Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48591 Brassica carinata HOM05D001353 ORTHO05D005187 1.4e-150 536.2 265 100.0
C01p48010 Brassica napus HOM05D001353 ORTHO05D005187 1.0e-127 460.3 260 91.5
A01p37890 Brassica napus HOM05D001353 ORTHO05D005187 8.8e-124 447.2 260 88.8
BraA01t03849Z Brassica rapa HOM05D001353 ORTHO05D005187 2.7e-117 425.6 261 84.7
Thhalv10021339m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 4.5e-112 408.3 264 77.3
BcaC09g48592 Brassica carinata HOM05D001353 ORTHO05D005187 1.5e-107 393.3 269 75.1
Carub.0003s1597 Capsella rubella HOM05D001353 ORTHO05D005187 3.6e-101 372.1 255 72.2
AL3G28920 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 2.2e-98 362.8 248 73.0
CARHR091410 Cardamine hirsuta HOM05D001353 ORTHO05D005187 7.0e-97 357.8 256 71.1
Aa31LG8G3360 Aethionema arabicum HOM05D001353 ORTHO05D005187 7.3e-78 294.7 248 64.5
Sp3g14590 Schrenkiella parvula HOM05D001353 ORTHO05D005187 7.0e-73 278.1 179 76.0
Thhalv10020736m.g Eutrema salsugineum HOM05D001353 ORTHO05D005187 6.0e-72 275.0 267 53.9
BraA03t13123Z Brassica rapa HOM05D001353 ORTHO05D005187 2.3e-71 273.1 277 53.8
BcaC01g03834 Brassica carinata HOM05D001353 ORTHO05D005187 3.0e-71 272.7 263 54.0
A03p39730 Brassica napus HOM05D001353 ORTHO05D005187 3.0e-71 272.7 271 54.2
AL3G28930 Arabidopsis lyrata HOM05D001353 ORTHO05D005187 1.9e-70 270.0 306 49.3
Carub.0003s1598 Capsella rubella HOM05D001353 ORTHO05D005187 2.1e-69 266.5 305 48.9
Sp3g14600 Schrenkiella parvula HOM05D001353 ORTHO05D005187 3.4e-67 259.2 267 50.9
THA.LOC104817973 Tarenaya hassleriana HOM05D001353 ORTHO05D005187 3.4e-67 259.2 277 50.2
CARHR091420 Cardamine hirsuta HOM05D001353 ORTHO05D005187 2.2e-66 256.5 305 46.9
MELO3C024262.2 Cucumis melo HOM05D001353 ORTHO05D005187 5.4e-65 251.9 323 44.0
CsaV3_7G033510 Cucumis sativus L. HOM05D001353 ORTHO05D005187 5.4e-65 251.9 318 44.7
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 3.5e-64 249.2 261 54.0
Sabra01G0153700 Salix brachista HOM05D001353 ORTHO05D005187 3.5e-64 249.2 318 45.3
GSVIVG01017044001 Vitis vinifera HOM05D001353 ORTHO05D005187 6.0e-64 248.4 288 47.9
Potri.001G186600 Populus trichocarpa HOM05D001353 ORTHO05D005187 1.7e-63 246.9 319 45.8
CiPaw.01G234100 Carya illinoinensis HOM05D001353 ORTHO05D005187 3.0e-63 246.1 312 45.5
RcHm_v2.0_Chr2g0139461 Rosa chinensis HOM05D001353 ORTHO05D005187 5.1e-63 245.4 257 50.6
Manes.11G036600 Manihot esculenta HOM05D001353 ORTHO05D005187 8.6e-63 244.6 278 47.8
MD17G1188900 Malus domestica HOM05D001353 ORTHO05D005187 1.9e-62 243.4 313 45.0
Thecc.06G095300 Theobroma cacao HOM05D001353 ORTHO05D005187 1.9e-62 243.4 323 43.7
CANSAT56G0514 Cannabis sativa HOM05D001353 ORTHO05D005187 7.3e-62 241.5 314 45.2
Medtr2g101350 Medicago truncatula HOM05D001353 ORTHO05D005187 9.5e-62 241.1 320 43.4
Eucgr.F03052 Eucalyptus grandis HOM05D001353 ORTHO05D005187 1.2e-61 240.7 276 45.3
Hma1.2p1_0659F.1_g197330 Hydrangea macrophylla HOM05D001353 ORTHO05D005187 1.6e-61 240.4 263 49.8
DCAR_007575 Daucus carota HOM05D001353 ORTHO05D005187 2.8e-61 239.6 289 45.7
Sed0007714 Sechium edule HOM05D001353 ORTHO05D005187 3.6e-61 239.2 318 42.5
