Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.9e-164 582.4 294 100.0
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.9e-164 582.4 294 100.0
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.9e-164 582.4 294 100.0
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.3e-164 581.3 294 99.7
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.3e-164 581.3 294 99.7
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 1.3e-160 569.7 294 97.6
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 5.7e-156 554.3 294 94.2
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.8e-154 549.3 294 93.2
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 3.1e-154 548.5 294 93.5
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 6.9e-154 547.4 294 93.5
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 9.0e-154 547.0 294 93.2
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 1.0e-152 543.5 294 92.9
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.7e-152 542.7 294 91.8
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 3.7e-147 525.0 294 88.1
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 3.7e-147 525.0 294 88.1
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 8.2e-147 523.9 294 88.4
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.4e-146 523.1 294 88.4
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.8e-146 522.7 294 87.4
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 5.3e-146 521.2 294 87.4
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.0e-145 519.2 294 87.1
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 2.2e-144 515.8 294 87.4
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 8.5e-144 513.8 294 86.7
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.9e-143 512.7 294 86.1
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 3.2e-143 511.9 294 86.4
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 1.2e-142 510.0 294 85.7
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 1.6e-142 509.6 294 85.7
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.6e-142 509.6 294 86.4
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 2.1e-142 509.2 294 85.7
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 7.9e-142 507.3 293 84.3
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.4e-141 506.5 291 87.3
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.0e-140 502.7 294 84.4
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 2.0e-140 502.7 294 84.7
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 7.4e-140 500.7 292 83.2
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 1.3e-139 500.0 291 84.2
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.2e-139 499.2 291 82.5
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.2e-139 499.2 292 82.9
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.2e-139 499.2 289 84.1
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.8e-139 498.8 291 83.2
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.4e-138 495.7 290 83.1
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 2.0e-137 492.7 290 82.1
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 5.9e-137 491.1 291 81.1
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.9e-136 488.8 289 82.7
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 6.5e-136 487.6 289 80.3
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 1.1e-135 486.9 289 80.6
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 3.2e-135 485.3 290 80.7
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 9.4e-135 483.8 289 79.9
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 4.7e-134 481.5 290 80.7
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 7.9e-134 480.7 293 78.8
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 7.9e-134 480.7 291 80.8
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.0e-133 480.3 289 79.9
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 2.3e-133 479.2 291 80.4
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 2.3e-133 479.2 289 80.6
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 3.0e-133 478.8 290 80.3
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.0e-133 478.8 292 80.1
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.0e-133 478.8 292 80.1
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 3.0e-133 478.8 294 80.3
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 80.6
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.0e-132 476.1 290 79.7
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 3.3e-132 475.3 292 79.8
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 3.3e-132 475.3 289 80.6
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 5.7e-132 474.6 289 79.6
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 7.4e-132 474.2 294 78.6
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 7.4e-132 474.2 289 78.2
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 1.3e-131 473.4 290 79.7
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.7e-131 473.0 291 79.4
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 2.8e-131 472.2 291 79.4
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 79.9
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 3.7e-131 471.9 289 79.9
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 6.3e-131 471.1 297 77.8
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 77.5
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 1.4e-130 469.9 290 80.0
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 1.4e-130 469.9 290 79.3
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.4e-130 469.9 289 78.5
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 3.1e-130 468.8 289 77.5
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.1e-130 468.8 289 78.2
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 3.1e-130 468.8 288 78.5
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 5.3e-130 468.0 289 78.9
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.2e-129 466.8 293 77.5
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 1.6e-129 466.5 288 77.1
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 2.0e-129 466.1 306 74.5
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.0e-129 466.1 289 77.2
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 78.2
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 4.5e-129 464.9 293 77.8
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 5.9e-129 464.5 289 78.2
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 5.9e-129 464.5 306 76.8
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.3e-128 463.4 289 77.2
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.7e-128 463.0 288 76.0
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 2.2e-128 462.6 289 77.9
