Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28028 Brassica carinata HOM05D004187 ORTHO05D004890 4.3e-92 341.3 169 100.0
C05p40440 Brassica napus HOM05D004187 ORTHO05D004890 4.3e-92 341.3 169 100.0
BolC5t32785H Brassica oleracea HOM05D004187 ORTHO05D004890 4.3e-92 341.3 169 100.0
BcaB06g26379 Brassica carinata HOM05D004187 ORTHO05D004890 3.3e-84 315.1 169 92.3
BraA05t21487Z Brassica rapa HOM05D004187 ORTHO05D004890 1.4e-82 309.7 170 92.4
A05p26020 Brassica napus HOM05D004187 ORTHO05D004890 2.4e-82 308.9 170 91.8
Sp3g20440 Schrenkiella parvula HOM05D004187 ORTHO05D004890 1.1e-71 273.5 169 81.1
A03p42920 Brassica napus HOM05D004187 ORTHO05D004890 2.6e-68 262.3 162 78.4
BraA03t13436Z Brassica rapa HOM05D004187 ORTHO05D004890 2.6e-68 262.3 162 78.4
BcaC01g03429 Brassica carinata HOM05D004187 ORTHO05D004890 4.4e-68 261.5 162 79.0
BcaC01g03430 Brassica carinata HOM05D004187 ORTHO05D004890 4.4e-68 261.5 162 79.0
C03p52670 Brassica napus HOM05D004187 ORTHO05D004890 4.4e-68 261.5 162 79.0
BolC3t17535H Brassica oleracea HOM05D004187 ORTHO05D004890 4.4e-68 261.5 162 79.0
Carub.0003s2284 Capsella rubella HOM05D004187 ORTHO05D004890 9.4e-63 243.8 164 73.2
Thhalv10021679m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.4e-61 240.0 158 76.6
AL3G36980 Arabidopsis lyrata HOM05D004187 ORTHO05D004890 1.5e-60 236.5 174 68.4
AT3G22680 Arabidopsis thaliana HOM05D004187 ORTHO05D004890 2.2e-59 232.6 164 70.1
CARHR098560 Cardamine hirsuta HOM05D004187 ORTHO05D004890 7.0e-58 227.6 163 68.7
Thhalv10017318m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 8.3e-51 204.1 167 65.9
Thhalv10029384m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 3.1e-50 202.2 157 69.4
Aa31LG3G2350 Aethionema arabicum HOM05D004187 ORTHO05D004890 4.5e-49 198.4 156 63.5
THA.LOC104803042 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 2.2e-48 196.1 161 59.6
MBI11_g32998_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 6.5e-48 194.5 161 58.4
Rhsim04G0199500 Rhododendron simsii HOM05D004187 ORTHO05D004890 6.5e-48 194.5 157 60.5
Gohir.A10G118400 Gossypium hirsutum HOM05D004187 ORTHO05D004890 5.5e-47 191.4 150 57.3
Eucgr.H03428 Eucalyptus grandis HOM05D004187 ORTHO05D004890 1.2e-46 190.3 161 57.1
Dinv25939 Davidia involucrata HOM05D004187 ORTHO05D004890 4.7e-46 188.3 132 63.6
Gorai.011G165600 Gossypium raimondii HOM05D004187 ORTHO05D004890 4.7e-46 188.3 150 56.7
Gohir.D10G148300 Gossypium hirsutum HOM05D004187 ORTHO05D004890 6.1e-46 188.0 150 57.3
Potri.008G155800 Populus trichocarpa HOM05D004187 ORTHO05D004890 8.0e-46 187.6 161 55.9
Actinidia40129 Actinidia chinensis HOM05D004187 ORTHO05D004890 3.0e-45 185.7 166 51.8
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 3.0e-45 185.7 161 58.4
RcHm_v2.0_Chr4g0407591 Rosa chinensis HOM05D004187 ORTHO05D004890 3.0e-45 185.7 155 58.1
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 3.0e-45 185.7 145 56.6
MD16G1197500 Malus domestica HOM05D004187 ORTHO05D004890 5.2e-45 184.9 161 56.5
