Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03312 Brassica carinata HOM05D004116 ORTHO05D004734 8.8e-301 1036.2 527 100.0
A02p03010 Brassica napus HOM05D004116 ORTHO05D004734 8.5e-195 684.1 501 75.0
BraA02t05272Z Brassica rapa HOM05D004116 ORTHO05D004734 8.5e-195 684.1 497 75.5
A10p23490 Brassica napus HOM05D004116 ORTHO05D004734 7.9e-193 677.6 503 73.8
BraA10t44416Z Brassica rapa HOM05D004116 ORTHO05D004734 7.9e-193 677.6 503 73.8
BcaC03g13414 Brassica carinata HOM05D004116 ORTHO05D004734 3.0e-192 675.6 499 74.3
C02p07680 Brassica napus HOM05D004116 ORTHO05D004734 1.1e-191 673.7 505 74.1
BolC2t06699H Brassica oleracea HOM05D004116 ORTHO05D004734 1.1e-191 673.7 505 74.1
Thhalv10012542m.g Eutrema salsugineum HOM05D004116 ORTHO05D004734 1.1e-191 673.7 500 75.4
Sp6g28690 Schrenkiella parvula HOM05D004116 ORTHO05D004734 2.6e-191 672.5 500 74.4
AT5G15400 Arabidopsis thaliana HOM05D004116 ORTHO05D004734 4.1e-189 665.2 501 74.3
C09p61720 Brassica napus HOM05D004116 ORTHO05D004734 1.2e-188 663.7 500 73.6
Carub.0006s1357 Capsella rubella HOM05D004116 ORTHO05D004734 2.6e-188 662.5 501 73.5
BolC9t59011H Brassica oleracea HOM05D004116 ORTHO05D004734 5.9e-188 661.4 501 73.7
AL6G26260 Arabidopsis lyrata HOM05D004116 ORTHO05D004734 1.2e-185 653.7 538 69.7
Aa31LG11G14160 Aethionema arabicum HOM05D004116 ORTHO05D004734 8.8e-184 647.5 522 71.1
CARHR197910 Cardamine hirsuta HOM05D004116 ORTHO05D004734 3.1e-181 639.0 501 71.7
THA.LOC104822346 Tarenaya hassleriana HOM05D004116 ORTHO05D004734 9.1e-173 610.9 537 65.5
PGR004G0109 Punica granatum HOM05D004116 ORTHO05D004734 1.5e-146 523.9 499 60.1
Cpa.g.sc14.139 Carica papaya HOM05D004116 ORTHO05D004734 3.3e-146 522.7 511 58.9
Prupe.3G259400 Prunus persica HOM05D004116 ORTHO05D004734 4.3e-146 522.3 499 59.1
Dinv33806 Davidia involucrata HOM05D004116 ORTHO05D004734 1.1e-144 517.7 509 57.8
Hma1.2p1_0037F.1_g023840 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 1.4e-144 517.3 504 59.5
Dinv11490 Davidia involucrata HOM05D004116 ORTHO05D004734 2.3e-144 516.5 509 58.5
DCAR_011063 Daucus carota HOM05D004116 ORTHO05D004734 3.1e-144 516.2 519 57.8
Nitab4.5_0000565g0080 Nicotiana tabacum HOM05D004116 ORTHO05D004734 2.6e-143 513.1 529 57.5
MD17G1056200 Malus domestica HOM05D004116 ORTHO05D004734 3.4e-143 512.7 497 57.9
Actinidia26244 Actinidia chinensis HOM05D004116 ORTHO05D004734 5.8e-143 511.9 508 57.9
Haze_14475 Corylus avellana HOM05D004116 ORTHO05D004734 7.5e-143 511.5 510 58.6
Ciclev10010958m.g Citrus clementina HOM05D004116 ORTHO05D004734 9.8e-143 511.1 511 58.3
arahy.Tifrunner.gnm1.ann1.JWLU7F Arachis hypogaea HOM05D004116 ORTHO05D004734 2.2e-142 510.0 506 57.5
arahy.Tifrunner.gnm1.ann1.M1DWNQ Arachis hypogaea HOM05D004116 ORTHO05D004734 2.2e-142 510.0 506 57.5
Lalb_Chr21g0318471 Lupinus albus HOM05D004116 ORTHO05D004734 8.3e-142 508.1 514 57.8