TAR383G0250 Trochodendron aralioides HOM05D001353 ORTHO05D005187 3.6e-61 239.2 312 44.2
Cfa002108 Carpinus fangiana HOM05D001353 ORTHO05D005187 6.2e-61 238.4 319 43.6
Haze_16338 Corylus avellana HOM05D001353 ORTHO05D005187 6.2e-61 238.4 283 45.9
QL05p021219 Quercus lobata HOM05D001353 ORTHO05D005187 8.1e-61 238.0 319 43.3
FvH4_6g31960 Fragaria vesca HOM05D001353 ORTHO05D005187 1.1e-60 237.7 281 46.3
arahy.Tifrunner.gnm1.ann1.K0TTLC Arachis hypogaea HOM05D001353 ORTHO05D005187 1.8e-60 236.9 278 46.8
CSS0044224 Camellia sinensis var. sinensis HOM05D001353 ORTHO05D005187 4.0e-60 235.7 328 43.6
Lalb_Chr24g0396041 Lupinus albus HOM05D001353 ORTHO05D005187 8.9e-60 234.6 321 43.6
arahy.Tifrunner.gnm1.ann1.8T8ZNV Arachis hypogaea HOM05D001353 ORTHO05D005187 1.2e-59 234.2 284 45.4
VMungo1080G1628 Vigna mungo HOM05D001353 ORTHO05D005187 1.2e-59 234.2 280 45.0
Ca_01153_v3 Cicer arietinum L. HOM05D001353 ORTHO05D005187 1.5e-59 233.8 320 42.2
Gohir.D03G060300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.5e-59 233.8 324 42.6
PSO566G0332 Papaver somniferum HOM05D001353 ORTHO05D005187 1.5e-59 233.8 276 47.8
Lsat_1_v5_gn_1_34781 Lactuca sativa HOM05D001353 ORTHO05D005187 2.6e-59 233.0 233 51.9
Nitab4.5_0000568g0110 Nicotiana tabacum HOM05D001353 ORTHO05D005187 2.6e-59 233.0 274 47.4
Prupe.3G063900 Prunus persica HOM05D001353 ORTHO05D005187 2.6e-59 233.0 318 43.4
ATR0315G123 Amborella trichopoda HOM05D001353 ORTHO05D005187 4.4e-59 232.3 224 50.9
TPR.G37234 Trifolium pratense HOM05D001353 ORTHO05D005187 4.4e-59 232.3 320 41.6
vmacro16977 Vaccinium macrocarpon HOM05D001353 ORTHO05D005187 4.4e-59 232.3 252 47.6
C03p48170 Brassica napus HOM05D001353 ORTHO05D005187 5.8e-59 231.9 364 39.6
Glyma.15G018200 Glycine max HOM05D001353 ORTHO05D005187 5.8e-59 231.9 285 44.6
Gorai.003G064100 Gossypium raimondii HOM05D001353 ORTHO05D005187 7.6e-59 231.5 324 42.6
Gorai.006G097100 Gossypium raimondii HOM05D001353 ORTHO05D005187 7.6e-59 231.5 317 43.2
Phvul.005G170400 Phaseolus vulgaris HOM05D001353 ORTHO05D005187 9.9e-59 231.1 280 43.6
QL05p021238 Quercus lobata HOM05D001353 ORTHO05D005187 9.9e-59 231.1 319 43.6
Gohir.D09G081500 Gossypium hirsutum HOM05D001353 ORTHO05D005187 1.3e-58 230.7 317 42.9
Duzib160G0428 Durio zibethinus HOM05D001353 ORTHO05D005187 2.9e-58 229.6 320 42.8
ClCG09G001840 Citrullus lanatus HOM05D001353 ORTHO05D005187 3.8e-58 229.2 281 44.5
Ciclev10025383m.g Citrus clementina HOM05D001353 ORTHO05D005187 3.8e-58 229.2 324 41.0
Cpa.g.sc109.36 Carica papaya HOM05D001353 ORTHO05D005187 4.9e-58 228.8 181 59.7
Cc04_g02860 Coffea canephora HOM05D001353 ORTHO05D005187 4.9e-58 228.8 324 41.4
HanXRQChr04g0096261 Helianthus annuus HOM05D001353 ORTHO05D005187 1.4e-57 227.3 296 45.3
HPP92_005271 Vanilla planifolia HOM05D001353 ORTHO05D005187 3.2e-57 226.1 284 44.7
Actinidia32713 Actinidia chinensis HOM05D001353 ORTHO05D005187 4.2e-57 225.7 325 42.8
BolC3t17020H Brassica oleracea HOM05D001353 ORTHO05D005187 4.2e-57 225.7 232 55.6
CDE05G3629 Ceratophyllum demersum HOM05D001353 ORTHO05D005187 4.2e-57 225.7 292 45.5
Solyc03g120480.3 Solanum lycopersicum HOM05D001353 ORTHO05D005187 4.2e-57 225.7 286 43.7
