Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05011 Brassica carinata HOM05D001670 ORTHO05D090376 8.5e-55 216.9 117 100.0
C08p54070 Brassica napus HOM05D001670 ORTHO05D002980 5.8e-27 124.4 72 95.8
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 5.8e-27 124.4 72 95.8
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 2.4e-25 119.0 72 91.7
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 3.2e-25 118.6 69 95.7
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 1.5e-22 109.8 72 84.7
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 7.3e-22 107.5 87 72.4
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 1.6e-21 106.3 72 83.3
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 1.6e-21 106.3 72 83.3
BcaNung05287 Brassica carinata HOM05D001670 ORTHO05D002980 2.3e-20 102.4 72 80.6
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.3e-20 102.4 72 80.6
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 2.3e-20 102.4 72 80.6
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 6.8e-20 100.9 86 66.3
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 6.8e-20 100.9 86 67.4
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 2.2e-18 95.9 86 61.6
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 2.4e-17 92.4 86 64.0
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 3.2e-17 92.0 72 72.2
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.2e-16 90.1 72 76.4
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.2e-16 90.1 72 76.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 2.1e-16 89.4 72 75.0
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-16 89.4 72 75.0
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 2.1e-16 89.4 72 75.0
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 3.9e-15 85.1 72 70.8
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.5e-11 73.2 86 55.8
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.7e-10 69.7 85 54.1
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.7e-10 69.7 83 54.2
C09p21920 Brassica napus HOM05D001670 ORTHO05D015800 1.0e-07 60.5 57 68.4
BcaC09g49888 Brassica carinata HOM05D003531 ORTHO05D015800 1.5e-06 56.6 35 85.7
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.5e-06 56.6 35 85.7
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 1.5e-06 56.6 35 85.7


User provided reference genes

Program Settings