Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 4.9e-241 837.4 433 100.0
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.9e-222 774.6 433 92.4
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 6.7e-222 773.9 433 92.6
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 2.4e-219 765.4 433 92.1
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 5.9e-218 760.8 433 91.5
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 1.0e-217 760.0 458 87.6
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 1.3e-201 706.4 437 84.2
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 8.0e-199 697.2 438 83.1
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.4e-198 696.4 434 82.7
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.0e-197 692.6 433 81.1
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 9.7e-197 690.3 433 81.5
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 3.7e-196 688.3 433 81.1
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 2.3e-177 625.9 441 74.8
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 1.2e-149 533.9 464 62.1
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.1e-114 416.8 475 48.6
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 1.2e-106 391.0 469 47.8
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.6e-106 390.6 478 48.7
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 3.9e-105 386.0 474 47.0
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.9e-104 383.6 481 47.6
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 3.3e-104 382.9 463 48.4
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 5.7e-104 382.1 460 50.0
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.8e-103 379.0 451 47.7
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 6.9e-102 375.2 468 47.0
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 6.9e-102 375.2 461 46.6
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.2e-101 374.4 472 47.0
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.5e-101 374.0 467 45.8
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.6e-101 373.2 465 46.2
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 2.9e-100 369.8 440 47.0
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 8.5e-100 368.2 474 46.6
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 9.4e-99 364.8 460 44.6
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.5e-96 356.7 455 45.5
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.3e-95 354.4 460 44.8
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.7e-95 354.0 463 45.4
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 4.8e-95 352.4 462 45.2
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.8e-94 350.5 477 42.8
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 9.1e-94 348.2 456 45.4
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-93 347.1 470 44.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.0e-93 347.1 477 42.6
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 2.6e-93 346.7 460 44.1
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.9e-93 345.5 471 44.6
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 6.5e-92 342.0 464 44.0
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.2e-91 339.3 476 42.4
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 5.5e-91 339.0 470 42.1
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.5e-91 339.0 469 43.3
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 2.1e-90 337.0 428 44.6
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 6.1e-90 335.5 439 44.4
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.9e-89 332.8 463 43.6
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 1.1e-88 331.3 489 41.5
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 7.4e-88 328.6 466 42.7
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 7.4e-88 328.6 482 42.9
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 9.7e-88 328.2 477 42.6
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 3.7e-87 326.2 468 42.7
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.1e-86 324.7 485 40.8
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 2.4e-86 323.6 454 42.7
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 3.1e-86 323.2 475 40.2
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 3.1e-86 323.2 466 40.6
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.3e-86 322.4 450 44.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 3.8e-84 316.2 468 41.2
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.5e-83 314.3 407 45.5
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 4.2e-83 312.8 461 41.4
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 5.2e-81 305.8 472 39.8
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 8.8e-81 305.1 444 40.1
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 1.5e-80 304.3 462 40.7
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.0e-80 303.9 419 43.4
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 5.7e-80 302.4 463 41.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 9.7e-80 301.6 467 40.5
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 1.3e-79 301.2 434 43.1
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 2.2e-79 300.4 479 39.9
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 8.2e-79 298.5 457 40.3
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 8.2e-79 298.5 437 43.2
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.0e-77 293.9 410 41.5
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.6e-77 293.5 478 40.0
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.6e-77 293.5 446 41.9
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.0e-76 291.6 463 40.4
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.2e-76 290.4 464 40.1
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 2.9e-76 290.0 440 41.1
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 8.5e-76 288.5 460 39.3
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 2.5e-75 287.0 480 39.2
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 2.5e-75 287.0 452 38.5
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 7.2e-75 285.4 462 41.3
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 9.4e-75 285.0 443 40.4
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.1e-74 283.9 431 39.7
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 8.0e-74 282.0 469 38.4
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 8.8e-73 278.5 340 45.6
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.5e-72 277.7 443 38.8
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.0e-72 277.3 413 40.4
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.6e-72 276.9 468 40.0
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 5.7e-72 275.8 452 38.5
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 1.1e-70 271.6 340 45.6
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 7.0e-70 268.9 451 36.6
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.7e-68 264.2 338 44.4
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.6e-61 241.1 453 36.9
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 5.0e-60 236.1 454 35.0
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.3e-57 227.3 304 42.4
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 9.8e-56 221.9 309 43.7
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 3.5e-53 213.4 455 34.5
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.6e-50 204.5 330 39.1
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.4e-49 201.4 316 41.1
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 3.6e-34 150.2 198 41.4
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.4e-33 148.3 345 32.8
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 6.6e-28 129.4 214 39.7
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 8.1e-26 122.5 141 47.5
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-25 120.2 121 53.7
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.4e-24 117.1 121 52.9
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.4e-24 117.1 121 52.9
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 8.7e-20 102.4 120 50.0
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.3e-19 100.5 130 49.2
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 7.3e-19 99.4 193 35.2
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 3.1e-17 94.0 479 25.5
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 1.5e-16 91.7 79 57.0
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-15 88.6 162 34.6
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-15 88.6 162 34.6
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 8.4e-15 85.9 123 39.8
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.9e-14 84.7 247 31.2
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 4.2e-14 83.6 74 56.8
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 2.1e-13 81.3 446 24.4
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.1e-09 67.4 121 36.4
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 9.9e-08 62.4 99 35.4
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.9e-07 60.8 55 50.9


User provided reference genes

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