TAR362G0393 Trochodendron aralioides HOM05D004187 ORTHO05D004890 5.2e-45 184.9 161 56.5
FvH4_5g32450 Fragaria vesca HOM05D004187 ORTHO05D004890 1.2e-44 183.7 158 55.7
FAN18G3642 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.2e-44 183.7 158 55.7
Nn1g02390 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.2e-44 183.7 157 57.3
FvH4_4g00760 Fragaria vesca HOM05D004187 ORTHO05D004890 1.5e-44 183.3 158 55.7
FAN12G2319 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.5e-44 183.3 158 55.7
Nitab4.5_0000050g0260 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.5e-44 183.3 161 55.3
TWI73G1209 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 1.5e-44 183.3 166 54.8
Haze_11210 Corylus avellana HOM05D004187 ORTHO05D004890 2.0e-44 183.0 191 49.7
Duzib212G0360 Durio zibethinus HOM05D004187 ORTHO05D004890 2.0e-44 183.0 143 56.6
FAN22G0369 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.0e-44 183.0 159 56.0
Cfa008463 Carpinus fangiana HOM05D004187 ORTHO05D004890 5.7e-44 181.4 191 48.7
Sopen10g014270 Solanum pennellii HOM05D004187 ORTHO05D004890 7.5e-44 181.0 161 56.5
CsaV3_3G013040 Cucumis sativus L. HOM05D004187 ORTHO05D004890 2.2e-43 179.5 160 56.9
Rhsim02G0027200 Rhododendron simsii HOM05D004187 ORTHO05D004890 2.2e-43 179.5 170 52.9
SalBow2G2347 Salvia bowleyana HOM05D004187 ORTHO05D004890 2.2e-43 179.5 155 58.1
THA.LOC104808564 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 2.2e-43 179.5 164 53.7
MELO3C006513.2 Cucumis melo HOM05D004187 ORTHO05D004890 2.8e-43 179.1 160 56.2
FAN13G2545 Fragaria x ananassa HOM05D004187 ORTHO05D004890 2.8e-43 179.1 158 54.4
Sed0024336 Sechium edule HOM05D004187 ORTHO05D004890 2.8e-43 179.1 159 57.2
TWI53G1349 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 2.8e-43 179.1 165 57.0
Medtr5g006610 Medicago truncatula HOM05D004187 ORTHO05D004890 3.7e-43 178.7 164 56.7
QL06p001566 Quercus lobata HOM05D004187 ORTHO05D004890 3.7e-43 178.7 167 55.7
CiPaw.02G122700 Carya illinoinensis HOM05D004187 ORTHO05D004890 6.3e-43 177.9 181 49.2
Manes.15G031200 Manihot esculenta HOM05D004187 ORTHO05D004890 6.3e-43 177.9 161 54.0
Sabra08G0118600 Salix brachista HOM05D004187 ORTHO05D004890 6.3e-43 177.9 161 54.0
PGSC0003DMG401028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 6.3e-43 177.9 161 55.9
MSTRG.4047 Avicennia marina HOM05D004187 ORTHO05D004890 8.3e-43 177.6 155 54.8
VMungo0251G0090 Vigna mungo HOM05D004187 ORTHO05D004890 8.3e-43 177.6 123 64.2
CANSAT78G1519 Cannabis sativa HOM05D004187 ORTHO05D004890 1.4e-42 176.8 162 50.0
vmacro15360 Vaccinium macrocarpon HOM05D004187 ORTHO05D004890 1.8e-42 176.4 156 52.6
Ca_24413_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.4e-42 176.0 120 65.0
Lj3A731T58 Lonicera japonica HOM05D004187 ORTHO05D004890 3.1e-42 175.6 155 54.8
SalBow2G0844 Salvia bowleyana HOM05D004187 ORTHO05D004890 3.1e-42 175.6 155 57.4
