Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p02440 Brassica napus HOM05D006781 ORTHO05D008500 1.4e-93 346.3 179 100.0
BcaNung04429 Brassica carinata HOM05D006781 ORTHO05D008500 3.7e-57 225.3 174 73.6
BolC7t46605H Brassica oleracea HOM05D006781 ORTHO05D008500 6.9e-56 221.1 165 78.2
A03p64390 Brassica napus HOM05D006781 ORTHO05D008500 2.6e-55 219.2 165 77.0
C07p61830 Brassica napus HOM05D006781 ORTHO05D008500 2.6e-55 219.2 144 81.9
BraA03t15504Z Brassica rapa HOM05D006781 ORTHO05D008500 2.6e-55 219.2 165 77.0
AL7G14360 Arabidopsis lyrata HOM05D006781 ORTHO05D008500 1.0e-54 217.2 123 88.6
AT4G36650 Arabidopsis thaliana HOM05D006781 ORTHO05D008500 1.0e-54 217.2 123 88.6
Carub.0007s0367 Capsella rubella HOM05D006781 ORTHO05D008500 1.0e-54 217.2 126 88.9
CARHR244990 Cardamine hirsuta HOM05D006781 ORTHO05D008500 2.9e-54 215.7 173 70.5
Sp7g34310 Schrenkiella parvula HOM05D006781 ORTHO05D008500 2.5e-53 212.6 124 87.9
Thhalv10024972m.g Eutrema salsugineum HOM05D006781 ORTHO05D008500 1.0e-51 207.2 170 69.4
Aa31LG6G13450 Aethionema arabicum HOM05D006781 ORTHO05D008500 1.3e-51 206.8 127 85.0
Manes.02G092200 Manihot esculenta HOM05D006781 ORTHO05D008500 5.1e-51 204.9 131 79.4
COL.COLO4_22101 Corchorus olitorius HOM05D006781 ORTHO05D008500 1.9e-50 203.0 139 77.7
Thecc.01G038000 Theobroma cacao HOM05D006781 ORTHO05D008500 1.9e-50 203.0 125 83.2
Duzib187G0625 Durio zibethinus HOM05D006781 ORTHO05D008500 2.5e-50 202.6 136 77.9
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 5.7e-50 201.4 107 98.1
Sabra07G0024100 Salix brachista HOM05D006781 ORTHO05D008500 9.7e-50 200.7 136 78.7
Potri.007G027600 Populus trichocarpa HOM05D006781 ORTHO05D008500 1.3e-49 200.3 136 77.9
Gohir.D11G191800 Gossypium hirsutum HOM05D006781 ORTHO05D008500 1.6e-49 199.9 136 78.7
Gorai.007G204500 Gossypium raimondii HOM05D006781 ORTHO05D008500 2.2e-49 199.5 136 78.7
Gohir.A11G185300 Gossypium hirsutum HOM05D006781 ORTHO05D008500 4.8e-49 198.4 136 77.9
RcHm_v2.0_Chr2g0101921 Rosa chinensis HOM05D006781 ORTHO05D008500 1.4e-48 196.8 137 75.9
THA.LOC104807446 Tarenaya hassleriana HOM05D006781 ORTHO05D008500 1.8e-48 196.4 142 73.9
Medtr5g019910 Medicago truncatula HOM05D006781 ORTHO05D008500 5.3e-48 194.9 166 67.5
MELO3C007819.2 Cucumis melo HOM05D006781 ORTHO05D008500 2.0e-47 193.0 137 75.2
CsaV3_6G046160 Cucumis sativus L. HOM05D006781 ORTHO05D008500 2.0e-47 193.0 137 75.2
Lj2g0016513 Lotus japonicus HOM05D006781 ORTHO05D008500 2.0e-47 193.0 140 72.9
Sed0022670 Sechium edule HOM05D006781 ORTHO05D008500 2.0e-47 193.0 137 75.9
AUR62003169 Chenopodium quinoa HOM05D006781 ORTHO05D008500 2.6e-47 192.6 137 75.9
ClCG01G019450 Citrullus lanatus HOM05D006781 ORTHO05D008500 2.6e-47 192.6 137 75.2
Migut.H01003 Erythranthe guttata HOM05D006781 ORTHO05D008500 2.6e-47 192.6 172 64.5
SGA_v2.0_scaffold276G46640 Striga asiatica HOM05D006781 ORTHO05D008500 2.6e-47 192.6 137 72.3
TPR.G28685 Trifolium pratense HOM05D006781 ORTHO05D008500 2.6e-47 192.6 123 80.5
FAN23G0683 Fragaria x ananassa HOM05D006781 ORTHO05D008500 3.4e-47 192.2 123 81.3
Psat2g160720 Pisum sativum HOM05D006781 ORTHO05D008500 3.4e-47 192.2 147 70.1