vmacro18164 Vaccinium macrocarpon HOM05D004116 ORTHO05D004734 1.4e-141 507.3 508 58.9
CAN.G206.195 Capsicum annuum HOM05D004116 ORTHO05D004734 2.4e-141 506.5 530 57.4
TPR.G26216 Trifolium pratense HOM05D004116 ORTHO05D004734 2.4e-141 506.5 506 57.9
Nitab4.5_0008573g0070 Nicotiana tabacum HOM05D004116 ORTHO05D004734 5.4e-141 505.4 528 56.6
Lj4C115G25 Lonicera japonica HOM05D004116 ORTHO05D004734 2.1e-140 503.4 509 58.0
Cfa007620 Carpinus fangiana HOM05D004116 ORTHO05D004734 2.7e-140 503.1 510 56.9
MSTRG.23904 Avicennia marina HOM05D004116 ORTHO05D004734 3.5e-140 502.7 550 54.0
CSS0030715 Camellia sinensis var. sinensis HOM05D004116 ORTHO05D004734 3.5e-140 502.7 508 58.1
Eucgr.I01989 Eucalyptus grandis HOM05D004116 ORTHO05D004734 3.0e-139 499.6 502 58.2
MELO3C009839.2 Cucumis melo HOM05D004116 ORTHO05D004734 5.1e-139 498.8 507 55.8
Atru.chr8.371 Acer truncatum HOM05D004116 ORTHO05D004734 6.6e-139 498.4 512 57.2
Migut.H00657 Erythranthe guttata HOM05D004116 ORTHO05D004734 1.1e-138 497.7 507 57.4
PGSC0003DMG400001440 Solanum tuberosum HOM05D004116 ORTHO05D004734 1.1e-138 497.7 528 56.2
ClCG10G015430 Citrullus lanatus HOM05D004116 ORTHO05D004734 1.5e-138 497.3 507 55.6
Gohir.D09G011100 Gossypium hirsutum HOM05D004116 ORTHO05D004734 2.5e-138 496.5 511 56.8
Gorai.006G012900 Gossypium raimondii HOM05D004116 ORTHO05D004734 2.5e-138 496.5 511 56.8
Oeu045355.1 Olea europaea HOM05D004116 ORTHO05D004734 2.5e-138 496.5 509 57.4
CsaV3_3G041070 Cucumis sativus L. HOM05D004116 ORTHO05D004734 3.3e-138 496.1 507 55.6
VMungo0464G1725 Vigna mungo HOM05D004116 ORTHO05D004734 3.3e-138 496.1 511 56.9
TAR629G1084 Trochodendron aralioides HOM05D004116 ORTHO05D004734 4.3e-138 495.7 508 57.5
Sopen02g033270 Solanum pennellii HOM05D004116 ORTHO05D004734 7.3e-138 495.0 528 55.7
Phvul.004G033100 Phaseolus vulgaris HOM05D004116 ORTHO05D004734 1.6e-137 493.8 511 56.6
Rhsim08G0073200 Rhododendron simsii HOM05D004116 ORTHO05D004734 2.1e-137 493.4 508 56.9
QL02p039361 Quercus lobata HOM05D004116 ORTHO05D004734 4.7e-137 492.3 501 57.9
QL02p039609 Quercus lobata HOM05D004116 ORTHO05D004734 4.7e-137 492.3 501 57.9
RcHm_v2.0_Chr2g0166651 Rosa chinensis HOM05D004116 ORTHO05D004734 4.7e-137 492.3 538 55.0
CANSAT64G2358 Cannabis sativa HOM05D004116 ORTHO05D004734 8.1e-137 491.5 504 57.7
Cc07_g03830 Coffea canephora HOM05D004116 ORTHO05D004734 1.1e-136 491.1 507 56.4
Duzib264G1228 Durio zibethinus HOM05D004116 ORTHO05D004734 1.4e-136 490.7 510 57.1
MD09G1060800 Malus domestica HOM05D004116 ORTHO05D004734 2.3e-136 490.0 516 56.2
Lju41A7G39 Lonicera japonica HOM05D004116 ORTHO05D004734 4.0e-136 489.2 503 57.9
Ca_04866_v3 Cicer arietinum L. HOM05D004116 ORTHO05D004734 8.9e-136 488.0 500 56.4
Lsat_1_v5_gn_4_170201 Lactuca sativa HOM05D004116 ORTHO05D004734 8.9e-136 488.0 496 57.7
