59.5
Ah.05g171860 Amaranthus hybridus HOM05D005790 ORTHO05D007464 2.2e-91 340.1 331 51.4
FAN27G0896 Fragaria x ananassa HOM05D005790 ORTHO05D007464 7.1e-90 335.1 389 48.3
Mapoly0014s0217 Marchantia polymorpha HOM05D005790 ORTHO05D007464 6.0e-89 332.0 383 42.8
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 2.8e-86 323.2 216 70.8
SMO147G0253 Selaginella moellendorffii HOM05D005790 ORTHO05D007464 1.8e-85 320.5 390 43.3
Aqoxy4G01228 Aquilegia oxysepala HOM05D005790 ORTHO05D007464 1.6e-81 307.4 279 54.8
SalBow1G3128 Salvia bowleyana HOM05D005790 ORTHO05D007464 5.3e-77 292.4 214 62.6
Pp3c20_12860 Physcomitrium patens HOM05D005790 ORTHO05D007464 1.3e-75 287.7 383 39.9
TPR.G30295 Trifolium pratense HOM05D005790 ORTHO05D007464 1.8e-72 277.3 167 73.7
Oeu061776.2 Olea europaea HOM05D005790 ORTHO05D000708 1.2e-68 264.6 356 42.4
Actinidia29793 Actinidia chinensis HOM05D005790 ORTHO05D007464 4.2e-66 256.1 411 42.1
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 1.0e-64 251.5 240 55.0
Nitab4.5_0000402g0120 Nicotiana tabacum HOM05D005790 ORTHO05D007464 3.9e-64 249.6 238 53.4
CDE05G1328 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 6.7e-64 248.8 167 65.3
Hund17229 Selenicereus undatus HOM05D005790 ORTHO05D007464 2.4e-61 240.4 148 70.3
RcHm_v2.0_Chr6g0302231 Rosa chinensis HOM05D005790 ORTHO05D007464 3.6e-57 226.5 252 48.4
CBR_g7976 Chara braunii HOM05D001993 ORTHO05D004040 8.8e-56 221.9 563 28.4
Psat5g014760 Pisum sativum HOM05D005790 ORTHO05D007464 8.8e-56 221.9 139 69.1
MBI09_g08426_MAGBIO Magnolia biondii HOM05D005790 ORTHO05D007464 1.8e-53 214.2 384 37.2
Cpa.g.sc140.27 Carica papaya HOM05D005790 ORTHO05D007464 6.5e-51 205.7 151 62.9
Aa31LG4G5860 Aethionema arabicum HOM05D005790 ORTHO05D007464 8.0e-49 198.7 99 92.9
TWI36G0035 Tripterygium wilfordii HOM05D005790 ORTHO05D007464 6.8e-48 195.7 130 68.5
RcHm_v2.0_Chr4g0408871 Rosa chinensis HOM05D005790 ORTHO05D007464 1.2e-47 194.9 384 35.9
Nitab4.5_0000402g0130 Nicotiana tabacum HOM05D005790 ORTHO05D007464 2.0e-47 194.1 119 73.1
TPR.G30287 Trifolium pratense HOM05D005790 ORTHO05D007464 1.3e-46 191.4 139 64.7
Gorai.010G006300 Gossypium raimondii HOM05D005790 ORTHO05D007464 1.1e-45 188.3 114 74.6
CBR_g24442 Chara braunii HOM05D005790 ORTHO05D007464 1.6e-44 184.5 221 40.3
AagrBONN_evm.TU.Sc2ySwM_369.164 Anthoceros agrestis HOM05D005790 ORTHO05D007464 4.2e-42 176.4 279 38.0
Cre02.g076850 Chlamydomonas reinhardtii HOM05D005790 ORTHO05D007464 4.7e-41 172.9 447 28.4
SEGI_31412 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 4.1e-37 159.8 241 39.8
RcHm_v2.0_Chr6g0302371 Rosa chinensis HOM05D005790 ORTHO05D007464 3.3e-34 150.2 177 47.5
Lj4C790T17 Lonicera japonica HOM05D005790 ORTHO05D007464 2.4e-29 134.0 79 74.7
