Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06017 Brassica carinata HOM05D004156 ORTHO05D005259 6.0e-42 173.7 85 100.0
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 5.1e-41 170.6 83 98.8
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 5.1e-41 170.6 83 98.8
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 1.5e-40 169.1 83 97.6
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 1.3e-39 166.0 83 96.4
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 92.8
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 92.8
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 92.8
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 92.8
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 92.8
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 1.2e-37 159.5 83 89.2
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 3.4e-37 157.9 83 91.6
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 7.6e-37 156.8 83 89.2
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 2.2e-36 155.2 82 87.8
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 2.9e-36 154.8 86 90.7
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 1.1e-35 152.9 83 88.0
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 5.4e-35 150.6 82 84.1
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 3.5e-34 147.9 82 85.4
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 6.0e-34 147.1 82 81.7
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 3.0e-33 144.8 83 80.7
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 8.7e-33 143.3 83 80.7
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 7.4e-32 140.2 77 88.3
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.4e-29 131.3 83 73.5
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.4e-29 131.3 83 73.5
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 3.4e-29 131.3 82 78.0
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 5.8e-29 130.6 83 72.3
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 5.8e-29 130.6 83 72.3
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 9.9e-29 129.8 83 72.3
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 9.9e-29 129.8 83 72.3
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 2.9e-28 128.3 83 71.1
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.8e-28 127.9 86 70.9
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 3.8e-28 127.9 81 72.8
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 4.9e-28 127.5 80 75.0
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 4.9e-28 127.5 81 74.1
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 8.4e-28 126.7 82 67.1
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.4e-27 125.9 79 77.2
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 1.9e-27 125.6 79 73.4
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 2.4e-27 125.2 78 71.8
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 2.4e-27 125.2 81 74.1
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 3.2e-27 124.8 82 67.1
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 5.5e-27 124.0 81 70.4
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 9.3e-27 123.2 77 75.3
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 2.1e-26 122.1 82 67.1
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 2.1e-26 122.1 80 70.0
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 2.7e-26 121.7 76 72.4
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 3.5e-26 121.3 84 67.9
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 3.5e-26 121.3 81 67.9
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 3.5e-26 121.3 79 72.2
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 4.6e-26 120.9 82 70.7
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 4.6e-26 120.9 73 78.1
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 6.0e-26 120.6 73 78.1
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 6.0e-26 120.6 82 65.9
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 6.0e-26 120.6 73 78.1
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 1.3e-25 119.4 82 63.4
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 1.3e-25 119.4 81 66.7
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 1.8e-25 119.0 77 71.4
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 1.8e-25 119.0 77 70.1
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 1.8e-25 119.0 73 76.7
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 2.3e-25 118.6 81 65.4
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 2.3e-25 118.6 83 68.7
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 3.0e-25 118.2 81 65.4
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 3.0e-25 118.2 80 67.5
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.0e-25 118.2 83 67.5
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 3.9e-25 117.9 79 69.6
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 3.9e-25 117.9 79 67.1
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 5.1e-25 117.5 78 67.9
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 6.7e-25 117.1 75 70.7
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 6.7e-25 117.1 74 71.6
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 8.7e-25 116.7 79 68.4
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 1.1e-24 116.3 81 66.7
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.5e-24 115.9 81 66.7
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.9e-24 115.5 83 68.7
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 2.5e-24 115.2 77 70.1
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 3.3e-24 114.8 73 74.0
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 3.3e-24 114.8 73 69.9
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 4.3e-24 114.4 76 69.7
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 5.6e-24 114.0 81 66.7
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 5.6e-24 114.0 83 69.9
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 7.4e-24 113.6 84 70.2
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 7.4e-24 113.6 73 72.6
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 9.6e-24 113.2 81 65.4
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 1.3e-23 112.8 78 66.7
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 1.3e-23 112.8 73 67.1
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 2.1e-23 112.1 82 64.6
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 2.8e-23 111.7 73 67.1
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 2.8e-23 111.7 84 63.1
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 6.2e-23 110.5 82 65.9
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-23 110.5 82 65.9
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-23 110.5 82 65.9
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-23 110.5 82 65.9
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.2e-23 110.5 82 65.9
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 8.2e-23 110.2 83 61.4
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.1e-22 109.8 81 63.0
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 1.1e-22 109.8 73 65.8
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 2.4e-22 108.6 78 65.4
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 2.4e-22 108.6 82 67.1
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 4.0e-22 107.8 73 65.8
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 5.3e-22 107.5 75 60.0
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 6.9e-22 107.1 73 64.4
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 1.2e-21 106.3 81 61.7
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 1.2e-21 106.3 84 61.9
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 1.2e-21 106.3 73 64.4
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 1.2e-21 106.3 79 60.8
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 1.2e-21 106.3 81 64.2
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 1.5e-21 105.9 76 63.2
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 2.0e-21 105.5 82 63.4
Nn8g39426 Nelumbo nucifera HOM05D004156 ORTHO05D005259 3.4e-21 104.8 70 68.6
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 4.5e-21 104.4 86 59.3
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 5.8e-21 104.0 84 59.5
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 7.6e-21 103.6 75 60.0
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 7.6e-21 103.6 84 66.7
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 1.0e-20 103.2 75 65.3
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 1.3e-20 102.8 81 61.7
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 1.7e-20 102.4 73 63.0
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 2.2e-20 102.1 100 53.0
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 2.9e-20 101.7 73 60.3
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 2.9e-20 101.7 81 55.6
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 8.4e-20 100.1 84 57.1
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 1.9e-19 99.0 82 54.9
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 2.5e-19 98.6 75 58.7
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 2.5e-19 98.6 81 56.8
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 3.2e-19 98.2 84 57.1
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 5.5e-19 97.4 73 60.3
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 7.1e-19 97.1 75 56.0
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 2.1e-18 95.5 81 53.1
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 2.1e-18 95.5 72 61.1
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.7e-18 95.1 105 51.4
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 6.0e-18 94.0 74 58.1
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 6.0e-18 94.0 75 57.3
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 1.3e-17 92.8 73 60.3
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 1.3e-17 92.8 73 60.3
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 8.7e-17 90.1 99 48.5
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 8.7e-17 90.1 65 67.7
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 2.8e-15 85.1 68 61.8
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 2.6e-13 78.6 58 65.5
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 2.2e-12 75.5 50 72.0
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 6.5e-12 73.9 73 52.1
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 8.5e-12 73.6 73 49.3
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 4.2e-11 71.2 79 44.3
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 4.6e-10 67.8 36 83.3
Zm00001eb060690 Zea mays HOM05D004156 ORTHO05D005259 2.3e-09 65.5 56 51.8
Zm00001eb433790 Zea mays HOM05D003078 ORTHO05D446193 2.3e-09 65.5 56 51.8
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 3.0e-09 65.1 32 93.8
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 6.3e-07 57.4 79 43.0
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 6.3e-07 57.4 73 43.8
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 1.1e-06 56.6 45 55.6
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 1.8e-06 55.8 76 42.1


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