PGR102G2383 Punica granatum HOM05D001353 ORTHO05D005187 5.4e-57 225.3 328 40.5
ATR0315G016 Amborella trichopoda HOM05D001353 ORTHO05D005187 9.2e-57 224.6 316 41.5
Gohir.A09G081400 Gossypium hirsutum HOM05D001353 ORTHO05D005187 9.2e-57 224.6 320 42.8
Sopen03g039360 Solanum pennellii HOM05D001353 ORTHO05D005187 9.2e-57 224.6 327 40.7
Aqoxy7G01510 Aquilegia oxysepala HOM05D001353 ORTHO05D005187 2.1e-56 223.4 321 40.8
CAN.G438.39 Capsicum annuum HOM05D001353 ORTHO05D005187 2.1e-56 223.4 325 41.5
Nn2g11646 Nelumbo nucifera HOM05D001353 ORTHO05D005187 2.7e-56 223.0 322 41.9
PSO782G2586 Papaver somniferum HOM05D001353 ORTHO05D005187 4.6e-56 222.2 258 48.4
MSTRG.11044 Avicennia marina HOM05D001353 ORTHO05D005187 7.8e-56 221.5 186 58.6
FAN02G4091 Fragaria x ananassa HOM05D001353 ORTHO05D005187 2.3e-55 219.9 280 45.4
Lj3g0013233 Lotus japonicus HOM05D001353 ORTHO05D005187 2.3e-55 219.9 281 43.4
HanXRQChr04g0096271 Helianthus annuus HOM05D001353 ORTHO05D005187 3.9e-55 219.2 263 49.4
PGSC0003DMG401002551 Solanum tuberosum HOM05D001353 ORTHO05D005187 5.1e-55 218.8 297 41.8
AT3G16220 Arabidopsis thaliana HOM05D001353 ORTHO05D005187 1.9e-54 216.9 161 68.9
Gohir.A02G119300 Gossypium hirsutum HOM05D001353 ORTHO05D005187 2.5e-54 216.5 186 57.0
SalBow2G1883 Salvia bowleyana HOM05D001353 ORTHO05D005187 3.3e-54 216.1 181 59.7
SMO340G0259 Selaginella moellendorffii HOM05D001353 ORTHO05D005187 3.3e-54 216.1 223 48.9
AUR62022162 Chenopodium quinoa HOM05D001353 ORTHO05D005187 4.3e-54 215.7 287 43.2
Migut.I00929 Erythranthe guttata HOM05D001353 ORTHO05D005187 5.6e-54 215.3 349 38.1
Os01g0231900 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 5.6e-54 215.3 264 42.4
AUR62031870 Chenopodium quinoa HOM05D001353 ORTHO05D005187 1.3e-53 214.2 322 40.4
Zm00001eb119210 Zea mays HOM05D001353 ORTHO05D005187 1.3e-53 214.2 259 42.9
ECA247G1811 Erigeron canadensis HOM05D001353 ORTHO05D005187 1.6e-53 213.8 185 58.4
Nitab4.5_0006985g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 1.6e-53 213.8 290 42.1
Hund00659 Selenicereus undatus HOM05D001353 ORTHO05D005187 8.1e-53 211.5 321 39.3
SGA_v2.0_scaffold5G02539 Striga asiatica HOM05D001353 ORTHO05D005187 5.3e-52 208.8 181 56.9
EL10Ac9g22047 Beta vulgaris HOM05D001353 ORTHO05D005187 1.5e-51 207.2 202 51.5
Rhsim12G0201500 Rhododendron simsii HOM05D001353 ORTHO05D000070 2.6e-51 206.5 188 54.8
Dinv30464 Davidia involucrata HOM05D001353 ORTHO05D005187 1.3e-50 204.1 318 41.5
Peaxi162Scf00015g00128 Petunia axillaris HOM05D001353 ORTHO05D005187 1.3e-50 204.1 285 40.7
Nitab4.5_0001591g0200 Nicotiana tabacum HOM05D001353 ORTHO05D005187 4.9e-50 202.2 264 46.2
AagrBONN_evm.TU.Sc2ySwM_368.659 Anthoceros agrestis HOM05D001353 ORTHO05D005187 2.1e-48 196.8 251 40.6
Os01g0231800 Oryza sativa ssp. japonica HOM05D001353 ORTHO05D005187 1.0e-47 194.5 221 46.6
MBI01_g06185_MAGBIO Magnolia biondii HOM05D001353 ORTHO05D002359 1.3e-47 194.1 310 39.0
BcaB04g18890 Brassica carinata HOM05D001353 ORTHO05D005187 6.6e-47 191.8 154 63.6
Lj9A510G79 Lonicera japonica HOM05D001353 ORTHO05D005187 1.5e-46 190.7 166 59.0