GSVIVG01011484001 Vitis vinifera HOM05D004116 ORTHO05D004734 1.2e-135 487.6 509 58.2
MBI19_g32361_MAGBIO Magnolia biondii HOM05D004116 ORTHO05D004734 1.5e-135 487.3 508 57.3
CiPaw.03G091800 Carya illinoinensis HOM05D004116 ORTHO05D004734 2.0e-135 486.9 508 56.9
FAN05G0837 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.4e-135 486.1 535 54.4
SGA_v2.0_scaffold4G02415 Striga asiatica HOM05D004116 ORTHO05D004734 5.8e-135 485.3 509 57.6
Sc10g0003320 Simmondsia chinensis HOM05D004116 ORTHO05D004734 7.6e-135 485.0 514 57.0
Thecc.04G090300 Theobroma cacao HOM05D004116 ORTHO05D004734 4.9e-134 482.3 508 56.9
Duzib147G0424 Durio zibethinus HOM05D004116 ORTHO05D004734 1.1e-133 481.1 509 56.6
Glyma.13G059200 Glycine max HOM05D004116 ORTHO05D004734 1.9e-133 480.3 508 55.7
TWI34G1118 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 1.9e-133 480.3 509 55.2
Glyma.19G027200 Glycine max HOM05D004116 ORTHO05D004734 4.1e-133 479.2 506 55.5
TWI60G1537 Tripterygium wilfordii HOM05D004116 ORTHO05D004734 1.6e-132 477.2 509 54.6
HanXRQChr09g0264141 Helianthus annuus HOM05D004116 ORTHO05D004734 2.1e-132 476.9 497 55.9
Manes.01G099400 Manihot esculenta HOM05D004116 ORTHO05D004734 2.7e-132 476.5 492 56.5
Nn4g23336 Nelumbo nucifera HOM05D004116 ORTHO05D004734 2.7e-132 476.5 528 54.7
Sed0005067 Sechium edule HOM05D004116 ORTHO05D004734 2.7e-132 476.5 504 55.2
PGSC0003DMG400007132 Solanum tuberosum HOM05D004116 ORTHO05D004734 2.7e-132 476.5 508 55.5
Medtr6g013690 Medicago truncatula HOM05D004116 ORTHO05D004734 7.8e-132 474.9 530 53.8
Lj2g0025037 Lotus japonicus HOM05D004116 ORTHO05D004734 1.3e-131 474.2 512 54.1
FAN09G3106 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.1e-130 471.1 536 53.2
FvH4_6g47550 Fragaria vesca HOM05D004116 ORTHO05D004734 1.9e-130 470.3 503 55.9
FAN14G3940 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.9e-130 470.3 503 55.9
FAN02G1010 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.5e-130 469.9 537 53.1
SGA_v2.0_scaffold413G51160 Striga asiatica HOM05D004116 ORTHO05D004734 3.3e-130 469.5 497 55.7
Potri.017G089600 Populus trichocarpa HOM05D004116 ORTHO05D004734 3.1e-128 463.0 495 54.5
Peaxi162Scf00166g00825 Petunia axillaris HOM05D004116 ORTHO05D004734 1.7e-126 457.2 529 52.2
HanXRQChr15g0488441 Helianthus annuus HOM05D004116 ORTHO05D004734 2.9e-126 456.4 496 54.2
Sopen06g031210 Solanum pennellii HOM05D004116 ORTHO05D004734 3.8e-126 456.1 527 51.8
EL10Ac2g03047 Beta vulgaris HOM05D004116 ORTHO05D004734 4.9e-126 455.7 629 46.9
Potri.004G121200 Populus trichocarpa HOM05D004116 ORTHO05D004734 2.7e-124 449.9 496 53.6
Sabra17G0078900 Salix brachista HOM05D004116 ORTHO05D004734 3.5e-124 449.5 496 53.2
COL.COLO4_07430 Corchorus olitorius HOM05D004116 ORTHO05D004734 3.0e-123 446.4 504 53.8
Aqoxy3G03559 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 5.1e-123 445.7 544 49.4
