Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 0.0e+00 1739.2 913 100.0
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 0.0e+00 1690.2 922 96.9
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 0.0e+00 1617.1 917 93.0
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 0.0e+00 1588.5 916 91.3
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 0.0e+00 1587.4 913 91.1
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 0.0e+00 1585.1 917 90.9
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 0.0e+00 1580.1 913 90.5
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 0.0e+00 1573.1 913 90.6
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 0.0e+00 1554.3 917 91.3
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 0.0e+00 1499.2 807 97.5
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 0.0e+00 1499.2 807 97.5
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 0.0e+00 1486.1 911 86.5
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 0.0e+00 1367.1 909 79.6
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1274.2 906 75.4
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 0.0e+00 1273.5 895 72.5
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 0.0e+00 1271.1 893 73.7
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 0.0e+00 1265.0 879 75.4
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 0.0e+00 1259.2 906 74.5
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 0.0e+00 1258.0 906 73.0
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 0.0e+00 1257.7 879 74.9
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 0.0e+00 1254.6 878 74.8
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 0.0e+00 1252.3 839 75.1
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 0.0e+00 1249.2 836 77.8
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 0.0e+00 1246.1 844 75.0
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1243.8 906 72.5
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 0.0e+00 1243.0 887 71.0
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 0.0e+00 1239.6 898 71.8
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 0.0e+00 1238.8 901 69.6
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 0.0e+00 1237.6 897 71.9
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 0.0e+00 1236.9 837 75.4
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 0.0e+00 1235.7 837 74.8
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 0.0e+00 1233.0 840 76.3
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 0.0e+00 1228.0 832 74.9
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 0.0e+00 1227.2 864 74.2
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 0.0e+00 1225.7 865 73.4
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1224.9 897 71.3
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 0.0e+00 1224.5 876 72.8
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 0.0e+00 1221.1 898 70.7
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 0.0e+00 1220.7 893 71.1
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 0.0e+00 1220.3 893 72.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1218.0 902 72.2
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1216.8 841 75.4
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 0.0e+00 1216.4 839 75.6
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1216.1 838 75.5
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 0.0e+00 1214.9 867 70.1
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1214.5 839 75.4
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 0.0e+00 1214.1 855 75.3
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 0.0e+00 1213.4 886 71.0
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 0.0e+00 1213.0 902 72.1
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 0.0e+00 1211.4 894 71.0
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 0.0e+00 1211.1 894 70.5
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 0.0e+00 1211.1 835 75.8
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 0.0e+00 1210.3 894 70.9
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 0.0e+00 1209.9 870 72.2
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 0.0e+00 1206.8 864 71.8
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 0.0e+00 1202.6 897 70.3
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 0.0e+00 1202.2 887 71.1
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 0.0e+00 1200.3 868 73.2
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 0.0e+00 1197.2 832 75.5
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 0.0e+00 1194.5 901 70.8
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1193.3 843 74.5
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 0.0e+00 1192.2 876 71.5
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 0.0e+00 1192.2 887 70.7
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 0.0e+00 1191.4 842 74.0
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1191.0 861 71.8
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 0.0e+00 1187.9 868 71.8
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 0.0e+00 1181.8 867 71.9
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 0.0e+00 1174.1 897 67.0
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 0.0e+00 1161.0 903 69.1
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 0.0e+00 1160.6 885 69.2
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 0.0e+00 1141.3 830 69.8
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1131.7 871 66.5
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 0.0e+00 1121.3 870 66.8
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 0.0e+00 1119.4 835 66.6
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 0.0e+00 1118.6 838 68.5