CSS0045006 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 4.1e-42 175.3 132 58.3
Sed0012407 Sechium edule HOM05D004187 ORTHO05D004890 4.1e-42 175.3 160 57.5
Phvul.002G043400 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 7.0e-42 174.5 124 62.1
PGR129G0008 Punica granatum HOM05D004187 ORTHO05D004890 7.0e-42 174.5 159 56.0
PGR142G1722 Punica granatum HOM05D004187 ORTHO05D004890 7.0e-42 174.5 159 56.0
Aqoxy2G03437 Aquilegia oxysepala HOM05D004187 ORTHO05D004890 9.1e-42 174.1 159 52.2
Lalb_Chr05g0211101 Lupinus albus HOM05D004187 ORTHO05D004890 9.1e-42 174.1 132 60.6
COL.COLO4_21526 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.2e-41 173.7 112 67.9
GSVIVG01018017001 Vitis vinifera HOM05D004187 ORTHO05D004890 1.2e-41 173.7 160 52.5
Nitab4.5_0001792g0010 Nicotiana tabacum HOM05D004187 ORTHO05D004890 2.0e-41 172.9 116 64.7
Manes.03G175300 Manihot esculenta HOM05D004187 ORTHO05D004890 3.5e-41 172.2 160 55.6
arahy.Tifrunner.gnm1.ann1.8FXP11 Arachis hypogaea HOM05D004187 ORTHO05D004890 4.5e-41 171.8 159 53.5
ClCG05G004990 Citrullus lanatus HOM05D004187 ORTHO05D004890 4.5e-41 171.8 160 54.4
Ciclev10005993m.g Citrus clementina HOM05D004187 ORTHO05D004890 4.5e-41 171.8 157 52.2
arahy.Tifrunner.gnm1.ann1.Q4QH0F Arachis hypogaea HOM05D004187 ORTHO05D004890 5.9e-41 171.4 160 52.5
CSS0034976 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 1.0e-40 170.6 154 51.9
Glyma.01G235900 Glycine max HOM05D004187 ORTHO05D004890 1.0e-40 170.6 155 52.3
Hma1.2p1_0207F.1_g088010 Hydrangea macrophylla HOM05D004187 ORTHO05D004890 1.0e-40 170.6 157 53.5
LjContig00408g0013113 Lotus japonicus HOM05D004187 ORTHO05D004890 1.0e-40 170.6 123 62.6
TPR.G37887 Trifolium pratense HOM05D004187 ORTHO05D004890 1.0e-40 170.6 123 61.8
arahy.Tifrunner.gnm1.ann1.LSRC2Y Arachis hypogaea HOM05D004187 ORTHO05D004890 2.9e-40 169.1 160 51.9
arahy.Tifrunner.gnm1.ann1.Q6C7EF Arachis hypogaea HOM05D004187 ORTHO05D004890 2.9e-40 169.1 155 53.5
AUR62001090 Chenopodium quinoa HOM05D004187 ORTHO05D004890 2.9e-40 169.1 164 51.2
Psat2g190440 Pisum sativum HOM05D004187 ORTHO05D004890 5.0e-40 168.3 120 60.8
PGSC0003DMG402028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.5e-39 166.8 116 66.4
Atru.chr4.2392 Acer truncatum HOM05D004187 ORTHO05D004890 1.9e-39 166.4 124 59.7
Medtr5g006600 Medicago truncatula HOM05D004187 ORTHO05D004890 1.9e-39 166.4 120 60.8
Sc19g0004030 Simmondsia chinensis HOM05D004187 ORTHO05D004890 4.2e-39 165.2 157 52.2
TPR.G37866 Trifolium pratense HOM05D004187 ORTHO05D004890 5.5e-39 164.9 135 56.3
Atru.chr4.2417 Acer truncatum HOM05D004187 ORTHO05D004890 9.5e-39 164.1 161 50.3
FAN08G0419 Fragaria x ananassa HOM05D004187 ORTHO05D004890 9.5e-39 164.1 119 59.7
Ca_24412_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.2e-38 163.7 138 53.6
Ca_30960_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.2e-38 163.7 138 53.6
Solyc10g045190.3 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.1e-38 162.9 116 64.7