Solyc06g074770.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 3.3e-122 443.0 504 52.4
PSO063G3309 Papaver somniferum HOM05D004116 ORTHO05D004734 7.3e-122 441.8 512 52.3
PSO013G0369 Papaver somniferum HOM05D004116 ORTHO05D004734 1.1e-120 438.0 512 51.6
Psat1g069040 Pisum sativum HOM05D004116 ORTHO05D004734 4.9e-118 429.1 460 54.8
Aqoxy3G01362 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 3.2e-117 426.4 528 48.1
Gohir.A09G012200 Gossypium hirsutum HOM05D004116 ORTHO05D004734 6.6e-115 418.7 508 51.2
unitig_744.g24002 Utricularia gibba HOM05D004116 ORTHO05D004734 7.9e-108 395.2 469 52.0
SHI16441 Sapria himalayana HOM05D004116 ORTHO05D004734 1.0e-107 394.8 511 46.8
Aqoxy3G00662 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 1.8e-99 367.5 420 50.2
RcHm_v2.0_Chr5g0047221 Rosa chinensis HOM05D004116 ORTHO05D004734 8.7e-99 365.2 496 48.6
HPP92_023626 Vanilla planifolia HOM05D004116 ORTHO05D004734 5.8e-95 352.4 450 48.2
Os03g0427900 Oryza sativa ssp. japonica HOM05D004116 ORTHO05D004734 3.8e-94 349.7 494 45.3
AUR62034478 Chenopodium quinoa HOM05D004116 ORTHO05D004734 4.2e-93 346.3 546 43.2
AUR62018140 Chenopodium quinoa HOM05D004116 ORTHO05D004734 2.1e-92 344.0 540 43.5
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 2.2e-89 334.0 404 50.2
AagrBONN_evm.TU.Sc2ySwM_340.219 Anthoceros agrestis HOM05D004116 ORTHO05D004734 4.8e-89 332.8 504 43.3
Mapoly0052s0078 Marchantia polymorpha HOM05D004116 ORTHO05D004734 4.5e-87 326.2 506 42.7
Pp3c15_20630 Physcomitrium patens HOM05D004116 ORTHO05D004734 2.3e-83 313.9 517 40.2
FAN11G2920 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.0e-83 313.5 467 45.0
SMO356G0406 Selaginella moellendorffii HOM05D004116 ORTHO05D004734 4.2e-77 293.1 504 38.3
FvH4_3g25930 Fragaria vesca HOM05D004116 ORTHO05D004734 3.7e-73 280.0 448 43.8
PSO144G0086 Papaver somniferum HOM05D004116 ORTHO05D004734 4.5e-71 273.1 488 39.1
ATR0111G012 Amborella trichopoda HOM05D004116 ORTHO05D004734 2.2e-70 270.8 254 58.3
FAN25G2854 Fragaria x ananassa HOM05D004116 ORTHO05D004734 8.5e-70 268.9 494 41.3
PSO170G0544 Papaver somniferum HOM05D004116 ORTHO05D004734 3.6e-68 263.5 489 40.1
PSO325G0009 Papaver somniferum HOM05D004116 ORTHO05D004734 1.4e-67 261.5 488 39.1
Ah.12g062550 Amaranthus hybridus HOM05D004116 ORTHO05D004734 2.0e-66 257.7 239 60.7
Actinidia17574 Actinidia chinensis HOM05D004116 ORTHO05D004734 2.8e-65 253.8 258 58.1
CBR_g12111 Chara braunii HOM05D004116 ORTHO05D004734 1.6e-63 248.1 516 34.5
Hma1.2p1_1813F.1_g303850 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 1.6e-63 248.1 184 69.0
Ah.12g062560 Amaranthus hybridus HOM05D004116 ORTHO05D004734 2.2e-57 227.6 292 50.7
QL02p039616 Quercus lobata HOM05D004116 ORTHO05D004734 3.1e-56 223.8 285 49.5
PSO761G0054 Papaver somniferum HOM05D004116 ORTHO05D004734 2.0e-55 221.1 463 36.1
