Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t39252H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-45 184.9 89 100.0
BraA01t01996Z Brassica rapa HOM05D001239 ORTHO05D040948 2.2e-23 112.1 82 61.0
BcaC08g43073 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-22 109.4 86 54.7
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 7.2e-22 107.1 89 58.4
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 8.8e-20 100.1 87 52.9
BraA01t02071Z Brassica rapa HOM05D001239 ORTHO05D000925 6.1e-13 77.4 89 46.1
BcaC06g32580 Brassica carinata HOM05D000003 ORTHO05D000925 1.8e-12 75.9 83 45.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 6.8e-12 73.9 83 42.2
BcaB07g31656 Brassica carinata HOM05D000003 ORTHO05D000925 1.2e-11 73.2 81 45.7
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-11 72.8 75 46.7
BcaC03g17500 Brassica carinata HOM05D001239 ORTHO05D000925 5.7e-11 70.9 83 44.6
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 5.7e-11 70.9 85 42.4
C08p02000 Brassica napus HOM05D001906 ORTHO05D002083 9.8e-11 70.1 87 46.0
BcaB02g07087 Brassica carinata HOM05D000003 ORTHO05D000925 1.7e-10 69.3 86 41.9
BolC8t46998H Brassica oleracea HOM05D001906 ORTHO05D002083 2.8e-10 68.6 87 44.8
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-10 67.4 85 41.2
BolC6t35354H Brassica oleracea HOM05D001239 ORTHO05D000925 6.3e-10 67.4 83 39.8
BolC9t54624H Brassica oleracea HOM05D001239 ORTHO05D000925 6.3e-10 67.4 91 38.5
BcaB06g26311 Brassica carinata HOM05D001239 ORTHO05D000925 8.3e-10 67.0 82 40.2
C03p39150 Brassica napus HOM05D001239 ORTHO05D000925 1.4e-09 66.2 83 43.4
CARHR034120 Cardamine hirsuta HOM05D001239 ORTHO05D000925 2.4e-09 65.5 88 38.6
SpUn0002_0230 Schrenkiella parvula HOM05D000003 ORTHO05D000925 2.4e-09 65.5 84 46.4
BcaC01g03544 Brassica carinata HOM05D001239 ORTHO05D000925 3.1e-09 65.1 85 37.6
BolC4t27530H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-09 65.1 83 38.6
AT2G06845 Arabidopsis thaliana HOM05D012104 ORTHO05D016576 4.1e-09 64.7 52 55.8
BolC4t26908H Brassica oleracea HOM05D001239 ORTHO05D000925 4.1e-09 64.7 86 36.0
BolC6t37188H Brassica oleracea HOM05D000003 ORTHO05D000925 4.1e-09 64.7 85 36.5
BraA02t09347Z Brassica rapa HOM05D000003 ORTHO05D000925 4.1e-09 64.7 82 40.2
BraA08t32601Z Brassica rapa HOM05D000003 ORTHO05D000925 4.1e-09 64.7 85 35.3
BcaC03g13498 Brassica carinata HOM05D001239 ORTHO05D000925 5.4e-09 64.3 92 40.2
BcaC03g17630 Brassica carinata HOM05D001239 ORTHO05D000925 5.4e-09 64.3 82 37.8
BcaC08g46106 Brassica carinata HOM05D001239 ORTHO05D000925 5.4e-09 64.3 82 37.8
C06p09750 Brassica napus HOM05D001239 ORTHO05D000925 7.0e-09 63.9 75 36.0
BraA01t03685Z Brassica rapa HOM05D001239 ORTHO05D000925 9.2e-09 63.5 89 37.1
AT1G10000 Arabidopsis thaliana HOM05D001239 ORTHO05D000925 2.0e-08 62.4 91 37.4
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-08 62.4 87 41.4
Thhalv10028075m.g Eutrema salsugineum HOM05D000003 ORTHO05D000925 2.0e-08 62.4 82 36.6
BcaB05g24950 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-08 62.0 83 38.6
BcaC01g01193 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-08 62.0 82 36.6
BraA02t08308Z Brassica rapa HOM05D001239 ORTHO05D000925 2.7e-08 62.0 81 38.3
BcaC07g36999 Brassica carinata HOM05D001239 ORTHO05D000925 4.5e-08 61.2 89 43.8
Sp7g02710 Schrenkiella parvula HOM05D000003 ORTHO05D000925 4.5e-08 61.2 50 48.0
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 5.9e-08 60.8 91 35.2
BcaB07g30263 Brassica carinata HOM05D001239 ORTHO05D000925 7.8e-08 60.5 50 50.0
BcaNung04285 Brassica carinata HOM05D001239 ORTHO05D000925 7.8e-08 60.5 68 50.0
BolC5t29150H Brassica oleracea HOM05D001239 ORTHO05D000925 7.8e-08 60.5 93 35.5
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 7.8e-08 60.5 88 35.2
BraA07t30152Z Brassica rapa HOM05D001239 ORTHO05D000925 7.8e-08 60.5 78 39.7
Thhalv10017605m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.8e-08 60.5 83 36.1
BcaC01g05560 Brassica carinata HOM05D001239 ORTHO05D000925 1.3e-07 59.7 82 35.4
BolC4t23405H Brassica oleracea HOM05D001239 ORTHO05D000925 1.3e-07 59.7 75 32.0