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 0.0e+00 1114.4 879 68.8
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 0.0e+00 1113.2 903 67.7
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 0.0e+00 1109.0 826 66.3
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 0.0e+00 1105.9 836 67.8
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 0.0e+00 1097.8 901 65.9
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 0.0e+00 1096.3 845 67.6
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 0.0e+00 1095.1 855 64.9
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 0.0e+00 1092.0 898 66.1
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 0.0e+00 1080.1 887 63.8
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 6.2e-270 934.5 863 60.1
Sc16g0010030 Simmondsia chinensis HOM05D002281 ORTHO05D006774 3.4e-252 875.5 628 72.5
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.1e-247 860.5 852 54.2
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 1.5e-234 817.0 477 82.0
Sabra19G0037700 Salix brachista HOM05D002281 ORTHO05D006774 1.9e-234 816.6 624 71.2
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 4.1e-229 798.9 829 51.3
Hma1.2p1_0123F.1_g058110 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.2e-228 797.3 571 70.8
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 1.6e-228 797.0 508 76.0
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 8.0e-217 758.1 830 49.2
ClCG03G011380 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.3e-206 724.2 525 75.0
Hma1.2p1_0123F.1_g058100 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.1e-200 704.5 538 67.3
CDE02G2074 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.6e-185 652.9 495 70.3
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 1.1e-184 651.4 857 44.0
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 8.4e-182 641.7 848 42.1
Haze_04484 Corylus avellana HOM05D002281 ORTHO05D006774 3.2e-173 613.2 577 59.8
vmacro19967 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 3.1e-160 570.1 471 68.4
CBR_g7996 Chara braunii HOM05D002281 ORTHO05D006774 1.3e-150 538.1 862 37.0
Rhsim05G0169000 Rhododendron simsii HOM05D002281 ORTHO05D006774 2.0e-143 514.2 430 63.7
Cc00_g32050 Coffea canephora HOM05D002281 ORTHO05D006774 1.2e-124 451.8 371 69.8
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 3.1e-104 384.0 282 71.3
QL03p033056 Quercus lobata HOM05D002281 ORTHO05D006774 1.6e-95 355.1 208 82.7
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 7.3e-93 346.3 201 82.1
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.3e-91 341.3 289 59.2
Cpa.g.sc51.36 Carica papaya HOM05D002281 ORTHO05D006774 4.0e-91 340.5 310 67.4
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 8.3e-89 332.8 255 68.2
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.5e-85 322.0 233 73.0
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 2.3e-83 314.7 225 69.3
CiPaw.07G076900 Carya illinoinensis HOM05D002281 ORTHO05D006774 4.0e-83 313.9 190 82.1
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 2.0e-82 311.6 196 77.0
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 7.0e-80 303.1 220 71.4
AL685U10020 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 3.4e-58 231.1 137 86.9
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 1.3e-49 202.6 164 64.6
Actinidia39977 Actinidia chinensis HOM05D002281 ORTHO05D006774 3.5e-47 194.5 144 66.7
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 2.3e-46 191.8 129 71.3
ClCG03G011370 Citrullus lanatus HOM05D002281 ORTHO05D006774 6.7e-46 190.3 111 82.0
vmacro19968 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 2.8e-44 184.9 113 76.1
Sopen01g022760 Solanum pennellii HOM05D002281 ORTHO05D006774 1.1e-37 162.9 197 48.2
QL03p032920 Quercus lobata HOM05D002281 ORTHO05D006774 4.3e-37 161.0 99 82.8
QL03p033074 Quercus lobata HOM05D002281 ORTHO05D006774 6.9e-35 153.7 93 84.9
Cpa.g.sc51.35 Carica papaya HOM05D002281 ORTHO05D006774 1.3e-33 149.4 87 82.8
BolC1t05755H Brassica oleracea HOM05D002281 ORTHO05D006774 1.4e-24 119.4 69 94.2
Solyc01g015200.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.4e-22 112.8 167 40.7
Solyc01g016930.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.7e-20 104.8 82 65.9
Solyc01g013970.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.5e-18 99.4 88 53.4
RcHm_v2.0_Chr1g0330901 Rosa chinensis HOM05D002281 ORTHO05D006774 3.4e-18 98.2 61 75.4
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 8.5e-17 93.6 63 69.8
Solyc01g014000.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.1e-16 93.2 74 62.2
Solyc01g016920.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.6e-15 89.4 53 81.1
Actinidia39976 Actinidia chinensis HOM05D002281 ORTHO05D006774 4.4e-13 81.3 59 71.2
Solyc01g016870.1 Solanum lycopersicum HOM05D002281 ORTHO05D006774 3.7e-12 78.2 49 77.6
Cre12.g497350 Chlamydomonas reinhardtii HOM05D002281 ORTHO05D006774 9.1e-11 73.6 230 26.5
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 9.1e-11 73.6 72 51.4
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 9.1e-11 73.6 72 51.4
BraA01t04528Z Brassica rapa HOM05D002281 ORTHO05D006774 4.5e-10 71.2 49 77.6
BolC1t05758H Brassica oleracea HOM05D002281 ORTHO05D006774 2.2e-09 68.9 42 81.0
ClCG10G018100 Citrullus lanatus HOM05D006596 ORTHO05D008497 1.2e-07 63.2 200 25.5
MELO3C009563.2 Cucumis melo HOM05D006596 ORTHO05D008497 3.6e-07 61.6 228 25.0
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 4.7e-07 61.2 84 46.4
TPR.G31597 Trifolium pratense HOM05D002281 ORTHO05D006774 4.7e-07 61.2 40 67.5
BcaC09g48027 Brassica carinata HOM05D000141 ORTHO05D023630 4.0e-06 58.2 31 93.5
FvH4_6g01352 Fragaria vesca HOM05D002281 ORTHO05D006774 8.8e-06 57.0 40 65.0


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