FvH4_1g13530 Fragaria vesca HOM05D006781 ORTHO05D008500 4.5e-47 191.8 127 79.5
FAN19G3094 Fragaria x ananassa HOM05D006781 ORTHO05D008500 4.5e-47 191.8 127 79.5
Lj4A199T79 Lonicera japonica HOM05D006781 ORTHO05D008500 5.9e-47 191.4 126 79.4
Lsat_1_v5_gn_4_150821 Lactuca sativa HOM05D006781 ORTHO05D008500 1.0e-46 190.7 123 80.5
Oeu024876.1 Olea europaea HOM05D006781 ORTHO05D008500 1.0e-46 190.7 136 77.2
Ciclev10025402m.g Citrus clementina HOM05D006781 ORTHO05D008500 1.3e-46 190.3 138 71.7
TAR628G1576 Trochodendron aralioides HOM05D006781 ORTHO05D008500 1.3e-46 190.3 144 72.2
TAR628G1642 Trochodendron aralioides HOM05D006781 ORTHO05D008500 1.3e-46 190.3 144 72.2
VMungo1215G2776 Vigna mungo HOM05D006781 ORTHO05D008500 1.7e-46 189.9 137 73.7
AUR62007987 Chenopodium quinoa HOM05D006781 ORTHO05D008500 2.2e-46 189.5 137 74.5
Lalb_Chr09g0322521 Lupinus albus HOM05D006781 ORTHO05D008500 2.9e-46 189.1 144 70.8
Phvul.002G028900 Phaseolus vulgaris HOM05D006781 ORTHO05D008500 3.8e-46 188.7 137 73.0
HanXRQChr02g0054021 Helianthus annuus HOM05D006781 ORTHO05D008500 5.0e-46 188.3 137 73.7
SalBow1G4613 Salvia bowleyana HOM05D006781 ORTHO05D008500 5.0e-46 188.3 136 75.0
unitig_52.g17586 Utricularia gibba HOM05D006781 ORTHO05D008500 8.5e-46 187.6 122 79.5
SHI22874 Sapria himalayana HOM05D006781 ORTHO05D008500 1.1e-45 187.2 136 72.8
arahy.Tifrunner.gnm1.ann1.IS0T5T Arachis hypogaea HOM05D006781 ORTHO05D008500 1.4e-45 186.8 147 70.7
arahy.Tifrunner.gnm1.ann1.WUH8B9 Arachis hypogaea HOM05D006781 ORTHO05D008500 1.9e-45 186.4 146 70.5
Prupe.7G152500 Prunus persica HOM05D006781 ORTHO05D008500 1.9e-45 186.4 125 79.2
PGR102G0302 Punica granatum HOM05D006781 ORTHO05D008500 2.5e-45 186.0 131 76.3
Cpa.g.sc544.3 Carica papaya HOM05D006781 ORTHO05D008500 4.2e-45 185.3 131 74.8
QL06p045633 Quercus lobata HOM05D006781 ORTHO05D008500 4.2e-45 185.3 133 73.7
CANSAT01G0093 Cannabis sativa HOM05D006781 ORTHO05D008500 5.5e-45 184.9 129 77.5
ECA232G4265 Erigeron canadensis HOM05D000595 ORTHO05D001274 7.2e-45 184.5 152 67.8
MSTRG.23537 Avicennia marina HOM05D006781 ORTHO05D008500 2.1e-44 183.0 146 69.9
Rhsim08G0114100 Rhododendron simsii HOM05D006781 ORTHO05D008500 2.1e-44 183.0 126 76.2
Haze_15109 Corylus avellana HOM05D006781 ORTHO05D008500 2.7e-44 182.6 140 72.9
TWI73G0565 Tripterygium wilfordii HOM05D006781 ORTHO05D008500 2.7e-44 182.6 125 78.4
Cfa004291 Carpinus fangiana HOM05D006781 ORTHO05D008500 4.6e-44 181.8 140 72.1
FAN28G1912 Fragaria x ananassa HOM05D006781 ORTHO05D008500 4.6e-44 181.8 143 70.6
CSS0005063 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 7.9e-44 181.0 123 78.0
CSS0044143 Camellia sinensis var. sinensis HOM05D006781 ORTHO05D008500 7.9e-44 181.0 123 78.0
Cc07_g09330 Coffea canephora HOM05D006781 ORTHO05D008500 7.9e-44 181.0 152 67.8
Glyma.11G066900 Glycine max HOM05D006781 ORTHO05D008500 1.0e-43 180.6 140 69.3
Glyma.01G174900 Glycine max HOM05D006781 ORTHO05D008500 1.4e-43 180.3 139 69.1
Atru.chr3.553 Acer truncatum HOM05D006781 ORTHO05D008500 1.8e-43 179.9 131 74.0
Eucgr.H01265 Eucalyptus grandis HOM05D006781 ORTHO05D008500 3.0e-43 179.1 155 68.4
Solyc02g085470.3 Solanum lycopersicum HOM05D006781 ORTHO05D008500 3.9e-43 178.7 123 74.8