Cc10_g08560 Coffea canephora HOM05D004187 ORTHO05D004890 3.6e-38 162.2 159 50.3
Glyma.11G007300 Glycine max HOM05D004187 ORTHO05D004890 4.7e-38 161.8 116 59.5
HPP92_009615 Vanilla planifolia HOM05D004187 ORTHO05D004890 4.7e-38 161.8 150 53.3
PGSC0003DMG400039476 Solanum tuberosum HOM05D004187 ORTHO05D004890 8.0e-38 161.0 116 61.2
Nitab4.5_0001547g0030 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.4e-37 160.2 158 51.3
AUR62008916 Chenopodium quinoa HOM05D004187 ORTHO05D004890 4.0e-37 158.7 162 49.4
TAR633G0827 Trochodendron aralioides HOM05D004187 ORTHO05D004890 4.0e-37 158.7 124 55.6
Nitab4.5_0000085g0360 Nicotiana tabacum HOM05D004187 ORTHO05D004890 5.2e-37 158.3 158 50.6
SGA_v2.0_scaffold191G40487 Striga asiatica HOM05D004187 ORTHO05D004890 8.9e-37 157.5 123 59.3
Psat2g190480 Pisum sativum HOM05D004187 ORTHO05D004890 1.2e-36 157.1 123 55.3
DCAR_031726 Daucus carota HOM05D004187 ORTHO05D004890 2.0e-36 156.4 153 50.3
Dinv03045 Davidia involucrata HOM05D004187 ORTHO05D004890 2.6e-36 156.0 124 52.4
CDE07G0031 Ceratophyllum demersum HOM05D004187 ORTHO05D004890 7.5e-36 154.5 159 50.3
Actinidia32414 Actinidia chinensis HOM05D004187 ORTHO05D004890 9.8e-36 154.1 125 54.4
Migut.G00365 Erythranthe guttata HOM05D004187 ORTHO05D004890 1.3e-35 153.7 124 55.6
Peaxi162Scf00092g00016 Petunia axillaris HOM05D004187 ORTHO05D004890 1.3e-35 153.7 121 57.0
CAN.G1402.3 Capsicum annuum HOM05D004187 ORTHO05D004890 1.7e-35 153.3 123 56.1
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 1.7e-35 153.3 127 54.3
HanXRQChr08g0219391 Helianthus annuus HOM05D004187 ORTHO05D004890 8.3e-35 151.0 162 48.8
ECA233G0410 Erigeron canadensis HOM05D004187 ORTHO05D004890 1.4e-34 150.2 166 46.4
PSO210G5857 Papaver somniferum HOM05D004187 ORTHO05D004890 1.8e-34 149.8 117 54.7
Solyc09g082480.2 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.8e-34 149.8 130 51.5
ATR0665G390 Amborella trichopoda HOM05D004187 ORTHO05D004890 3.1e-34 149.1 159 45.3
Rhsim03G0003800 Rhododendron simsii HOM05D004187 ORTHO05D004890 3.1e-34 149.1 121 53.7
ECA247G1582 Erigeron canadensis HOM05D004187 ORTHO05D004890 4.1e-34 148.7 127 52.8
PSO170G4884 Papaver somniferum HOM05D004187 ORTHO05D004890 4.1e-34 148.7 117 54.7
PGSC0003DMG400040737 Solanum tuberosum HOM05D004187 ORTHO05D004890 9.2e-34 147.5 112 58.9
Sopen09g031340 Solanum pennellii HOM05D004187 ORTHO05D004890 2.7e-33 146.0 128 51.6
Peaxi162Scf00245g00106 Petunia axillaris HOM05D004187 ORTHO05D004890 3.5e-33 145.6 145 49.7
Lsat_1_v5_gn_8_21341 Lactuca sativa HOM05D004187 ORTHO05D004890 2.5e-31 139.4 116 52.6
unitig_22.g6822 Utricularia gibba HOM05D004187 ORTHO05D004890 4.3e-31 138.7 152 44.7
PGSC0003DMG400039782 Solanum tuberosum HOM05D004187 ORTHO05D004890 7.3e-31 137.9 103 59.2
QL08p059729 Quercus lobata HOM05D004187 ORTHO05D004890 3.6e-30 135.6 141 43.3
Cfa001472 Carpinus fangiana HOM05D004187 ORTHO05D004890 4.7e-30 135.2 132 47.0
Potri.008G076500 Populus trichocarpa HOM05D004187 ORTHO05D004890 1.0e-29 134.0 124 51.6