Zm00001eb393280 Zea mays HOM05D004116 ORTHO05D004734 1.2e-52 211.8 184 60.9
Zm00001eb020370 Zea mays HOM05D004116 ORTHO05D004734 3.6e-52 210.3 185 60.0
Psat1g069080 Pisum sativum HOM05D004116 ORTHO05D004734 3.1e-48 197.2 309 44.3
Lsat_1_v5_gn_8_41221 Lactuca sativa HOM05D004116 ORTHO05D004734 1.1e-45 188.7 348 41.1
PSO017G4845 Papaver somniferum HOM05D004116 ORTHO05D004734 2.5e-45 187.6 533 32.3
Oeu034757.1 Olea europaea HOM05D004116 ORTHO05D004734 1.2e-44 185.3 137 73.0
FAN21G1378 Fragaria x ananassa HOM05D004116 ORTHO05D004734 1.7e-41 174.9 190 57.9
FAN16G0481 Fragaria x ananassa HOM05D004116 ORTHO05D004734 4.9e-41 173.3 186 58.6
BcaC04g24243 Brassica carinata HOM05D004116 ORTHO05D004734 1.3e-38 165.2 91 93.4
PRCOL_00002499 Prasinoderma coloniale HOM05D004116 ORTHO05D004734 2.3e-38 164.5 505 28.9
Solyc02g088550.4 Solanum lycopersicum HOM05D004116 ORTHO05D004734 6.4e-33 146.4 547 29.3
FAN16G0041 Fragaria x ananassa HOM05D004116 ORTHO05D004734 8.3e-33 146.0 128 60.9
CDE04G3166 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 2.8e-28 131.0 93 76.3
PSO144G0082 Papaver somniferum HOM05D004116 ORTHO05D004734 8.9e-27 125.9 169 47.9
AL1G40200 Arabidopsis lyrata HOM05D004116 ORTHO05D004734 9.8e-26 122.5 74 82.4
Psat1g069120 Pisum sativum HOM05D004116 ORTHO05D004734 1.6e-23 115.2 93 67.7
Hma1.2p1_0604F.1_g187770 Hydrangea macrophylla HOM05D004116 ORTHO05D004734 4.6e-23 113.6 92 65.2
Cre09.g398350 Chlamydomonas reinhardtii HOM05D004116 ORTHO05D004734 6.6e-22 109.8 228 30.7
CDE04G3780 Ceratophyllum demersum HOM05D004116 ORTHO05D004734 7.3e-21 106.3 72 70.8
Actinidia17576 Actinidia chinensis HOM05D000100 ORTHO05D004702 2.8e-20 104.4 70 70.0
FAN21G1132 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.6e-20 104.0 181 38.7
SalBow6G1256 Salvia bowleyana HOM05D003831 ORTHO05D004440 3.1e-19 100.9 186 40.3
FAN21G0296 Fragaria x ananassa HOM05D004116 ORTHO05D004734 2.6e-18 97.8 63 68.3
FvH4_3g25920 Fragaria vesca HOM05D004116 ORTHO05D004734 4.4e-18 97.1 63 69.8
SEGI_13711 Sequoiadendron giganteum HOM05D004116 ORTHO05D004734 1.3e-17 95.5 71 67.6
FAN12G4053 Fragaria x ananassa HOM05D004116 ORTHO05D004734 4.9e-17 93.6 74 63.5
Aqoxy3G00661 Aquilegia oxysepala HOM05D004116 ORTHO05D004734 6.4e-17 93.2 65 69.2
CBR_g12108 Chara braunii HOM05D004116 ORTHO05D004734 1.4e-16 92.0 65 67.7
FAN16G3124 Fragaria x ananassa HOM05D004116 ORTHO05D004734 3.2e-16 90.9 72 61.1
Lsat_1_v5_gn_1_20041 Lactuca sativa HOM05D004116 ORTHO05D004734 1.2e-12 79.0 83 53.0
PSO384G2573 Papaver somniferum HOM05D004116 ORTHO05D004734 6.8e-11 73.2 68 54.4
CAN.G111.24 Capsicum annuum HOM05D004116 ORTHO05D004734 3.2e-08 64.3 102 43.1
MCO05G368 Micromonas commoda HOM05D004116 ORTHO05D004734 5.4e-08 63.5 70 48.6
Cre12.g519150 Chlamydomonas reinhardtii HOM05D004874 ORTHO05D006796 7.1e-08 63.2 59 49.2


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