Cfa025606 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.3e-27 128.3 397 29.7
HPP92_020941 Vanilla planifolia HOM05D005790 ORTHO05D007464 1.7e-27 127.9 122 51.6
MCO14G170 Micromonas commoda HOM05D005790 ORTHO05D007464 7.3e-26 122.5 460 25.2
PRCOL_00000381 Prasinoderma coloniale HOM05D005790 ORTHO05D007832 1.8e-24 117.9 424 26.9
MD15G1017900 Malus domestica HOM05D005790 ORTHO05D007464 2.9e-22 110.5 94 61.7
MD15G1018000 Malus domestica HOM05D005790 ORTHO05D007464 2.9e-22 110.5 94 61.7
RcHm_v2.0_Chr6g0302301 Rosa chinensis HOM05D005790 ORTHO05D007464 8.1e-17 92.4 73 57.5
Cpa.g.sc140.30 Carica papaya HOM05D005790 ORTHO05D007464 1.1e-16 92.0 53 81.1
HPP92_020940 Vanilla planifolia HOM05D005790 ORTHO05D007464 4.0e-16 90.1 105 39.0
TAR625G0591 Trochodendron aralioides HOM05D000460 ORTHO05D000333 2.9e-14 84.0 103 47.6
SEGI_12232 Sequoiadendron giganteum HOM05D005790 ORTHO05D007464 1.9e-13 81.3 59 57.6
Manes.09G127900 Manihot esculenta HOM05D004758 ORTHO05D006063 4.7e-09 66.6 385 24.7
Hma1.2p1_1776F.1_g301940 Hydrangea macrophylla HOM05D005790 ORTHO05D007464 1.1e-08 65.5 53 54.7
Lsat_1_v5_gn_4_78400 Lactuca sativa HOM05D000464 ORTHO05D006292 1.1e-08 65.5 309 22.7
Thecc.05G217400 Theobroma cacao HOM05D004758 ORTHO05D006063 1.1e-08 65.5 383 23.8
Actinidia08754 Actinidia chinensis HOM05D004758 ORTHO05D006063 1.4e-08 65.1 374 23.0
Psat5g117120 Pisum sativum HOM05D000464 ORTHO05D006292 1.4e-08 65.1 308 23.4
TAR629G1181 Trochodendron aralioides HOM05D000464 ORTHO05D006292 1.4e-08 65.1 332 22.9
MELO3C026239.2 Cucumis melo HOM05D000464 ORTHO05D006292 3.1e-08 63.9 310 25.5
CsaV3_1G000870 Cucumis sativus L. HOM05D000464 ORTHO05D006292 3.1e-08 63.9 310 25.5
Gohir.D13G161600 Gossypium hirsutum HOM05D004758 ORTHO05D006063 5.2e-08 63.2 379 23.5
ClCG06G017570 Citrullus lanatus HOM05D000464 ORTHO05D006292 8.9e-08 62.4 303 23.8
CSS0041467 Camellia sinensis var. sinensis HOM05D000464 ORTHO05D000408 1.2e-07 62.0 307 21.8
CDE05G1505 Ceratophyllum demersum HOM05D005790 ORTHO05D007464 1.2e-07 62.0 54 57.4
VMungo0331G1008 Vigna mungo HOM05D005790 ORTHO05D007464 4.4e-07 60.1 49 59.2
Rhsim05G0228200 Rhododendron simsii HOM05D002560 ORTHO05D003782 7.6e-07 59.3 215 23.7
Sabra13G0073200 Salix brachista HOM05D004758 ORTHO05D006063 9.9e-07 58.9 151 27.2
TAR371G0383 Trochodendron aralioides HOM05D000464 ORTHO05D006292 9.9e-07 58.9 144 26.4
Sed0021649 Sechium edule HOM05D005508 ORTHO05D006882 1.3e-06 58.5 300 23.0
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 4.9e-06 56.6 100 30.0
ATR0585G118 Amborella trichopoda HOM05D004386 ORTHO05D005247 6.4e-06 56.2 352 22.4
COL.COLO4_37813 Corchorus olitorius HOM05D004758 ORTHO05D006063 6.4e-06 56.2 366 23.2


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