CAN.G206.170 Capsicum annuum HOM05D001353 ORTHO05D005187 2.5e-46 189.9 193 49.7
BcaC01g03832 Brassica carinata HOM05D001353 ORTHO05D005187 3.3e-46 189.5 144 63.9
COL.COLO4_30466 Corchorus olitorius HOM05D001353 ORTHO05D005187 2.0e-43 180.3 180 51.1
C03p48160 Brassica napus HOM05D001353 ORTHO05D005187 1.7e-42 177.2 178 56.2
BolC3t17094H Brassica oleracea HOM05D001353 ORTHO05D005187 2.2e-42 176.8 180 55.6
Solyc02g088200.4 Solanum lycopersicum HOM05D001353 ORTHO05D005187 4.2e-41 172.6 164 52.4
Sopen02g032890 Solanum pennellii HOM05D001353 ORTHO05D005187 5.4e-41 172.2 164 52.4
Nitab4.5_0021337g0010 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.5e-40 169.5 253 42.3
Atru.chr1.3463 Acer truncatum HOM05D001353 ORTHO05D005187 3.0e-39 166.4 147 55.1
Mapoly0110s0022 Marchantia polymorpha HOM05D001353 ORTHO05D005187 3.0e-39 166.4 187 43.9
PGSC0003DMG400001428 Solanum tuberosum HOM05D001353 ORTHO05D005187 3.0e-39 166.4 165 51.5
TWI12G1071 Tripterygium wilfordii HOM05D001353 ORTHO05D005187 9.6e-38 161.4 285 35.8
AT3G16230 Arabidopsis thaliana HOM05D001353 ORTHO05D005187 1.3e-37 161.0 217 45.2
Actinidia21695 Actinidia chinensis HOM05D001353 ORTHO05D005187 3.7e-37 159.5 214 45.3
Nitab4.5_0011578g0030 Nicotiana tabacum HOM05D001353 ORTHO05D005187 4.0e-36 156.0 301 36.5
BcaC09g48593 Brassica carinata HOM05D001353 ORTHO05D005187 9.0e-36 154.8 88 80.7
SHI11057 Sapria himalayana HOM05D001353 ORTHO05D005187 5.5e-33 145.6 163 46.6
Psat1g005440 Pisum sativum HOM05D001353 ORTHO05D005187 3.5e-32 142.9 233 39.5
CBR_g20332 Chara braunii HOM05D001353 ORTHO05D005187 5.7e-30 135.6 185 38.9
CANSAT56G3175 Cannabis sativa HOM05D001353 ORTHO05D005187 3.7e-29 132.9 134 50.7
unitig_22.g6212 Utricularia gibba HOM05D001353 ORTHO05D005187 4.0e-28 129.4 121 50.4
Cre01.g008000 Chlamydomonas reinhardtii HOM05D001353 ORTHO05D005187 7.1e-25 118.6 243 30.9
Glyma.13G355900 Glycine max HOM05D001353 ORTHO05D005187 1.1e-22 111.3 132 45.5
Nitab4.5_0000568g0100 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.7e-21 106.3 147 43.5
Pp3c16_10470 Physcomitrium patens HOM05D001353 ORTHO05D005187 5.3e-20 102.4 121 42.1
Nitab4.5_0000568g0120 Nicotiana tabacum HOM05D001353 ORTHO05D005187 3.8e-18 96.3 115 46.1
FAN05G1388 Fragaria x ananassa HOM05D001353 ORTHO05D005187 2.5e-17 93.6 158 39.9
FAN14G4842 Fragaria x ananassa HOM05D001353 ORTHO05D005187 1.6e-16 90.9 158 38.0
MCO06G129 Micromonas commoda HOM05D001353 ORTHO05D005187 4.6e-16 89.4 223 28.7
Sc10g0007280 Simmondsia chinensis HOM05D001353 ORTHO05D005187 2.0e-14 84.0 195 32.3
Atru.chr1.3457 Acer truncatum HOM05D001353 ORTHO05D005187 6.3e-13 79.0 70 55.7
BolC3t17095H Brassica oleracea HOM05D001353 ORTHO05D000017 3.4e-11 73.2 136 34.6
Medtr8g033020 Medicago truncatula HOM05D001353 ORTHO05D005187 5.9e-11 72.4 43 65.1
SEGI_15304 Sequoiadendron giganteum HOM05D001353 ORTHO05D005187 7.7e-11 72.0 65 46.2
FvH4_4g23310 Fragaria vesca HOM05D001353 ORTHO05D005187 4.2e-09 66.2 70 51.4
FAN12G2992 Fragaria x ananassa HOM05D001353 ORTHO05D005187 4.2e-09 66.2 70 51.4
ATR0315G092 Amborella trichopoda HOM05D001353 ORTHO05D005187 5.5e-09 65.9 47 51.1


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