AUR62001087 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.8e-29 133.3 172 44.8
Haze_17068 Corylus avellana HOM05D004187 ORTHO05D004890 1.8e-29 133.3 160 42.5
RcHm_v2.0_Chr1g0367131 Rosa chinensis HOM05D004187 ORTHO05D004890 5.2e-29 131.7 138 44.9
Prupe.2G235500 Prunus persica HOM05D004187 ORTHO05D004890 6.8e-29 131.3 114 48.2
Sopen09g031300 Solanum pennellii HOM05D004187 ORTHO05D004890 1.2e-28 130.6 114 52.6
Atru.chr1.2916 Acer truncatum HOM05D004187 ORTHO05D004890 1.4e-26 123.6 113 46.9
Atru.chr7.913 Acer truncatum HOM05D004187 ORTHO05D004890 4.6e-25 118.6 114 45.6
COL.COLO4_15044 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.0e-24 117.5 119 48.7
Manes.12G002301 Manihot esculenta HOM05D004187 ORTHO05D004890 1.0e-24 117.5 110 50.9
Sopen09g031290 Solanum pennellii HOM05D004187 ORTHO05D004890 1.0e-24 117.5 95 54.7
Lj1g0009372 Lotus japonicus HOM05D004187 ORTHO05D004890 3.0e-24 115.9 123 44.7
Lj1g0019332 Lotus japonicus HOM05D004187 ORTHO05D004890 3.0e-24 115.9 123 44.7
VMungo1383G1788 Vigna mungo HOM05D004187 ORTHO05D004890 3.9e-24 115.5 127 41.7
Duzib114G0324 Durio zibethinus HOM05D004187 ORTHO05D004890 1.5e-23 113.6 112 47.3
Solyc09g082420.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 3.3e-23 112.5 88 56.8
Solyc09g082430.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 5.6e-23 111.7 95 54.7
Atru.chr1.2920 Acer truncatum HOM05D004187 ORTHO05D004890 1.6e-22 110.2 114 44.7
Lalb_Chr10g0091621 Lupinus albus HOM05D004187 ORTHO05D004890 1.6e-22 110.2 118 44.1
Phvul.008G010500 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 4.7e-22 108.6 119 42.0
PGSC0003DMG400032269 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.4e-21 107.1 84 57.1
Lj1g0011366 Lotus japonicus HOM05D004187 ORTHO05D004890 2.3e-21 106.3 123 40.7
Ca_12246_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 1.2e-20 104.0 107 44.9
Nn6g35138 Nelumbo nucifera HOM05D004187 ORTHO05D004890 4.4e-20 102.1 109 45.0
PGSC0003DMG400013771 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.3e-19 100.5 74 62.2
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 2.4e-18 96.3 142 40.1
Solyc09g082440.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 2.4e-18 96.3 73 58.9
BcaB03g14654 Brassica carinata HOM05D004187 ORTHO05D004890 8.6e-16 87.8 76 57.9
Lalb_Chr16g0376451 Lupinus albus HOM05D004187 ORTHO05D004890 4.7e-14 82.0 74 52.7
PGSC0003DMG400032265 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.8e-13 80.1 68 51.5
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 9.9e-12 74.3 123 34.1
Sabra10G0059200 Salix brachista HOM05D004187 ORTHO05D004890 8.3e-11 71.2 65 47.7
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.1e-07 60.8 111 34.2
Zm00001eb275620 Zea mays HOM05D004187 ORTHO05D004890 2.5e-07 59.7 84 40.5
Potri.010G083751 Populus trichocarpa HOM05D004187 ORTHO05D004890 5.6e-07 58.5 42 57.1


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