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 1.7e-07 59.3 88 36.4
BcaC02g10519 Brassica carinata HOM05D001239 ORTHO05D000925 2.3e-07 58.9 62 43.5
BolC8t49469H Brassica oleracea HOM05D001239 ORTHO05D000925 2.3e-07 58.9 87 35.6
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 2.3e-07 58.9 88 33.0
BcaC01g03824 Brassica carinata HOM05D001239 ORTHO05D000925 2.9e-07 58.5 82 39.0
BcaC09g51021 Brassica carinata HOM05D000022 ORTHO05D000071 2.9e-07 58.5 78 41.0
AL1G62100 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 3.9e-07 58.2 85 37.6
BraA05t22331Z Brassica rapa HOM05D001239 ORTHO05D000925 3.9e-07 58.2 57 42.1
BcaB04g18173 Brassica carinata HOM05D001239 ORTHO05D000925 5.0e-07 57.8 88 35.2
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 5.0e-07 57.8 91 34.1
BcaC03g15774 Brassica carinata HOM05D001239 ORTHO05D000925 5.0e-07 57.8 82 34.1
CARHR077050 Cardamine hirsuta HOM05D001239 ORTHO05D000925 5.0e-07 57.8 89 33.7
BcaB01g02457 Brassica carinata HOM05D001239 ORTHO05D000925 6.6e-07 57.4 86 38.4
BolC6t35926H Brassica oleracea HOM05D001239 ORTHO05D000925 6.6e-07 57.4 86 36.0
CARHR114650 Cardamine hirsuta HOM05D001239 ORTHO05D000925 6.6e-07 57.4 56 41.1
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 8.6e-07 57.0 85 36.5
BcaC05g28721 Brassica carinata HOM05D000003 ORTHO05D000925 8.6e-07 57.0 85 38.8
BcaC08g47031 Brassica carinata HOM05D001239 ORTHO05D000925 8.6e-07 57.0 82 34.1
Thhalv10011157m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 8.6e-07 57.0 50 44.0
BcaC07g39980 Brassica carinata HOM05D001239 ORTHO05D000925 1.1e-06 56.6 82 35.4
BraA01t00649Z Brassica rapa HOM05D001239 ORTHO05D000925 1.1e-06 56.6 47 46.8
BraA10t43182Z Brassica rapa HOM05D001239 ORTHO05D000925 1.1e-06 56.6 53 45.3
BcaB01g00882 Brassica carinata HOM05D000003 ORTHO05D000925 1.5e-06 56.2 75 40.0
BcaC01g02475 Brassica carinata HOM05D000003 ORTHO05D000004 1.5e-06 56.2 88 33.0
BcaC04g19170 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-06 56.2 91 34.1
BolC2t07957H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-06 56.2 82 32.9
BcaB06g29335 Brassica carinata HOM05D001239 ORTHO05D000925 1.9e-06 55.8 93 35.5
BraA02t04989Z Brassica rapa HOM05D000003 ORTHO05D000925 1.9e-06 55.8 88 33.0
AL3G41770 Arabidopsis lyrata HOM05D000003 ORTHO05D000925 2.5e-06 55.5 59 37.3
BcaB01g03708 Brassica carinata HOM05D001239 ORTHO05D000925 2.5e-06 55.5 73 38.4
BolC3t15189H Brassica oleracea HOM05D001239 ORTHO05D000925 2.5e-06 55.5 85 37.6
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 2.5e-06 55.5 83 36.1
BraA07t30121Z Brassica rapa HOM05D001239 ORTHO05D000925 2.5e-06 55.5 83 33.7
BcaC07g42703 Brassica carinata HOM05D001239 ORTHO05D000925 3.3e-06 55.1 86 33.7
BcaC09g50004 Brassica carinata HOM05D001239 ORTHO05D000925 3.3e-06 55.1 88 36.4
BraA03t13198Z Brassica rapa HOM05D001239 ORTHO05D000925 3.3e-06 55.1 49 46.9
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 3.3e-06 55.1 89 36.0
AL9U10020 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 4.3e-06 54.7 89 38.2
BcaB05g25306 Brassica carinata HOM05D000003 ORTHO05D000925 4.3e-06 54.7 95 36.8
BcaC05g29080 Brassica carinata HOM05D000003 ORTHO05D000925 4.3e-06 54.7 86 34.9
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 4.3e-06 54.7 82 37.8
BcaC02g06989 Brassica carinata HOM05D001239 ORTHO05D000925 5.6e-06 54.3 86 34.9
BcaC09g49678 Brassica carinata HOM05D001239 ORTHO05D000925 5.6e-06 54.3 91 33.0
BolC3t20759H Brassica oleracea HOM05D001239 ORTHO05D000925 5.6e-06 54.3 86 34.9
C06p32260 Brassica napus HOM05D001239 ORTHO05D000925 7.3e-06 53.9 88 33.0
BolC6t38349H Brassica oleracea HOM05D000152 ORTHO05D000609 7.3e-06 53.9 88 33.0
CARHR153540 Cardamine hirsuta HOM05D001239 ORTHO05D000925 7.3e-06 53.9 85 34.1
Thhalv10000670m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.3e-06 53.9 49 42.9
Thhalv10011015m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 7.3e-06 53.9 93 32.3
BcaB02g07049 Brassica carinata HOM05D000152 ORTHO05D000609 9.5e-06 53.5 63 38.1


User provided reference genes

Program Settings