Sopen02g030150 Solanum pennellii HOM05D006781 ORTHO05D008500 3.9e-43 178.7 123 74.8
DCAR_017258 Daucus carota HOM05D006781 ORTHO05D008500 5.1e-43 178.3 124 78.2
Nn1g08488 Nelumbo nucifera HOM05D006781 ORTHO05D008500 6.7e-43 177.9 130 73.8
CiPaw.02G016000 Carya illinoinensis HOM05D006781 ORTHO05D008500 8.8e-43 177.6 138 70.3
MD15G1265100 Malus domestica HOM05D006781 ORTHO05D008500 1.1e-42 177.2 167 62.3
PGSC0003DMG400014907 Solanum tuberosum HOM05D006781 ORTHO05D008500 1.1e-42 177.2 123 74.8
Hund14146 Selenicereus undatus HOM05D006781 ORTHO05D008500 1.5e-42 176.8 128 74.2
EL10Ac6g14931 Beta vulgaris HOM05D006781 ORTHO05D008500 2.0e-42 176.4 136 71.3
PSO541G3113 Papaver somniferum HOM05D006781 ORTHO05D008500 4.3e-42 175.3 123 74.8
GSVIVG01018985001 Vitis vinifera HOM05D006781 ORTHO05D008500 5.7e-42 174.9 123 77.2
Dinv26821 Davidia involucrata HOM05D006781 ORTHO05D008500 1.3e-41 173.7 127 72.4
Ah.03g139450 Amaranthus hybridus HOM05D006781 ORTHO05D008500 4.8e-41 171.8 139 69.8
Aqoxy6G01071 Aquilegia oxysepala HOM05D006781 ORTHO05D008500 6.3e-41 171.4 126 72.2
CDE04G3347 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 8.2e-41 171.0 131 71.0
MBI16_g37743_MAGBIO Magnolia biondii HOM05D006781 ORTHO05D008500 1.1e-40 170.6 134 72.4
Nitab4.5_0000434g0010 Nicotiana tabacum HOM05D006781 ORTHO05D008500 1.1e-40 170.6 124 73.4
Nitab4.5_0001827g0050 Nicotiana tabacum HOM05D006781 ORTHO05D008500 1.1e-40 170.6 124 73.4
HPP92_024892 Vanilla planifolia HOM05D006781 ORTHO05D008500 1.1e-40 170.6 159 60.4
Sc18g0003010 Simmondsia chinensis HOM05D006781 ORTHO05D008500 1.8e-40 169.9 137 67.9
CAN.G358.110 Capsicum annuum HOM05D006781 ORTHO05D008500 3.1e-40 169.1 138 68.8
CDE02G0088 Ceratophyllum demersum HOM05D006781 ORTHO05D008500 3.1e-40 169.1 131 70.2
Zm00001eb401050 Zea mays HOM05D006781 ORTHO05D008500 7.2e-37 157.9 141 63.1
Peaxi162Scf00515g00425 Petunia axillaris HOM05D006781 ORTHO05D008500 6.1e-36 154.8 119 70.6
Zm00001eb221630 Zea mays HOM05D006781 ORTHO05D008500 2.8e-33 146.0 170 54.1
Zm00001eb093700 Zea mays HOM05D006781 ORTHO05D008500 3.7e-33 145.6 141 61.0
SEGI_35841 Sequoiadendron giganteum HOM05D006781 ORTHO05D008500 2.0e-31 139.8 162 51.9
Zm00001eb025920 Zea mays HOM05D006781 ORTHO05D008500 2.6e-31 139.4 141 58.9
ATR0733G081 Amborella trichopoda HOM05D006781 ORTHO05D008500 3.5e-31 139.0 145 57.2
SMO351G0206 Selaginella moellendorffii HOM05D006781 ORTHO05D008500 2.2e-30 136.3 176 46.6
AagrBONN_evm.TU.Sc2ySwM_228.123 Anthoceros agrestis HOM05D006781 ORTHO05D008500 1.5e-29 133.7 136 56.6
Mapoly0029s0042 Marchantia polymorpha HOM05D006781 ORTHO05D008500 2.3e-27 126.3 130 52.3
Actinidia19175 Actinidia chinensis HOM05D006781 ORTHO05D008500 5.7e-26 121.7 123 56.9
vmacro17849 Vaccinium macrocarpon HOM05D006781 ORTHO05D008500 9.7e-26 120.9 76 84.2
Dinv39967 Davidia involucrata HOM05D006781 ORTHO05D008500 6.1e-20 101.7 80 66.2
Zm00001eb203540 Zea mays HOM05D006781 ORTHO05D008500 1.8e-16 90.1 57 82.5
BcaC08g43565 Brassica carinata HOM05D000551 ORTHO05D001750 8.8e-11 71.2 59 66.1


User provided reference genes

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