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 2.2e-128 462.6 289 77.2
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 2.9e-128 462.2 288 76.4
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 3.8e-128 461.8 290 78.3
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 5.0e-128 461.5 325 72.3
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 8.5e-128 460.7 291 77.7
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.5e-127 459.9 290 77.9
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 3.2e-127 458.8 294 76.2
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 9.4e-127 457.2 290 77.6
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 1.2e-126 456.8 294 75.2
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 1.2e-126 456.8 288 75.7
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 3.6e-126 455.3 289 74.7
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 8.0e-126 454.1 290 77.9
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 1.0e-125 453.8 291 75.3
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.8e-125 453.0 286 75.9
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.3e-125 452.6 289 76.1
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 5.2e-125 451.4 288 74.7
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 6.7e-125 451.1 289 75.1
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.1e-124 450.3 289 73.7
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 7.5e-124 447.6 289 73.7
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 1.7e-123 446.4 292 75.0
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 6.3e-123 444.5 293 74.1
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 1.1e-122 443.7 291 74.9
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.4e-122 443.4 286 73.8
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 1.8e-122 443.0 309 70.9
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 1.8e-122 443.0 290 75.5
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 5.3e-122 441.4 295 73.6
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.1e-122 440.7 292 75.3
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 2.7e-121 439.1 292 75.7
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 7.7e-121 437.6 291 74.2
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 1.3e-120 436.8 289 72.3
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 2.1e-118 429.5 309 69.6
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 2.7e-118 429.1 305 70.8
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 4.7e-118 428.3 271 76.8
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.4e-117 426.8 260 80.8
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 3.0e-117 425.6 294 70.1
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.3e-115 420.2 296 69.3
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.2e-115 419.5 296 69.3
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 6.3e-115 417.9 293 70.0
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 6.3e-115 417.9 447 52.8
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 2.4e-114 416.0 288 70.1
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 3.1e-114 415.6 302 70.9
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 5.4e-114 414.8 288 70.5
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.9e-112 409.1 291 72.2
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 6.5e-112 407.9 309 67.3
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 4.0e-109 398.7 255 73.3
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 8.8e-109 397.5 231 82.7
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 2.0e-108 396.4 295 67.5
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.2e-107 392.9 289 65.7
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 2.8e-107 392.5 257 72.8
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.6e-105 386.7 295 66.8
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 5.9e-105 384.8 289 64.0
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.3e-104 383.6 289 63.0
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 1.7e-104 383.3 234 79.9
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 6.6e-104 381.3 289 63.7
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 8.3e-99 364.4 231 75.3
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.2e-94 350.5 297 62.6
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 8.9e-93 344.4 294 57.8
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 1.3e-80 303.9 285 54.7
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.3e-80 303.1 203 72.9
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.3e-80 303.1 270 60.4
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.0e-76 290.0 287 50.9
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 4.3e-71 272.3 289 48.1
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 4.4e-68 262.3 286 46.5
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 2.9e-67 259.6 282 46.1
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 5.1e-64 248.8 163 73.0
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 1.5e-55 220.7 154 67.5
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 4.8e-54 215.7 151 73.5
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 1.8e-53 213.8 113 90.3
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.7e-49 199.9 127 77.2
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 1.1e-23 114.8 124 50.0
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 9.7e-23 111.7 82 67.1
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 2.8e-22 110.2 82 68.3
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 9.1e-21 105.1 82 65.9
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 1.5e-20 104.4 74 67.6
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 2.6e-20 103.6 161 39.8
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 1.0e-19 101.7 61 78.7
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.0e-19 101.7 82 64.6
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 3.8e-19 99.8 65 75.4
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.2e-17 94.7 144 43.8
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.0e-16 91.7 57 73.7
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.4e-16 91.3 70 64.3
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.1e-13 81.6 58 63.8
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.1e-13 81.6 58 63.8
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.1e-10 71.6 54 68.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 7.5e-07 58.9 65 53.8
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.3e-06 58.2 38 73.7


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